LSHTM Organisational Structure (62309)

Faculty of Infectious and Tropical Diseases (19963)

Department of Infection Biology (5999)

Dept of Immunology and Infection (-2019) (955)

Dept of Pathogen Molecular Biology (-2019) (1083) Month Authors/Creators Item Type Full Text

December 2023

Leveraging Earth observation data for surveillance of vector-borne diseases in changing environments. (2023) Fornace, Kimberly M; Johnson, Emilia; Moreno Leirana, Marta; Hardy, Andy; Carrasco-Escobar, Gabriel

DNDI-6174 is a preclinical candidate for visceral leishmaniasis that targets the cytochrome bc1. (2023) Braillard, Stéphanie; Keenan, Martine; Breese, Karen J; Heppell, Jacob; Abbott, Michael; Islam, Rafiqul; Shackleford, David M; Katneni, Kasiram; Crighton, Elly; Chen, Gong; Patil, Rahul; Lee, Given; White, Karen L; Carvalho, Sandra; Wall, Richard J; Chemi, Giulia; Zuccotto, Fabio; González, Silvia; Marco, Maria; Deakyne, Julianna; Standing, David; Brunori, Gino; Lyon, Jonathan J; Castañeda-Casado, Pablo; Camino, Isabel; Martinez Martinez, Maria S; Zulfiqar, Bilal; Avery, Vicky M; Feijens, Pim-Bart; Van Pelt, Natascha; Matheeussen, An; Hendrickx, Sarah; Maes, Louis; Caljon, Guy; Yardley, Vanessa; Wyllie, Susan; Charman, Susan A; Chatelain, Eric

Short-course combination treatment for experimental chronic Chagas disease. (2023) González, Silvia; Wall, Richard J; Thomas, John; Braillard, Stephanie; Brunori, Gino; Camino Díaz, Isabel; Cantizani, Juan; Carvalho, Sandra; Castañeda Casado, Pablo; Chatelain, Eric; Cotillo, Ignacio; Fiandor, Jose M; Francisco, Amanda Fortes; Grimsditch, David; Keenan, Martine; Kelly, John M; Kessler, Albane; Luise, Chiara; Lyon, Jon J; MacLean, Lorna; Marco, Maria; Martin, J Julio; Martinez Martinez, Maria S; Paterson, Christy; Read, Kevin D; Santos-Villarejo, Angel; Zuccotto, Fabio; Wyllie, Susan; Miles, Tim J; De Rycker, Manu

Identification of a non-exported Plasmepsin V substrate that functions in the parasitophorous vacuole of malaria parasites. (2023) Fréville, Aline; Ressurreição, Margarida; van Ooij, Christiaan

Human monoclonal antibodies inhibit invasion of transgenic Plasmodium knowlesi expressing Plasmodium vivax Duffy binding protein. (2023) Watson, Quentin D; Carias, Lenore L; Malachin, Alyssa; Redinger, Karli R; Bosch, Jürgen; Bardelli, Martino; Baldor, Lea; Feufack-Donfack, Lionel Brice; Popovici, Jean; Moon, Robert W; Draper, Simon J; Zimmerman, Peter A; King, Christopher L

COVID-19 vaccine effectiveness against severe COVID-19 requiring oxygen therapy, invasive mechanical ventilation, and death in Japan: A multicenter case-control study (MOTIVATE study). (2023) Arashiro, Takeshi; Miwa, Maki; Nakagawa, Hidenori; Takamatsu, Junpei; Oba, Kunihiro; Fujimi, Satoshi; Kikuchi, Hitoshi; Iwasawa, Takamasa; Kanbe, Fumiko; Oyama, Keisuke; Kanai, Masayuki; Ogata, Yoshitaka; Asakura, Takanori; Asami, Takahiro; Mizuno, Keiko; Sugita, Manabu; Jinta, Torahiko; Nishida, Yusuke; Kato, Hideaki; Atagi, Kazuaki; Higaki, Taiki; Nakano, Yoshio; Tsutsumi, Takeya; Doi, Kent; Okugawa, Shu; Ueda, Akihiro; Nakamura, Akira; Yoshida, Toru; Shimada-Sammori, Kaoru; Shimizu, Keiki; Fujita, Yasuo; Okochi, Yasumi; Tochitani, Kentaro; Nakanishi, Asuka; Rinka, Hiroshi; Taniyama, Daisuke; Yamaguchi, Asase; Uchikura, Toshio; Matsunaga, Maiko; Aono, Hiromi; Hamaguchi, Masanari; Motoda, Kentaro; Nakayama, Sohei; Yamamoto, Kei; Oka, Hideaki; Tanaka, Katsushi; Inoue, Takeshi; Kobayashi, Mieko; Fujitani, Shigeki; Tsukahara, Maki; Takeda, Saki; Stucky, Ashley; Suzuki, Tadaki; Smith, Chris; Hibberd, Martin; Ariyoshi, Koya; Fujino, Yuji; Arima, Yuzo; Takeda, Shinhiro; Hashimoto, Satoru; Suzuki, Motoi

A computational method for predicting the most likely evolutionary trajectories in the stepwise accumulation of resistance mutations. (2023) Eccleston, Ruth Charlotte; Manko, Emilia; Campino, Susana; Clark, Taane G; Furnham, Nicholas

November 2023

Treatment Failure in a UK Malaria Patient Harboring Genetically Variant Plasmodium falciparum From Uganda With Reduced In Vitro Susceptibility to Artemisinin and Lumefantrine. (2023) van Schalkwyk, Donelly A; Pratt, Sade; Nolder, Debbie; Stewart, Lindsay B; Liddy, Helen; Muwanguzi-Karugaba, Julian; Beshir, Khalid B; Britten, Dawn; Victory, Emma; Rogers, Claire; Millard, James; Brown, Michael; Nabarro, Laura E; Taylor, Andrew; Young, Bernadette C; Chiodini, Peter L; Sutherland, Colin J

Identification of the PfK13 mutations R561H and P441L in the Democratic Republic of Congo. (2023) Mesia Kahunu, Gauthier; Wellmann Thomsen, Sarah; Wellmann Thomsen, Louise; Muhindo Mavoko, Hypolite; Mitashi Mulopo, Patrick; Filtenborg Hocke, Emma; Mandoko Nkoli, Papy; Baraka, Vito; Minja, Daniel TR; Mousa, Andria; Roper, Cally; Mbongi Moke, Destin; Mumba Ngoyi, Dieudonné; Mukomena Sompwe, Eric; Muyembe Tanfum, Jean Jacques; Hansson, Helle; Alifrangis, Michael

62. How does weaning age affect the microbiome of piglets fed zinc oxide free diets? (2023) Taylor, J; Mulvenna, CC; Strain, A; Gundogdu, O; Corcionivoschi, N; Muns, R

Cardiac Abnormalities in a Predictive Mouse Model of Chagas Disease. (2023) Francisco, Amanda Fortes; Sousa, Giovane R; Vaughan, Mhairi; Langston, Harry; Khan, Archie; Jayawardhana, Shiromani; Taylor, Martin C; Lewis, Michael D; Kelly, John M

Benznidazole treatment leads to DNA damage in Trypanosoma cruzi and the persistence of rare widely dispersed non-replicative amastigotes in mice. (2023) Jayawardhana, Shiromani; Ward, Alexander I; Francisco, Amanda F; Lewis, Michael D; Taylor, Martin C; Kelly, John M; Olmo, Francisco

Characterization of Rotavirus Strains Responsible for Breakthrough Diarrheal Diseases among Zambian Children Using Whole Genome Sequencing. (2023) Mwape, Innocent; Laban, Natasha Makabilo; Chibesa, Kennedy; Moono, Andrew; Silwamba, Suwilanji; Malisheni, Moffat Mulemena; Chisenga, Caroline; Chauwa, Adriace; Simusika, Paul; Phiri, Mabvuto; Simuyandi, Michelo; Chilengi, Roma; De Beer, Corena; Ojok, David picture_as_pdf

Rapid profiling of Plasmodium parasites from genome sequences to assist malaria control. (2023) Phelan, Jody E; Turkiewicz, Anna; Manko, Emilia; Thorpe, Joseph; Vanheer, Leen N; van de Vegte-Bolmer, Marga; Ngoc, Nguyen Thi Hong; Binh, Nguyen Thi Huong; Thieu, Nguyen Quang; Gitaka, Jesse; Nolder, Debbie; Beshir, Khalid B; Dombrowski, Jamille G; Di Santi, Silvia Maria; Bousema, Teun; Sutherland, Colin J; Campino, Susana; Clark, Taane G

