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Conroy, Andrea L; Datta, Dibyadyuti; Hoffmann, Angelika; Wassmer, Samuel C; (2023) The kidney-brain pathogenic axis in severe falciparum malaria. Trends in parasitology, 39 (3). pp. 191-199. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2023.01.005

Cuypers, Wim L; Meysman, Pieter; Weill, François-Xavier; Hendriksen, Rene S; Beyene, Getenet; Wain, John; Nair, Satheesh; Chattaway, Marie A; Perez-Sepulveda, Blanca M; Ceyssens, Pieter-Jan; +19 more... de Block, Tessa; Lee, Winnie WY; Pardos de la Gandara, Maria; Kornschober, Christian; Moran-Gilad, Jacob; Veldman, Kees T; Cormican, Martin; Torpdahl, Mia; Fields, Patricia I; Černý, Tomáš; Hardy, Liselotte; Tack, Bieke; Mellor, Kate C; Thomson, Nicholas; Dougan, Gordon; Deborggraeve, Stijn; Jacobs, Jan; Laukens, Kris; Van Puyvelde, Sandra; (2023) A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia. Nature communications, 14 (1). 3517-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-38902-x

D'Addiego, Jake; Elaldi, Nazif; Wand, Nadina; Osman, Karen; Bagci, Binnur Koksal; Kennedy, Emma; Pektas, Ayse Nur; Hart, Eilish; Slack, Gillian; Hewson, Roger; (2023) Investigating the effect of ribavirin treatment on genetic mutations in Crimean-Congo haemorrhagic fever virus (CCHFV) through next-generation sequencing. Journal of medical virology, 95 (2). e28548-. ISSN 0146-6615 DOI: https://doi.org/10.1002/jmv.28548

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Eales, Oliver; Page, Andrew J; Tang, Sonja N; Walters, Caroline E; Wang, Haowei; Haw, David; Trotter, Alexander J; Le Viet, Thanh; Foster-Nyarko, Ebenezer; Prosolek, Sophie; +12 more... Atchison, Christina; Ashby, Deborah; Cooke, Graham; Barclay, Wendy; Donnelly, Christl A; O'Grady, Justin; Volz, Erik; The Covid-Genomics Uk Cog-Uk Consortium; Darzi, Ara; Ward, Helen; Elliott, Paul; Riley, Steven; (2023) The use of representative community samples to assess SARS-CoV-2 lineage competition: Alpha outcompetes Beta and wild-type in England from January to March 2021. Microbial genomics, 9 (2). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000887

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Eckold, Clare; van Doorn, Cassandra LR; Ruslami, Rovina; Ronacher, Katharina; Riza, Anca-Lelia; van Veen, Suzanne; Lee, Ji-Sook; Kumar, Vinod; Kerry-Barnard, Sarah; Malherbe, Stephanus T; +16 more... Kleynhans, Léanie; Stanley, Kim; Joosten, Simone A; Critchley, Julia A; Hill, Philip C; van Crevel, Reinout; Wijmenga, Cisca; Haks, Mariëlle C; Ioana, Mihai; Alisjahbana, Bachti; Walzl, Gerhard; Ottenhoff, Tom HM; Dockrell, Hazel M; Vianello, Eleonora; Cliff, Jacqueline M; TANDEM Consortium$; (2023) Impaired resolution of blood transcriptomes through tuberculosis treatment with diabetes comorbidity. Clinical and translational medicine, 13 (9). e1375-. ISSN 2001-1326 DOI: https://doi.org/10.1002/ctm2.1375

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Malpartida-Cardenas, Kenny; Moser, Nicolas; Ansah, Felix; Pennisi, Ivana; Ahu Prah, Diana; Amoah, Linda Eva; Awandare, Gordon; Hafalla, Julius Clemence R; Cunnington, Aubrey; Baum, Jake; +2 more... Rodriguez-Manzano, Jesus; Georgiou, Pantelis; (2023) Sensitive Detection of Asymptomatic and Symptomatic Malaria with Seven Novel Parasite-Specific LAMP Assays and Translation for Use at Point-of-Care. Microbiology spectrum, 11 (3). e0522222-. ISSN 2165-0497 DOI: https://doi.org/10.1128/spectrum.05222-22

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Marlais, Tegwen; Bickford-Smith, Jack; Talavera-López, Carlos; Le, Hai; Chowdhury, Fatima; Miles, Michael A; (2023) A comparative 'omics' approach for prediction of candidate Strongyloides stercoralis diagnostic coproantigens. PLoS neglected tropical diseases, 17 (4). e0010777-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0010777

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Turkiewicz, Anna; Manko, Emilia; Oresegun, Damiola R; Nolder, Debbie; Spadar, Anton; Sutherland, Colin J; Cox-Singh, Janet; Moon, Robert W; Lau, Yee-Ling; Campino, Susana; +1 more... Clark, Taane G; (2023) Population genetic analysis of Plasmodium knowlesi reveals differential selection and exchange events between Borneo and Peninsular sub-populations. Scientific reports, 13 (1). 2142-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-023-29368-4