A molnupiravir-associated mutational signature in global SARS-CoV-2 genomes. (2023) Sanderson, Theo; Hisner, Ryan; Donovan-Banfield, I'ah; Hartman, Hassan; Løchen, Alessandra; Peacock, Thomas P; Ruis, Christopher

October 2023

Evidence for a role of Anopheles stephensi in the spread of drug- and diagnosis-resistant malaria in Africa. (2023) Emiru, Tadele; Getachew, Dejene; Murphy, Maxwell; Sedda, Luigi; Ejigu, Legesse Alamerie; Bulto, Mikiyas Gebremichael; Byrne, Isabel; Demisse, Mulugeta; Abdo, Melat; Chali, Wakweya; Elliott, Aaron; Vickers, Eric Neubauer; Aranda-Díaz, Andrés; Alemayehu, Lina; Behaksera, Sinknesh W; Jebessa, Gutema; Dinka, Hunduma; Tsegaye, Tizita; Teka, Hiwot; Chibsa, Sheleme; Mumba, Peter; Girma, Samuel; Hwang, Jimee; Yoshimizu, Melissa; Sutcliffe, Alice; Taffese, Hiwot Solomon; Bayissa, Gudissa Aseffa; Zohdy, Sarah; Tongren, Jon Eric; Drakeley, Chris; Greenhouse, Bryan; Bousema, Teun; Tadesse, Fitsum G

Exploring energy metabolism in male and female Plasmodium falciparum gametocytes. (2023) Sparkes, PC

Maternal colonization and early-onset neonatal bacterial sepsis in the Gambia, West Africa: a genomic analysis of vertical transmission. (2023) Okomo, Uduak A; Darboe, Saffiatou; Bah, Saikou Y; Ayorinde, Abigail; Jarju, Sheikh; Sesay, Abdul Karim; Kebbeh, Ngange; Gai, Abdou; Dibbasey, Tida; Grey-Johnson, Mary; Le Doare, Kirsty; Holt, Kathryn E; Lawn, Joy E; Kampmann, Beate

Protocol for a prospective observational cohort study of cutaneous leishmaniasis in Ethiopia. (2023) Mohammed, Amel Beshir; Mohammed, Fewzia Shikur; Zewdu, Feleke Tilahun; Nigusse, Shimelis Doni; Hailemichael, Yohannes; Cherkose, Teklu; Alemu, Abebaw Yeshambel; Molla, Eshetu; Bobosha, Kidist; Yardley, Vanessa; Mosweu, Iris; Kaba, Mirgissa; Pitt, Catherine; Allen, Elizabeth; Lambert, Saba Maria; Marks, Michael; Walker, Stephen L; Gadisa, Endalamaw; SHARP collaboration picture_as_pdf

A patatin-like phospholipase is important for mitochondrial function in malaria parasites. (2023) Pietsch, Emma; Ramaprasad, Abhinay; Bielfeld, Sabrina; Wohlfarter, Yvonne; Maco, Bohumil; Niedermüller, Korbinian; Wilcke, Louisa; Kloehn, Joachim; Keller, Markus A; Soldati-Favre, Dominique; Blackman, Michael J; Gilberger, Tim-Wolf; Burda, Paul-Christian

A genomic appraisal of invasive Salmonella Typhimurium and associated antibiotic resistance in sub-Saharan Africa. (2023) Van Puyvelde, Sandra; de Block, Tessa; Sridhar, Sushmita; Bawn, Matt; Kingsley, Robert A; Ingelbeen, Brecht; Beale, Mathew A; Barbé, Barbara; Jeon, Hyon Jin; Mbuyi-Kalonji, Lisette; Phoba, Marie-France; Falay, Dadi; Martiny, Delphine; Vandenberg, Olivier; Affolabi, Dissou; Rutanga, Jean Pierre; Ceyssens, Pieter-Jan; Mattheus, Wesley; Cuypers, Wim L; van der Sande, Marianne AB; Park, Se Eun; Kariuki, Simon; Otieno, Kephas; Lusingu, John PA; Mbwana, Joyce R; Adjei, Samuel; Sarfo, Anima; Agyei, Seth O; Asante, Kwaku P; Otieno, Walter; Otieno, Lucas; Tahita, Marc C; Lompo, Palpouguini; Hoffman, Irving F; Mvalo, Tisungane; Msefula, Chisomo; Hassan-Hanga, Fatimah; Obaro, Stephen; Mackenzie, Grant; Deborggraeve, Stijn; Feasey, Nicholas; Marks, Florian; MacLennan, Calman A; Thomson, Nicholas R; Jacobs, Jan; Dougan, Gordon; Kariuki, Samuel; Lunguya, Octavie

Assessing the global risk of typhoid outbreaks caused by extensively drug resistant Salmonella Typhi. (2023) Walker, Joseph; Chaguza, Chrispin; Grubaugh, Nathan D; Carey, Megan; Baker, Stephen; Khan, Kamran; Bogoch, Isaac I; Pitzer, Virginia E

September 2023

Bis-6-amidino-benzothiazole Derivative that Cures Experimental Stage 1 African Trypanosomiasis with a Single Dose. (2023) Racané, Livio; Ptiček, Lucija; Kostrun, Sanja; Raić-Malić, Silvana; Taylor, Martin Craig; Delves, Michael; Alsford, Sam; Olmo, Francisco; Francisco, Amanda Fortes; Kelly, John M

Assessing the impact of the "malaria supporters project" intervention to malaria control in the Brazilian Amazon: an interrupted time-series analysis. (2023) Garcia, Klauss Kleydmann Sabino; Soremekun, Seyi; Bottomley, Christian; Abrahão, Amanda Amaral; de Miranda, Cristiano Barreto; Drakeley, Chris; Ramalho, Walter Massa; Siqueira, André M

Temporal stability and community assembly mechanisms in healthy broiler cecum. (2023) Ameer, Aqsa; Cheng, Youqi; Saleem, Farrukh; Uzma; McKenna, Aaron; Richmond, Anne; Gundogdu, Ozan; Sloan, William T; Javed, Sundus; Ijaz, Umer Zeeshan

Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes. (2023) Carey, Megan E; Dyson, Zoe A; Ingle, Danielle J; Amir, Afreenish; Aworh, Mabel K; Chattaway, Marie Anne; Chew, Ka Lip; Crump, John A; Feasey, Nicholas A; Howden, Benjamin P; Keddy, Karen H; Maes, Mailis; Parry, Christopher M; Van Puyvelde, Sandra; Webb, Hattie E; Afolayan, Ayorinde Oluwatobiloba; Alexander, Anna P; Anandan, Shalini; Andrews, Jason R; Ashton, Philip M; Basnyat, Buddha; Bavdekar, Ashish; Bogoch, Isaac I; Clemens, John D; da Silva, Kesia Esther; De, Anuradha; de Ligt, Joep; Diaz Guevara, Paula Lucia; Dolecek, Christiane; Dutta, Shanta; Ehlers, Marthie M; Francois Watkins, Louise; Garrett, Denise O; Godbole, Gauri; Gordon, Melita A; Greenhill, Andrew R; Griffin, Chelsey; Gupta, Madhu; Hendriksen, Rene S; Heyderman, Robert S; Hooda, Yogesh; Hormazabal, Juan Carlos; Ikhimiukor, Odion O; Iqbal, Junaid; Jacob, Jobin John; Jenkins, Claire; Jinka, Dasaratha Ramaiah; John, Jacob; Kang, Gagandeep; Kanteh, Abdoulie; Kapil, Arti; Karkey, Abhilasha; Kariuki, Samuel; Kingsley, Robert A; Koshy, Roshine Mary; Lauer, AC; Levine, Myron M; Lingegowda, Ravikumar Kadahalli; Luby, Stephen P; Mackenzie, Grant Austin; Mashe, Tapfumanei; Msefula, Chisomo; Mutreja, Ankur; Nagaraj, Geetha; Nagaraj, Savitha; Nair, Satheesh; Naseri, Take K; Nimarota-Brown, Susana; Njamkepo, Elisabeth; Okeke, Iruka N; Perumal, Sulochana Putli Bai; Pollard, Andrew J; Pragasam, Agila Kumari; Qadri, Firdausi; Qamar, Farah N; Rahman, Sadia Isfat Ara; Rambocus, Savitra Devi; Rasko, David A; Ray, Pallab; Robins-Browne, Roy; Rongsen-Chandola, Temsunaro; Rutanga, Jean Pierre; Saha, Samir K; Saha, Senjuti; Saigal, Karnika; Sajib, Mohammad Saiful Islam; Seidman, Jessica C; Shakya, Jivan; Shamanna, Varun; Shastri, Jayanthi; Shrestha, Rajeev; Sia, Sonia; Sikorski, Michael J; Singh, Ashita; Smith, Anthony M; Tagg, Kaitlin A; Tamrakar, Dipesh; Tanmoy, Arif Mohammed; Thomas, Maria; Thomas, Mathew S; Thomsen, Robert; Thomson, Nicholas R; Tupua, Siaosi; Vaidya, Krista; Valcanis, Mary; Veeraraghavan, Balaji; Weill, François-Xavier; Wright, Jackie; Dougan, Gordon; Argimón, Silvia; Keane, Jacqueline A; Aanensen, David M; Baker, Stephen; Holt, Kathryn E; Global Typhoid Genomics Consortium Group Authorship

Malaria misdiagnosis in the routine health system in Arba Minch area district in southwest Ethiopia: an implication for malaria control and elimination. (2023) Yigezu, Engida; Wondale, Biniam; Abebe, Daniel; Tamiru, Girum; Eligo, Nigatu; Lindtjørn, Bernt; Gadisa, Endalamaw; Tadesse, Fitsum Girma; Massebo, Fekadu picture_as_pdf

Shigella induces epigenetic reprogramming of zebrafish neutrophils. (2023) Gomes, Margarida C; Brokatzky, Dominik; Bielecka, Magdalena K; Wardle, Fiona C; Mostowy, Serge

Systems-level temporal immune-metabolic profile in Crimean-Congo hemorrhagic fever virus infection. (2023) Ambikan, Anoop T; Elaldi, Nazif; Svensson-Akusjärvi, Sara; Bagci, Binnur; Pektas, Ayse Nur; Hewson, Roger; Bagci, Gokhan; Arasli, Mehmet; Appelberg, Sofia; Mardinoglu, Adil; Sood, Vikas; Végvári, Ákos; Benfeitas, Rui; Gupta, Soham; Cetin, Ilhan; Mirazimi, Ali; Neogi, Ujjwal

Impaired resolution of blood transcriptomes through tuberculosis treatment with diabetes comorbidity. (2023) Eckold, Clare; van Doorn, Cassandra LR; Ruslami, Rovina; Ronacher, Katharina; Riza, Anca-Lelia; van Veen, Suzanne; Lee, Ji-Sook; Kumar, Vinod; Kerry-Barnard, Sarah; Malherbe, Stephanus T; Kleynhans, Léanie; Stanley, Kim; Joosten, Simone A; Critchley, Julia A; Hill, Philip C; van Crevel, Reinout; Wijmenga, Cisca; Haks, Mariëlle C; Ioana, Mihai; Alisjahbana, Bachti; Walzl, Gerhard; Ottenhoff, Tom HM; Dockrell, Hazel M; Vianello, Eleonora; Cliff, Jacqueline M; TANDEM Consortium$

Zoonotic malaria requires new policy approaches to malaria elimination. (2023) Fornace, Kimberly M; Drakeley, Chris J; Lindblade, Kim A; Jelip, Jenarun; Ahmed, Kamruddin

Comparison of collection methods for Phlebotomus argentipes sand flies to use in a molecular xenomonitoring system for the surveillance of visceral leishmaniasis. (2023) McIntyre-Nolan, Shannon; Kumar, Vijay; Mark-Carew, Miguella; Kumar, Kundan; Nightingale, Emily S; Dalla Libera Marchiori, Giorgia; Rogers, Matthew E; Kristan, Mojca; Campino, Susana; Medley, Graham F; Das, Pradeep; Cameron, Mary M

Relationship between molecular pathogen detection and clinical disease in febrile children across Europe: a multicentre, prospective observational study. (2023) Shah, Priyen; Voice, Marie; Calvo-Bado, Leonides; Rivero-Calle, Irene; Morris, Sophie; Nijman, Ruud; Broderick, Claire; De, Tisham; Eleftheriou, Irini; Galassini, Rachel; Khanijau, Aakash; Kolberg, Laura; Kolnik, Mojca; Rudzate, Aleksandra; Sagmeister, Manfred G; Schweintzger, Nina A; Secka, Fatou; Thakker, Clare; van der Velden, Fabian; Vermont, Clementien; Vincek, Katarina; Agyeman, Philipp KA; Cunnington, Aubrey J; De Groot, Ronald; Emonts, Marieke; Fidler, Katy; Kuijpers, Taco W; Mommert-Tripon, Marine; Brengel-Pesce, Karen; Mallet, Francois; Moll, Henriette; Paulus, Stéphane; Pokorn, Marko; Pollard, Andrew; Schlapbach, Luregn J; Shen, Ching-Fen; Tsolia, Maria; Usuf, Effua; van der Flier, Michiel; von Both, Ulrich; Yeung, Shunmay; Zavadska, Dace; Zenz, Werner; Wright, Victoria; Carrol, Enitan D; Kaforou, Myrsini; Martinon-Torres, Federico; Fink, Colin; Levin, Michael; Herberg, Jethro; PERFORM consortium

Preclinical data do not support the use of amiodarone or dronedarone as antiparasitic drugs for Chagas disease at the approved human dosing regimen. (2023) Francisco, Amanda F; Chen, Gong; Wang, Wen; Sykes, Melissa L; Escudié, Fanny; Scandale, Ivan; Olmo, Francisco; Shackleford, David M; Zulfiqar, Bilal; Kratz, Jadel M; Pham, Thao; Saunders, Jessica; Hu, Meiyu; Avery, Vicky M; Charman, Susan A; Kelly, John M; Chatelain, Eric

August 2023

Timing of dense granule biogenesis in asexual malaria parasites. (2023) Vallintine, Tansy; van Ooij, Christiaan

Distribution of malaria parasite-derived phosphatidylcholine in the infected erythrocyte. (2023) Vallintine, Tansy; van Ooij, Christiaan

Comparison of DNA concentration and bacterial pathogen PCR detection when using two DNA extraction kits for nasopharyngeal/oropharyngeal samples. (2023) Khan, Dam; Thomas, Shola-Able; Tientcheu, Peggy-Estelle; Suso, Sambou MS; Dupont, Christopher; Kwambana-Adams, Brenda; Mohammed, Nuredin Ibrahim; Nicol, Mark P; Antonio, Martin

Sequential roles for red blood cell binding proteins enable phased commitment to invasion for malaria parasites. (2023) Hart, Melissa N; Mohring, Franziska; DonVito, Sophia M; Thomas, James A; Muller-Sienerth, Nicole; Wright, Gavin J; Knuepfer, Ellen; Saibil, Helen R; Moon, Robert W

Corrigendum: 'Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae'. (2023) Foster-Nyarko, Ebenezer; Cottingham, Hugh; Wick, Ryan R; Judd, Louise M; Lam, Margaret MC; Wyres, Kelly L; Stanton, Thomas D; Tsang, Kara K; David, Sophia; Aanensen, David M; Brisse, Sylvain; Holt, Kathryn E

Spatial Clustering and Risk Factors for Malaria Infections and Marker of Recent Exposure to Plasmodium falciparum from a Household Survey in Artibonite, Haiti. (2023) Hamre, Karen ES; Dismer, Amber M; Rogier, Eric; van den Hoogen, Lotus L; Williamson, John; Kishore, Nishant; Travers, Anyess; McGee, Kathleen; Pierre, Baby; Fouché, Bernadette; Impoinvil, Daniel; Holmes, Kathleen; Stresman, Gillian; Druetz, Thomas; Eisele, Thomas P; Drakeley, Chris; Lemoine, Jean Frantz; Chang, Michelle A

The Effect of Previous Exposure to Malaria Infection and Clinical Malaria Episodes on the Immune Response to the Two-Dose Ad26.ZEBOV, MVA-BN-Filo Ebola Vaccine Regimen. (2023) Manno, Daniela; Patterson, Catriona; Drammeh, Abdoulie; Tetteh, Kevin; Kroma, Mattu Tehtor; Otieno, Godfrey Tuda; Lawal, Bolarinde Joseph; Soremekun, Seyi; Ayieko, Philip; Gaddah, Auguste; Kamara, Abu Bakarr; Baiden, Frank; Afolabi, Muhammed Olanrewaju; Tindanbil, Daniel; Owusu-Kyei, Kwabena; Ishola, David; Deen, Gibrilla Fadlu; Keshinro, Babajide; Njie, Yusupha; Samai, Mohamed; Lowe, Brett; Robinson, Cynthia; Leigh, Bailah; Drakeley, Chris; Greenwood, Brian; Watson-Jones, Deborah

Plasmodium berghei oocysts possess fatty acid synthesis and scavenging routes. (2023) Saeed, Sadia; Tremp, Annie Z; Dessens, Johannes T