Vallintine, Tansy; van Ooij, Christiaan; (2023) Distribution of malaria parasite-derived phosphatidylcholine in the infected erythrocyte. mSphere, 8 (5). e0013123-. ISSN 2379-5042 DOI: https://doi.org/10.1128/msphere.00131-23

Vallintine, Tansy; van Ooij, Christiaan; (2023) Timing of dense granule biogenesis in asexual malaria parasites. Microbiology, 169 (8). ISSN 1350-0872 DOI: https://doi.org/10.1099/mic.0.001389

Van Bocxlaer, Katrien; Dixon, Jodie; Platteeuw, Johannes J; Van Den Heuvel, Dennie; Mcarthur, Kerri-Nicola; Harris, Andy; Alavijeh, Mo; Croft, Simon L; Yardley, Vanessa; (2023) Efficacy of oleylphosphocholine in experimental cutaneous leishmaniasis. The Journal of antimicrobial chemotherapy, 78 (7). pp. 1723-1731. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dkad162

Van Puyvelde, Sandra; de Block, Tessa; Sridhar, Sushmita; Bawn, Matt; Kingsley, Robert A; Ingelbeen, Brecht; Beale, Mathew A; Barbé, Barbara; Jeon, Hyon Jin; Mbuyi-Kalonji, Lisette; +38 more... Phoba, Marie-France; Falay, Dadi; Martiny, Delphine; Vandenberg, Olivier; Affolabi, Dissou; Rutanga, Jean Pierre; Ceyssens, Pieter-Jan; Mattheus, Wesley; Cuypers, Wim L; van der Sande, Marianne AB; Park, Se Eun; Kariuki, Simon; Otieno, Kephas; Lusingu, John PA; Mbwana, Joyce R; Adjei, Samuel; Sarfo, Anima; Agyei, Seth O; Asante, Kwaku P; Otieno, Walter; Otieno, Lucas; Tahita, Marc C; Lompo, Palpouguini; Hoffman, Irving F; Mvalo, Tisungane; Msefula, Chisomo; Hassan-Hanga, Fatimah; Obaro, Stephen; Mackenzie, Grant; Deborggraeve, Stijn; Feasey, Nicholas; Marks, Florian; MacLennan, Calman A; Thomson, Nicholas R; Jacobs, Jan; Dougan, Gordon; Kariuki, Samuel; Lunguya, Octavie; (2023) A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan Africa. Nature communications, 14 (1). 6392-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-41152-6

Walker, Joseph; Chaguza, Chrispin; Grubaugh, Nathan D; Carey, Megan; Baker, Stephen; Khan, Kamran; Bogoch, Isaac I; Pitzer, Virginia E; (2023) Assessing the global risk of typhoid outbreaks caused by extensively drug resistant Salmonella Typhi. Nature communications, 14 (1). 6502-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-42353-9

Ward, Kurt E; Christensen, Peter; Racklyeft, Annie; Dhingra, Satish K; Chua, Adeline CY; Remmert, Caroline; Suwanarusk, Rossarin; Matheson, Jessica; Blackman, Michael J; Kaneko, Osamu; +8 more... Kyle, Dennis E; Lee, Marcus CS; Moon, Robert W; Snounou, Georges; Rénia, Laurent; Fidock, David A; Russell, Bruce; Bifani, Pablo; (2023) Integrative Genetic Manipulation of Plasmodium cynomolgi Reveals Multidrug Resistance-1 Y976F Associated With Increased In Vitro Susceptibility to Mefloquine. The Journal of infectious diseases, 227 (10). pp. 1121-1126. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiac469

Watson, Quentin D; Carias, Lenore L; Malachin, Alyssa; Redinger, Karli R; Bosch, Jürgen; Bardelli, Martino; Baldor, Lea; Feufack-Donfack, Lionel Brice; Popovici, Jean; Moon, Robert W; +3 more... Draper, Simon J; Zimmerman, Peter A; King, Christopher L; (2023) Human monoclonal antibodies inhibit invasion of transgenic Plasmodium knowlesi expressing Plasmodium vivax Duffy binding protein. Malaria journal, 22 (1). 369-. ISSN 1475-2875 DOI: https://doi.org/10.1186/s12936-023-04766-1

Wick, Ryan R; Judd, Louise M; Holt, Kathryn E; (2023) Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing. PLOS Computational Biology, 19 (3). e1010905-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1010905

Yahiya, Sabrina; Saunders, Charlie N; Hassan, Sarah; Straschil, Ursula; Fischer, Oliver J; Rueda-Zubiaurre, Ainoa; Haase, Silvia; Vizcay-Barrena, Gema; Famodimu, Mufuliat Toyin; Jordan, Sarah; +5 more... Delves, Michael J; Tate, Edward W; Barnard, Anna; Fuchter, Matthew J; Baum, Jake; (2023) A novel class of sulphonamides potently block malaria transmission by targeting a Plasmodium vacuole membrane protein. Disease models & mechanisms, 16 (2). dmm049950-. ISSN 1754-8403 DOI: https://doi.org/10.1242/dmm.049950