Large-scale reference-free analysis of flavivirus sequences in Aedes aegypti whole genome DNA sequencing data. (2023) Spadar, Anton; Phelan, Jody E; Clark, Taane G; Campino, Susana

Trend analysis of malaria in urban settings in Ethiopia from 2014 to 2019. (2023) Teka, Hiwot; Golassa, Lemu; Medhin, Girmay; Balkew, Meshesha; Sisay, Chalachew; Gadisa, Endalamaw; Nekorchuk, Dawn M; Wimberly, Michael C; Tadesse, Fitsum Girma picture_as_pdf

A Pyridyl-Furan Series Developed from the Open Global Health Library Block Red Blood Cell Invasion and Protein Trafficking in Plasmodium falciparum through Potential Inhibition of the Parasite's PI4KIIIB Enzyme. (2023) Ling, Dawson B; Nguyen, William; Looker, Oliver; Razook, Zahra; McCann, Kirsty; Barry, Alyssa E; Scheurer, Christian; Wittlin, Sergio; Famodimu, Mufuliat Toyin; Delves, Michael J; Bullen, Hayley E; Crabb, Brendan S; Sleebs, Brad E; Gilson, Paul R

July 2023

Development of a gene editing platform for sand fly vectors of Leishmania through CRISPR-Cas9 genetic modification targeting genes associated with olfaction. (2023) Edwards, RTM

Investigation of Campylobacter jejuni Modulation of Host Defence Mechanisms in Human Intestinal Epithelial Cells. (2023) Hong, G

Novel Lipophilic Hydroxamates Based on Spirocarbocyclic Hydantoin Scaffolds with Potent Antiviral and Trypanocidal Activity. (2023) Pardali, Vasiliki; Giannakopoulou, Erofili; Mpekoulis, George; Tsopela, Vassilina; Panos, Georgios; Taylor, Martin C; Kelly, John M; Vassilaki, Niki; Zoidis, Grigoris

Recent advances in the treatment of tuberculosis. (2023) Motta, Ilaria; Boeree, Martin; Chesov, Dumitru; Dheda, Keertan; Günther, Gunar; Horsburgh, Charles Robert; Kherabi, Yousra; Lange, Christoph; Lienhardt, Christian; McIlleron, Helen M; Paton, Nicholas I; Stagg, Helen R; Thwaites, Guy; Udwadia, Zarir; Van Crevel, Reinout; Velásquez, Gustavo E; Wilkinson, Robert J; Guglielmetti, Lorenzo; Study group on Mycobacteria (ESGMYC) of the European Society of

A multifaceted investigation of the genomics of malaria, from parasite to host, using next-generation sequencing technologies. (2023) Osborne, AA

Vaccination with Plasmodium vivax Duffy-binding protein inhibits parasite growth during controlled human malaria infection. (2023) Hou, Mimi M; Barrett, Jordan R; Themistocleous, Yrene; Rawlinson, Thomas A; Diouf, Ababacar; Martinez, Francisco J; Nielsen, Carolyn M; Lias, Amelia M; King, Lloyd DW; Edwards, Nick J; Greenwood, Nicola M; Kingham, Lucy; Poulton, Ian D; Khozoee, Baktash; Goh, Cyndi; Hodgson, Susanne H; Mac Lochlainn, Dylan J; Salkeld, Jo; Guillotte-Blisnick, Micheline; Huon, Christèle; Mohring, Franziska; Reimer, Jenny M; Chauhan, Virander S; Mukherjee, Paushali; Biswas, Sumi; Taylor, Iona J; Lawrie, Alison M; Cho, Jee-Sun; Nugent, Fay L; Long, Carole A; Moon, Robert W; Miura, Kazutoyo; Silk, Sarah E; Chitnis, Chetan E; Minassian, Angela M; Draper, Simon J

Feature weighted models to address lineage dependency in drug-resistance prediction from Mycobacterium tuberculosis genome sequences. (2023) Billows, Nina; Phelan, Jody E; Xia, Dong; Peng, Yonghong; Clark, Taane G; Chang, Yu-Mei

Maternal time investment in caregiving activities to promote early childhood development: evidence from rural India. (2023) Batura, Neha; Roy, Reetabrata; Aziz, Sarmad; Sharma, Kamalkant; Kumar, Divya; Verma, Deepali; Correa Ossa, Ana; Spinola, Paula; Soremekun, Seyi; Sikander, Siham; Zafar, Shamsa; Divan, Gauri; Hill, Zelee; Avan, Bilal Iqbal; Rahman, Atif; Kirkwood, Betty; Skordis, Jolene

Development of a 2,4-Diaminothiazole Series for the Treatment of Human African Trypanosomiasis Highlights the Importance of Static-Cidal Screening of Analogues. (2023) Cleghorn, Laura AT; Wall, Richard J; Albrecht, Sébastien; MacGowan, Stuart A; Norval, Suzanne; De Rycker, Manu; Woodland, Andrew; Spinks, Daniel; Thompson, Stephen; Patterson, Stephen; Corpas Lopez, Victoriano; Dey, Gourav; Collie, Iain T; Hallyburton, Irene; Kime, Robert; Simeons, Frederick RC; Stojanovski, Laste; Frearson, Julie A; Wyatt, Paul G; Read, Kevin D; Gilbert, Ian H; Wyllie, Susan

June 2023

Cyanotriazoles are selective topoisomerase II poisons that rapidly cure trypanosome infections. (2023) Rao, Srinivasa PS; Gould, Matthew K; Noeske, Jonas; Saldivia, Manuel; Jumani, Rajiv S; Ng, Pearly S; René, Olivier; Chen, Yen-Liang; Kaiser, Marcel; Ritchie, Ryan; Francisco, Amanda Fortes; Johnson, Nila; Patra, Debjani; Cheung, Harry; Deniston, Colin; Schenk, Andreas D; Cortopassi, Wilian A; Schmidt, Remo S; Wiedemar, Natalie; Thomas, Bryanna; Palkar, Rima; Ghafar, Nahdiyah A; Manoharan, Vanessa; Luu, Catherine; Gable, Jonathan E; Wan, Kah Fei; Myburgh, Elmarie; Mottram, Jeremy C; Barnes, Whitney; Walker, John; Wartchow, Charles; Aziz, Natasha; Osborne, Colin; Wagner, Juergen; Sarko, Christopher; Kelly, John M; Manjunatha, Ujjini H; Mäser, Pascal; Jiricek, Jan; Lakshminarayana, Suresh B; Barrett, Michael P; Diagana, Thierry T

Synthesis and Biological Activity of 2-Benzo[b]thienyl and 2-Bithienyl Amidino-Substituted Benzothiazole and Benzimidazole Derivatives. (2023) Racané, Livio; Zlatić, Katarina; Cindrić, Maja; Mehić, Emina; Karminski-Zamola, Grace; Taylor, Martin C; Kelly, John M; Malić, Silvana Raić; Stojković, Marijana Radić; Kralj, Marijeta; Hranjec, Marijana

Can home visits for early child development be implemented with sufficient coverage and quality at scale? Evidence from the SPRING program in India and Pakistan. (2023) Hill, Zelee; Zafar, Shamsa; Soremekun, Seyi; Sikander, Siham; Avan, Bilal Iqbal; Roy, Reetabrata; Aziz, Sarmad; Kumar, Divya; Parveen, Nazia; Saleem, Shumaila; Verma, Deepali; Sharma, Kamal Kant; Skordis, Jolene; Hafeez, Assad; Rahman, Atif; Kirkwood, Betty; Divan, Gauri

Effect of the SPRING home visits intervention on early child development and growth in rural India and Pakistan: parallel cluster randomised controlled trials. (2023) Kirkwood, Betty R; Sikander, Siham; Roy, Reetabrata; Soremekun, Seyi; Bhopal, Sunil S; Avan, Bilal; Lingam, Raghu; Gram, Lu; Amenga-Etego, Seeba; Khan, Bushra; Aziz, Sarmad; Kumar, Divya; Verma, Deepali; Sharma, Kamal Kant; Panchal, Satya Narayan; Zafar, Shamsa; Skordis, Jolene; Batura, Neha; Hafeez, Assad; Hill, Zelee; Divan, Gauri; Rahman, Atif

Structural basis for DARC binding in reticulocyte invasion by Plasmodium vivax. (2023) Moskovitz, Re'em; Pholcharee, Tossapol; DonVito, Sophia M; Guloglu, Bora; Lowe, Edward; Mohring, Franziska; Moon, Robert W; Higgins, Matthew K