Zhou, Kai; Xue, Chun-Xu; Xu, Tingting; Shen, Ping; Wei, Sha; Wyres, Kelly L; Lam, Margaret MC; Liu, Jinquan; Lin, Haoyun; Chen, Yunbo; +3 more... Holt, Kathryn E; BRICS Working Group; Xiao, Yonghong; (2023) A point mutation in recC associated with subclonal replacement of carbapenem-resistant Klebsiella pneumoniae ST11 in China. Nature communications, 14 (1). 2464-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-023-38061-z

Záhonová, Kristína; Low, Ross S; Warren, Christopher J; Cantoni, Diego; Herman, Emily K; Yiangou, Lyto; Ribeiro, Cláudia A; Phanprasert, Yasinee; Brown, Ian R; Rueckert, Sonja; +9 more... Baker, Nicola L; Tachezy, Jan; Betts, Emma L; Gentekaki, Eleni; van der Giezen, Mark; Clark, C Graham; Jackson, Andrew P; Dacks, Joel B; Tsaousis, Anastasios D; (2023) Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis. Current Biology, 33 (12). 2449-2464.e8. ISSN 0960-9822 DOI: https://doi.org/10.1016/j.cub.2023.05.025

van Schalkwyk, Donelly A; Pratt, Sade; Nolder, Debbie; Stewart, Lindsay B; Liddy, Helen; Muwanguzi-Karugaba, Julian; Beshir, Khalid B; Britten, Dawn; Victory, Emma; Rogers, Claire; +7 more... Millard, James; Brown, Michael; Nabarro, Laura E; Taylor, Andrew; Young, Bernadette C; Chiodini, Peter L; Sutherland, Colin J; (2023) Treatment Failure in a UK Malaria Patient Harboring Genetically Variant Plasmodium falciparum From Uganda With Reduced In Vitro Susceptibility to Artemisinin and Lumefantrine. Clinical Infectious Diseases, 78 (2). pp. 445-452. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciad724

Fornace, Kimberly M; Johnson, Emilia; Moreno Leirana, Marta; Hardy, Andy; Carrasco-Escobar, Gabriel; (2023) Leveraging Earth observation data for surveillance of vector-borne diseases in changing environments. In: Fornace, Kimberly; Conn, Jan; Sallum, Maria Anice; Moreira Chaves, Leonardo Suveges; Logan, James, (eds.) Planetary health approaches to understand and control vector-borne diseases. Ecology and Control of Vector-borne Diseases, 8 . BRILL | Wageningen Academic. ISBN 978-90-04-68768-4 DOI: https://doi.org/10.3920/9789004688650

Byrne, Isabel; Dumont, Elin; Nelli, Luca; Stresman, Gillian; Drakeley, Chris; (2023) Sero-epidemiology to support decision-making for malaria elimination. In: American Society for Tropical Medicine and Hygiene: TropMed 2022, 17-22 November 2022, Seattle, United States. DOI: https://doi.org/10.17037/PUBS.04669054

Burns, K; (2023) Development of a Glycoconjugate Vaccine Against Group A Streptococcus (GAS). PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670758

Butkeviciute, E; (2023) Studies on innate immune responses to Mycobacterium bovis BCG. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670893

Edwards, RTM; (2023) Development of a gene editing platform for sand fly vectors of Leishmania through CRISPR-Cas9 genetic modification targeting genes associated with olfaction. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671278

Gómez González, PJ; (2023) Analysis of Mycobacterium tuberculosis ‘omics data to inform on loci linked to drug resistance, pathogenicity and virulence. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670763

Higgins, MCW; (2023) Developing an RPA-based Molecular Barcoding Tool for Plasmodium Malaria. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670986

Hong, G; (2023) Investigation of Campylobacter jejuni Modulation of Host Defence Mechanisms in Human Intestinal Epithelial Cells. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671312

Ibrahim, A; (2023) From genome to function: A genomic investigation into understudied populations of the malaria parasites Plasmodium malariae and P.vivax. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670765

Napier, G; (2023) Using whole genome sequencing data to identify strain-types, transmission enhancers and novel drug resistance mutations of Mycobacterium tuberculosis. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670881

Osborne, AA; (2023) A multifaceted investigation of the genomics of malaria, from parasite to host, using next-generation sequencing technologies. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671412

Oulton, TE; (2023) Development and validation of serological assays to evaluate malaria transmission. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670916

Roscoe, RB; (2023) Characterising kinetoplastid pantothenate kinase, a multifunctional enzyme of the CoA biosynthesis pathway. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670994

Spadar, A; (2023) Understanding the genetic diversity, antimicrobial resistance, and virulence of Klebsiella pneumoniae bacteria. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670853

Sparkes, PC; (2023) Exploring energy metabolism in male and female Plasmodium falciparum gametocytes. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04671600

Tunstall, T; (2023) Using Machine Learning to Anticipate Antimicrobial Resistance in Mycobacterium Tuberculosis. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670981

Ward, D; (2023) Zika virus surveillance in human and mosquito populations in Cabo Verde – exploring molecular and serological tools for the surveillance of emerging infectious diseases. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04670855