Improving outcomes for children with malaria, diarrhoea and pneumonia in Mozambique: A cluster randomised controlled trial of the inSCALE technology innovation. (2023) Soremekun, Seyi; Källander, Karin; Lingam, Raghu; Branco, Ana-Cristina Castel; Batura, Neha; Strachan, Daniel Ll; Muiambo, Abel; Salomao, Nelson; Condoane, Juliao; Benhane, Fenias; Kasteng, Frida; Vassall, Anna; Hill, Zelee; Ten Asbroek, Guus; Meek, Sylvia; Tibenderana, James; Kirkwood, Betty

Unlocking the Potential of Genomic Data to Inform Typhoid Fever Control Policy: Supportive Resources for Genomic Data Generation, Analysis, and Visualization. (2023) Carey, Megan E; Dyson, Zoe A; Argimón, Silvia; Cerdeira, Louise; Yeats, Corin; Aanensen, David; Mboowa, Gerald; Baker, Stephen; Tessema, Sofonias K; Smith, Anthony M; Okeke, Iruka N; Holt, Kathryn E

Diagnostic yield of urine lipoarabinomannan and sputum tuberculosis tests in people living with HIV: a systematic review and meta-analysis of individual participant data. (2023) Broger, Tobias; Koeppel, Lisa; Huerga, Helena; Miller, Poppy; Gupta-Wright, Ankur; Blanc, François-Xavier; Esmail, Aliasgar; Reeve, Byron WP; Floridia, Marco; Kerkhoff, Andrew D; Ciccacci, Fausto; Kasaro, Margaret P; Thit, Swe Swe; Bastard, Mathieu; Ferlazzo, Gabriella; Yoon, Christina; Van Hoving, Daniël J; Sossen, Bianca; García, Juan Ignacio; Cummings, Matthew J; Wake, Rachel M; Hanson, Josh; Cattamanchi, Adithya; Meintjes, Graeme; Maartens, Gary; Wood, Robin; Theron, Grant; Dheda, Keertan; Olaru, Ioana Diana; Denkinger, Claudia M; TBYield Study Consortium

The brain-kidney-retinal axis in severe falciparum malaria. (2023) Conroy, Andrea L; Datta, Dibyadyuti; Hoffmann, Angelika; Wassmer, Samuel C

Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis. (2023) Záhonová, Kristína; Low, Ross S; Warren, Christopher J; Cantoni, Diego; Herman, Emily K; Yiangou, Lyto; Ribeiro, Cláudia A; Phanprasert, Yasinee; Brown, Ian R; Rueckert, Sonja; Baker, Nicola L; Tachezy, Jan; Betts, Emma L; Gentekaki, Eleni; van der Giezen, Mark; Clark, C Graham; Jackson, Andrew P; Dacks, Joel B; Tsaousis, Anastasios D

Acceptability, Feasibility, Drug Safety, and Effectiveness of a Pilot Mass Drug Administration with a Single Round of Sulfadoxine-Pyrimethamine Plus Primaquine and Indoor Residual Spraying in Communities with Malaria Transmission in Haiti, 2018. (2023) Chang, Michelle A; Impoinvil, Daniel; Hamre, Karen ES; Dalexis, Paul-Emile; Mérilien, Jean-Baptiste; Dismer, Amber M; Fouché, Bernadette; Desir, Luccene; Holmes, Kathleen; Lafortune, Willy; Herman, Camelia; Rogier, Eric; Noland, Gregory S; Young, Alyssa J; Druetz, Thomas; Ashton, Ruth; Eisele, Thomas P; Cohen, Justin; van den Hoogen, Lotus; Stresman, Gillian; Drakeley, Chris; Pothin, Emilie; Cameron, Ewan; Battle, Katherine E; Williamson, John; Telfort, Marc-Aurèle; Lemoine, Jean Frantz

A global genomic analysis of Salmonella Concord reveals lineages with high antimicrobial resistance in Ethiopia. (2023) Cuypers, Wim L; Meysman, Pieter; Weill, François-Xavier; Hendriksen, Rene S; Beyene, Getenet; Wain, John; Nair, Satheesh; Chattaway, Marie A; Perez-Sepulveda, Blanca M; Ceyssens, Pieter-Jan; de Block, Tessa; Lee, Winnie WY; Pardos de la Gandara, Maria; Kornschober, Christian; Moran-Gilad, Jacob; Veldman, Kees T; Cormican, Martin; Torpdahl, Mia; Fields, Patricia I; Černý, Tomáš; Hardy, Liselotte; Tack, Bieke; Mellor, Kate C; Thomson, Nicholas; Dougan, Gordon; Deborggraeve, Stijn; Jacobs, Jan; Laukens, Kris; Van Puyvelde, Sandra

Identification of novel p-cresol inhibitors that reduce Clostridioides difficile's ability to compete with species of the gut microbiome. (2023) Harrison, Mark A; Farthing, Rebecca J; Allen, Nyasha; Ahern, Lucy M; Birchall, Kristian; Bond, Michael; Kaur, Harparkash; Wren, Brendan W; Bergeron, Julien RC; Dawson, Lisa F

Improving community health worker treatment for malaria, diarrhoea, and pneumonia in Uganda through inSCALE community and mHealth innovations: A cluster randomised controlled trial. (2023) Källander, Karin; Soremekun, Seyi; Strachan, Daniel Ll; Hill, Zelee; Kasteng, Frida; Kertho, Edmound; Nanyonjo, Agnes; Ten Asbroek, Guus; Nakirunda, Maureen; Lumumba, Patrick; Ayebale, Godfrey; Bagorogoza, Benson; Vassall, Anna; Meek, Sylvia; Tibenderana, James; Lingam, Raghu; Kirkwood, Betty

An automated microscopy workflow to study Shigella-neutrophil interactions and antibiotic efficacy in vivo. (2023) Lensen, Arthur; Gomes, Margarida C; López-Jiménez, Ana Teresa; Mostowy, Serge

A malaria parasite phospholipase facilitates efficient asexual blood stage egress. (2023) Ramaprasad, Abhinay; Burda, Paul-Christian; Koussis, Konstantinos; Thomas, James A; Pietsch, Emma; Calvani, Enrica; Howell, Steven A; MacRae, James I; Snijders, Ambrosius P; Gilberger, Tim-Wolf; Blackman, Michael J

May 2023

Acquisition of a large virulence plasmid (pINV) promoted temperature-dependent virulence and global dispersal of O96:H19 enteroinvasive Escherichia coli. (2023) Miles, Sydney L; Torraca, Vincenzo; Dyson, Zoe A; López-Jiménez, Ana Teresa; Foster-Nyarko, Ebenezer; Lobato-Márquez, Damián; Jenkins, Claire; Holt, Kathryn E; Mostowy, Serge

Dissecting the interstrand crosslink DNA repair system of Trypanosoma cruzi. (2023) Martinez, Monica Zavala; Olmo, Francisco; Taylor, Martin C; Caudron, Fabrice; Wilkinson, Shane R

Mapping Malaria Vector Habitats in West Africa: Drone Imagery and Deep Learning Analysis for Targeted Vector Surveillance. (2023) Trujillano, Fedra; Garay, Gabriel Jimenez; Alatrista-Salas, Hugo; Byrne, Isabel; Nunez-Del-Prado, Miguel; Chan, Kallista; Manrique, Edgar; Johnson, Emilia; Apollinaire, Nombre; Kouame Kouakou, Pierre; Oumbouke, Welbeck A; Tiono, Alfred B; Guelbeogo, Moussa W; Lines, Jo; Carrasco-Escobar, Gabriel; Fornace, Kimberly

Evaluation of the protective efficacy of Olyset®Plus ceiling net on reducing malaria prevalence in children in Lake Victoria Basin, Kenya: study protocol for a cluster-randomized controlled trial. (2023) Kagaya, Wataru; Chan, Chim W; Kongere, James; Kanoi, Bernard N; Ngara, Mtakai; Omondi, Protus; Osborne, Ashley; Barbieri, Laura; Kc, Achyut; Minakawa, Noboru; Gitaka, Jesse; Kaneko, Akira

Efficacy of oleylphosphocholine in experimental cutaneous leishmaniasis. (2023) Van Bocxlaer, Katrien; Dixon, Jodie; Platteeuw, Johannes J; Van Den Heuvel, Dennie; Mcarthur, Kerri-Nicola; Harris, Andy; Alavijeh, Mo; Croft, Simon L; Yardley, Vanessa

Genomic variation during culture adaptation of genetically complex Plasmodium falciparum clinical isolates. (2023) Claessens, Antoine; Stewart, Lindsay B; Drury, Eleanor; Ahouidi, Ambroise D; Amambua-Ngwa, Alfred; Diakite, Mahamadou; Kwiatkowski, Dominic P; Awandare, Gordon A; Conway, David J

Time Required for Nanopore Whole-Genome Sequencing of Neisseria gonorrhoeae for Identification of Phylogenetic Relationships. (2023) Phillips, Laura T; Witney, Adam A; Furegato, Martina; Laing, Ken G; Zhou, Liqing; Sadiq, S Tariq picture_as_pdf

Within-patient and global evolutionary dynamics of Klebsiella pneumoniae ST17. (2023) Hetland, Marit AK; Hawkey, Jane; Bernhoff, Eva; Bakksjø, Ragna-Johanne; Kaspersen, Håkon; Rettedal, Siren I; Sundsfjord, Arnfinn; Holt, Kathryn E; Löhr, Iren H picture_as_pdf

Interplay between septins and ubiquitin-mediated xenophagy during Shigella entrapment. (2023) Lobato-Márquez, Damián; Conesa, José Javier; López-Jiménez, Ana Teresa; Divine, Michael E; Pruneda, Jonathan N; Mostowy, Serge

Characterising kinetoplastid pantothenate kinase, a multifunctional enzyme of the CoA biosynthesis pathway. (2023) Roscoe, RB

Integrative Genetic Manipulation of Plasmodium cynomolgi Reveals Multidrug Resistance-1 Y976F Associated With Increased In Vitro Susceptibility to Mefloquine. (2023) Ward, Kurt E; Christensen, Peter; Racklyeft, Annie; Dhingra, Satish K; Chua, Adeline CY; Remmert, Caroline; Suwanarusk, Rossarin; Matheson, Jessica; Blackman, Michael J; Kaneko, Osamu; Kyle, Dennis E; Lee, Marcus CS; Moon, Robert W; Snounou, Georges; Rénia, Laurent; Fidock, David A; Russell, Bruce; Bifani, Pablo

Favorable Preclinical Pharmacological Profile of a Novel Antimalarial Pyrrolizidinylmethyl Derivative of 4-amino-7-chloroquinoline with Potent In Vitro and In Vivo Activities. (2023) Basilico, Nicoletta; Parapini, Silvia; D'Alessandro, Sarah; Misiano, Paola; Romeo, Sergio; Dondio, Giulio; Yardley, Vanessa; Vivas, Livia; Nasser, Shereen; Rénia, Laurent; Russell, Bruce M; Suwanarusk, Rossarin; Nosten, François; Sparatore, Anna; Taramelli, Donatella

Sensitive Detection of Asymptomatic and Symptomatic Malaria with Seven Novel Parasite-Specific LAMP Assays and Translation for Use at Point-of-Care. (2023) Malpartida-Cardenas, Kenny; Moser, Nicolas; Ansah, Felix; Pennisi, Ivana; Ahu Prah, Diana; Amoah, Linda Eva; Awandare, Gordon; Hafalla, Julius Clemence R; Cunnington, Aubrey; Baum, Jake; Rodriguez-Manzano, Jesus; Georgiou, Pantelis

Chloroquine resistance evolution in Plasmodium falciparum is mediated by the putative amino acid transporter AAT1. (2023) Amambua-Ngwa, Alfred; Button-Simons, Katrina A; Li, Xue; Kumar, Sudhir; Brenneman, Katelyn Vendrely; Ferrari, Marco; Checkley, Lisa A; Haile, Meseret T; Shoue, Douglas A; McDew-White, Marina; Tindall, Sarah M; Reyes, Ann; Delgado, Elizabeth; Dalhoff, Haley; Larbalestier, James K; Amato, Roberto; Pearson, Richard D; Taylor, Alexander B; Nosten, François H; D'Alessandro, Umberto; Kwiatkowski, Dominic; Cheeseman, Ian H; Kappe, Stefan HI; Avery, Simon V; Conway, David J; Vaughan, Ashley M; Ferdig, Michael T; Anderson, Timothy JC

Analytical approaches for antimalarial antibody responses to confirm historical and recent malaria transmission: an example from the Philippines. (2023) Macalinao, Maria Lourdes M; Fornace, Kimberly M; Reyes, Ralph A; Hall, Tom; Bareng, Alison Paolo N; Adams, John H; Huon, Christèle; Chitnis, Chetan E; Luchavez, Jennifer S; Tetteh, Kevin KA; Yui, Katsuyuki; Hafalla, Julius Clemence R; Espino, Fe Esperanza J; Drakeley, Chris J

Modified Plasmodium falciparum Ring-Stage Survival Assay with ML10 Kinase Inhibitor. (2023) Platon, Lucien; Baker, David A; Ménard, Didier

Bayesian compositional regression with microbiome features via variational inference. (2023) Scott, Darren AV; Benavente, Ernest; Libiseller-Egger, Julian; Fedorov, Dmitry; Phelan, Jody; Ilina, Elena; Tikhonova, Polina; Kudryavstev, Alexander; Galeeva, Julia; Clark, Taane; Lewin, Alex

April 2023

Genetic Diversity and Dispersal of DENGUE Virus among Three Main Island Groups of the Philippines during 2015-2017. (2023) Sy, Ava Kristy; Koo, Carmen; Privaldos, Kristine JR; Quinones, Mary Ann T; Igoy, Mary AU; Villanueva, Sharon YAM; Hibberd, Martin L; Ng, Lee Ching; Hapuarachchi, Hapuarachchige C

A prospective study on linking diarrheagenic E. coli with stunted childhood growth in relation to gut microbiome. (2023) Aziz, Israr; Noreen, Zobia; Ijaz, Umer Zeeshan; Gundogdu, Ozan; Hamid, Muhammad Haroon; Muhammad, Nazir; Khan, Abdullah; Bokhari, Habib

A multidisciplinary approach to the identification of the protein-RNA connectome in double-stranded RNA virus capsids. (2023) Sung, Po-Yu; Zhou, Yiyang; Kao, C Cheng; Aburigh, Ali A; Routh, Andrew; Roy, Polly

Treatment of uncomplicated Plasmodium vivax with chloroquine plus radical cure with primaquine without G6PDd testing is safe in Arba Minch, Ethiopia: assessment of clinical and parasitological response. (2023) Mekonnen, Daniel Abebe; Abadura, Girma Shumie; Behaksra, Sinknesh Wolde; Taffese, Hiwot Solomon; Bayissa, Gudissa Aseffa; Bulto, Mikiyas Gebremichael; Tessema, Tesfaye Sisay; Tadesse, Fitsum G; Gadisa, Endalamaw picture_as_pdf

Septins and K63 ubiquitin chains are present in separate bacterial microdomains during autophagy of entrapped Shigella. (2023) Lobato-Márquez, Damián; Conesa, José Javier; López-Jiménez, Ana Teresa; Divine, Michael E; Pruneda, Jonathan N; Mostowy, Serge

Exploiting Real-Time Genomic Surveillance Data To Assess 4CMenB Meningococcal Vaccine Performance in Scotland, 2015 to 2022. (2023) Rodrigues, CMC; MacDonald, L; Ure, R; Smith, A; Cameron, JC; Maiden, MCJ

Creating and Validating Ligase Primers to Detect Single Nucleotide Polymorphisms Associated with Atovaquone Resistance in Plasmodium falciparum. (2023) Alruwaili, Muharib; Elahi, Rubayet; van Schalkwyk, Donelly; Sutherland, Colin; Shapiro, Theresa; Prigge, Sean; Sullivan, David

A comparative 'omics' approach for prediction of candidate Strongyloides stercoralis diagnostic coproantigens. (2023) Marlais, Tegwen; Bickford-Smith, Jack; Talavera-López, Carlos; Le, Hai; Chowdhury, Fatima; Miles, Michael A

Population dynamics and drug resistance mutations in Plasmodium falciparum on the Bijagós Archipelago, Guinea-Bissau. (2023) Moss, Sophie; Mańko, Emilia; Vasileva, Hristina; Da Silva, Eunice Teixeira; Goncalves, Adriana; Osborne, Ashley; Phelan, Jody; Rodrigues, Amabelia; Djata, Paulo; D'Alessandro, Umberto; Mabey, David; Krishna, Sanjeev; Last, Anna; Clark, Taane G; Campino, Susana

Adenoviral vectored vaccination protects against Crimean-Congo Haemorrhagic Fever disease in a lethal challenge model. (2023) Saunders, Jack E; Gilbride, Ciaran; Dowall, Stuart; Morris, Susan; Ulaszewska, Marta; Spencer, Alexandra J; Rayner, Emma; Graham, Victoria A; Kennedy, Emma; Thomas, Kelly; Hewson, Roger; Gilbert, Sarah C; Belij-Rammerstorfer, Sandra; Lambe, Teresa

A point mutation in recC associated with subclonal replacement of carbapenem-resistant Klebsiella pneumoniae ST11 in China. (2023) Zhou, Kai; Xue, Chun-Xu; Xu, Tingting; Shen, Ping; Wei, Sha; Wyres, Kelly L; Lam, Margaret MC; Liu, Jinquan; Lin, Haoyun; Chen, Yunbo; Holt, Kathryn E; BRICS Working Group; Xiao, Yonghong

March 2023

Classification of Lapses in Smokers Attempting to Stop: A Supervised Machine Learning Approach Using Data From a Popular Smoking Cessation Smartphone App. (2023) Perski, Olga; Li, Kezhi; Pontikos, Nikolas; Simons, David; Goldstein, Stephanie P; Naughton, Felix; Brown, Jamie

TB-ML-a framework for comparing machine learning approaches to predict drug resistance of Mycobacterium tuberculosis. (2023) Libiseller-Egger, Julian; Wang, Linfeng; Deelder, Wouter; Campino, Susana; Clark, Taane G; Phelan, Jody E

Comparative transmission of SARS-CoV-2 Omicron (B.1.1.529) and Delta (B.1.617.2) variants and the impact of vaccination: national cohort study, England. (2023) Allen, Hester; Tessier, Elise; Turner, Charlie; Anderson, Charlotte; Blomquist, Paula; Simons, David; Løchen, Alessandra; Jarvis, Christopher I; Groves, Natalie; Capelastegui, Fernando; Flannagan, Joe; Zaidi, Asad; Chen, Cong; Rawlinson, Christopher; Hughes, Gareth J; Chudasama, Dimple; Nash, Sophie; Thelwall, Simon; Lopez-Bernal, Jamie; Dabrera, Gavin; Charlett, André; Kall, Meaghan; Lamagni, Theresa

Development and validation of serological assays to evaluate malaria transmission. (2023) Oulton, TE

Sero-epidemiology to support decision-making for malaria elimination. (2023) Byrne, Isabel; Dumont, Elin; Nelli, Luca; Stresman, Gillian; Drakeley, Chris

Using Machine Learning to Anticipate Antimicrobial Resistance in Mycobacterium Tuberculosis. (2023) Tunstall, T

Developing an RPA-based Molecular Barcoding Tool for Plasmodium Malaria. (2023) Higgins, MCW

The Evolution and Transmission Dynamics of Multidrug-Resistant Tuberculosis in an Isolated High-Plateau Population of Tibet, China. (2023) Jiang, Qi; Liu, Hai-Can; Liu, Qing-Yun; Phelan, Jody E; Tao, Feng-Xi; Zhao, Xiu-Qin; Wang, Jian; Glynn, Judith R; Takiff, Howard E; Clark, Taane G; Wan, Kang-Lin; Gao, Qian

Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing. (2023) Wick, Ryan R; Judd, Louise M; Holt, Kathryn E

A snapshot of the prevalence of dihydropteroate synthase-431V mutation and other sulfadoxine-pyrimethamine resistance markers in Plasmodium falciparum isolates in Nigeria. (2023) Adegbola, Adebanjo J; Ijarotimi, Omotade A; Ubom, Akaninyene E; Adesoji, Bukola A; Babalola, Olajide E; Hocke, Emma F; Hansson, Helle; Mousa, Andria; Bolaji, Oluseye O; Alifrangis, Michael; Roper, Cally

Prevalence of Plasmodium falciparum haplotypes associated with resistance to sulfadoxine-pyrimethamine and amodiaquine before and after upscaling of seasonal malaria chemoprevention in seven African countries: a genomic surveillance study. (2023) Beshir, Khalid B; Muwanguzi, Julian; Nader, Johanna; Mansukhani, Raoul; Traore, Aliou; Gamougam, Kadidja; Ceesay, Sainey; Bazie, Thomas; Kolie, Fassou; Lamine, Mahaman M; Cairns, Matt; Snell, Paul; Scott, Susana; Diallo, Abdoulaye; Merle, Corinne S; NDiaye, Jean Louis; Razafindralambo, Lanto; Moroso, Diego; Ouedraogo, Jean-Bosco; Zongo, Issaka; Kessely, Hamit; Doumagoum, Daugla; Bojang, Kalifa; Ceesay, Serign; Loua, Kovana; Maiga, Hamma; Dicko, Alassane; Sagara, Issaka; Laminou, Ibrahim M; Ogboi, Sonny Johnbull; Eloike, Tony; Milligan, Paul; Sutherland, Colin J

Long-term oral antibiotic use in people with acne vulgaris in UK primary care: a drug utilization study. (2023) Bhate, Ketaki; Mansfield, Kathryn E; Sinnott, Sarah-Jo; Margolis, David J; Adesanya, Elizabeth; Francis, Nick; Leyrat, Clemence; Hopkins, Susan; Stabler, Richard; Shallcross, Laura; Langan, Sinéad M; Mathur, Rohini

Durability of ChAdOx1 nCoV-19 (AZD1222) vaccine and hybrid humoral immunity against variants including omicron BA.1 and BA.4 6 months after vaccination (COV005): a post-hoc analysis of a randomised, phase 1b-2a trial. (2023) Madhi, Shabir A; Kwatra, Gaurav; Richardson, Simone I; Koen, Anthonet L; Baillie, Vicky; Cutland, Clare L; Fairlie, Lee; Padayachee, Sherman D; Dheda, Keertan; Barnabas, Shaun L; Bhorat, Qasim Ebrahim; Briner, Carmen; Ahmed, Khatija; Aley, Parvinder K; Bhikha, Sutika; Bhorat, AE; Esmail, Aliasgar; Horne, Elizea; Kaldine, Haajira; Mukendi, Christian K; Madzorera, Vimbai Sharon; Manamela, Nelia P; Masilela, Mduduzi; Hermanus, S Tandile; Motlou, Thopisang; Mzindle, Nonkululeko; Oelofse, Suzette; Patel, Faeezah; Rhead, Sarah; Rossouw, Lindie; Taoushanis, Carol; van Eck, Samuel; Lambe, Teresa; Gilbert, Sarah C; Pollard, Andrew J; Moore, Penny L; Izu, Alane

A high-resolution melt curve toolkit to identify lineage-defining SARS-CoV-2 mutations. (2023) Fraser, Alice J; Greenland-Bews, Caitlin; Kelly, Daniel; Williams, Christopher T; LSTM Diagnostics Group; CONDOR Steering Group; Body, Richard; Adams, Emily R; Atienzar, Ana Cubas; Edwards, Thomas; Allen, David J

Genomic attributes of Vibrio cholerae O1 responsible for 2022 massive cholera outbreak in Bangladesh. (2023) Monir, Md Mamun; Islam, Mohammad Tarequl; Mazumder, Razib; Mondal, Dinesh; Nahar, Kazi Sumaita; Sultana, Marzia; Morita, Masatomo; Ohnishi, Makoto; Huq, Anwar; Watanabe, Haruo; Qadri, Firdausi; Rahman, Mustafizur; Thomson, Nicholas; Seed, Kimberley; Colwell, Rita R; Ahmed, Tahmeed; Alam, Munirul

Baseline prevalence of molecular marker of sulfadoxine/pyrimethamine resistance in Ebonyi and Osun states, Nigeria: amplicon deep sequencing of dhps-540. (2023) Olukosi, Adeola Y; Ajibaye, Olusola; Omoniwa, Omowunmi; Oresanya, Olusola; Oluwagbemiga, Aina O; Ujuju, Chinazo; Ekholuenetale, Michael; Maxwell, Kolawole; Sutherland, Colin J; Tibenderana, James K; Beshir, Khalid B

February 2023

Zebrafish null mutants of Sept6 and Sept15 are viable but more susceptible to Shigella infection. (2023) Torraca, Vincenzo; Bielecka, Magdalena K; Gomes, Margarida C; Brokatzky, Dominik; Busch-Nentwich, Elisabeth M; Mostowy, Serge

Proximity proteomics identifies septins and PAK2 as decisive regulators of actomyosin-mediated expulsion of von Willebrand factor. (2023) El-Mansi, Sammy; Robinson, Christopher L; Kostelnik, Katja B; McCormack, Jessica J; Mitchell, Tom P; Lobato-Márquez, Damián; Rajeeve, Vinothini; Cutillas, Pedro; Cutler, Daniel F; Mostowy, Serge; Nightingale, Thomas D

The septin cytoskeleton: Heteromer composition defines filament function. (2023) Güler, Gizem Özbaykal; Mostowy, Serge

Emergent variant modeling of the serological repertoire to norovirus in young children. (2023) Lindesmith, Lisa C; Brewer-Jensen, Paul D; Conrad, Helen; O'Reilly, Kathleen M; Mallory, Michael L; Kelly, Daniel; Williams, Rachel; Edmunds, W John; Allen, David J; Breuer, Judith; Baric, Ralph S

P1 Bacteriophage-Enabled Delivery of CRISPR-Cas9 Antimicrobial Activity Against Shigella flexneri. (2023) Huan, Yang W; Torraca, Vincenzo; Brown, Russell; Fa-Arun, Jidapha; Miles, Sydney L; Oyarzún, Diego A; Mostowy, Serge; Wang, Baojun

A phylogenetic study of dengue virus in urban Vietnam shows long-term persistence of endemic strains. (2023) Ashall, James; Shah, Sonal; Biggs, Joseph R; Chang, Jui-Ning R; Jafari, Yalda; Brady, Oliver J; Mai, Huynh Kim; Lien, Le Thuy; Do Thai, Hung; Nguyen, Hien Anh Thi; Anh, Dang Duc; Iwasaki, Chihiro; Kitamura, Noriko; Van Loock, Marnix; Herrera-Taracena, Guillermo; Rasschaert, Freya; Van Wesenbeeck, Liesbeth; Yoshida, Lay-Myint; Hafalla, Julius Clemence R; Hue, Stephane; Hibberd, Martin L

Population cause of death estimation using verbal autopsy methods in large-scale field trials of maternal and child health: lessons learned from a 20-year research collaboration in Central Ghana. (2023) Danso, Samuel O; Manu, Alexander; Fenty, Justin; Amanga-Etego, Seeba; Avan, Bilal Iqbal; Newton, Sam; Soremekun, Seyi; Kirkwood, Betty

Towards environmental detection, quantification, and molecular characterization of Anopheles stephensi and Aedes aegypti from experimental larval breeding sites. (2023) Kristan, Mojca; Acford-Palmer, Holly; Campos, Monica Oliveira; Collins, Emma L; Phelan, Jody; Portwood, Natalie M; Pelloquin, Bethanie; Clarke, Sian; Lines, Jo; Clark, Taane G; Walker, Thomas; Campino, Susana; Messenger, Louisa A

Studies on innate immune responses to Mycobacterium bovis BCG. (2023) Butkeviciute, E

Variation in missed doses and reasons for discontinuation of anti-tuberculosis drugs during hospital treatment for drug-resistant tuberculosis in South Africa. (2023) Pietersen, Elize; Anderson, Kim; Cox, Helen; Dheda, Keertan; Bian, Aihua; Shepherd, Bryan E; Sterling, Timothy R; Warren, Robin M; van der Heijden, Yuri F

Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae. (2023) Foster-Nyarko, Ebenezer; Cottingham, Hugh; Wick, Ryan R; Judd, Louise M; Lam, Margaret MC; Wyres, Kelly L; Stanton, Thomas D; Tsang, Kara K; David, Sophia; Aanensen, David M; Brisse, Sylvain; Holt, Kathryn E

Population genetic analysis of Plasmodium knowlesi reveals differential selection and exchange events between Borneo and Peninsular sub-populations. (2023) Turkiewicz, Anna; Manko, Emilia; Oresegun, Damiola R; Nolder, Debbie; Spadar, Anton; Sutherland, Colin J; Cox-Singh, Janet; Moon, Robert W; Lau, Yee-Ling; Campino, Susana; Clark, Taane G

The use of representative community samples to assess SARS-CoV-2 lineage competition: Alpha outcompetes Beta and wild-type in England from January to March 2021. (2023) Eales, Oliver; Page, Andrew J; Tang, Sonja N; Walters, Caroline E; Wang, Haowei; Haw, David; Trotter, Alexander J; Le Viet, Thanh; Foster-Nyarko, Ebenezer; Prosolek, Sophie; Atchison, Christina; Ashby, Deborah; Cooke, Graham; Barclay, Wendy; Donnelly, Christl A; O'Grady, Justin; Volz, Erik; The Covid-Genomics Uk Cog-Uk Consortium; Darzi, Ara; Ward, Helen; Elliott, Paul; Riley, Steven

Longitudinal IgA and IgG Response, and ACE2 Binding Blockade, to Full-Length SARS-CoV-2 Spike Protein Variants in a Population of Black PLWH Vaccinated with ChAdOx1 nCoV-19. (2023) Smith, Muneerah; Kwatra, Gaurav; Izu, Alane; Nel, Andrew; Cutland, Clare; Ahmed, Khatja; Baillie, Vicky; Barnabas, Shaun; Bhorat, Qasim; Briner, Carmen; Lazarus, Erica; Dheda, Keertan; Fairlie, Lee; Koen, Anthonet; Madhi, Shabir; Blackburn, Jonathan M

Investigating the effect of ribavirin treatment on genetic mutations in Crimean-Congo haemorrhagic fever virus (CCHFV) through next-generation sequencing. (2023) D'Addiego, Jake; Elaldi, Nazif; Wand, Nadina; Osman, Karen; Bagci, Binnur Koksal; Kennedy, Emma; Pektas, Ayse Nur; Hart, Eilish; Slack, Gillian; Hewson, Roger

Evaluation of ROTARIX® Booster Dose Vaccination at 9 Months for Safety and Enhanced Anti-Rotavirus Immunity in Zambian Children: A Randomised Controlled Trial. (2023) Laban, Natasha Makabilo; Bosomprah, Samuel; Simuyandi, Michelo; Chibuye, Mwelwa; Chauwa, Adriace; Chirwa-Chobe, Masuzyo; Sukwa, Nsofwa; Chipeta, Chikumbutso; Velu, Rachel; Njekwa, Katanekwa; Mubanga, Cynthia; Mwape, Innocent; Goodier, Martin Rhys; Chilengi, Roma

Genetic diversity of Plasmodium vivax isolates from pregnant women in the Western Brazilian Amazon: a prospective cohort study. (2023) Dombrowski, Jamille Gregório; Acford-Palmer, Holly; Campos, Monica; Separovic, Erika Paula Machado; Epiphanio, Sabrina; Clark, Taane Gregory; Campino, Susana; Marinho, Claudio Romero Farias

Population-based genomic study of Plasmodium vivax malaria in seven Brazilian states and across South America. (2023) Ibrahim, Amy; Manko, Emilia; Dombrowski, Jamille G; Campos, Mónica; Benavente, Ernest Diez; Nolder, Debbie; Sutherland, Colin J; Nosten, Francois; Fernandez, Diana; Vélez-Tobón, Gabriel; Castaño, Alberto Tobón; Aguiar, Anna Caroline C; Pereira, Dhelio Batista; da Silva Santos, Simone; Suarez-Mutis, Martha; Di Santi, Silvia Maria; Regina de Souza Baptista, Andrea; Dantas Machado, Ricardo Luiz; Marinho, Claudio RF; Clark, Taane G; Campino, Susana

Genome-wide host-pathogen analyses reveal genetic interaction points in tuberculosis disease. (2023) Phelan, Jody; Gomez-Gonzalez, Paula Josefina; Andreu, Nuria; Omae, Yosuke; Toyo-Oka, Licht; Yanai, Hideki; Miyahara, Reiko; Nedsuwan, Supalert; de Sessions, Paola Florez; Campino, Susana; Sallah, Neneh; Parkhill, Julian; Smittipat, Nat; Palittapongarnpim, Prasit; Mushiroda, Taisei; Kubo, Michiaki; Tokunaga, Katsushi; Mahasirimongkol, Surakameth; Hibberd, Martin L; Clark, Taane G

Altered Faecal Microbiota Composition and Structure of Ghanaian Children with Acute Gastroenteritis. (2023) Quaye, Emmanuel Kofi; Adjei, Raymond Lovelace; Isawumi, Abiola; Allen, David J; Caporaso, J Gregory; Quaye, Osbourne

Antibodies to repeat-containing antigens in Plasmodium falciparum are exposure-dependent and short-lived in children in natural malaria infections. (2023) Raghavan, Madhura; Kalantar, Katrina L; Duarte, Elias; Teyssier, Noam; Takahashi, Saki; Kung, Andrew F; Rajan, Jayant V; Rek, John; Tetteh, Kevin KA; Drakeley, Chris; Ssewanyana, Isaac; Rodriguez-Barraquer, Isabel; Greenhouse, Bryan; DeRisi, Joseph L

A novel class of sulphonamides potently block malaria transmission by targeting a Plasmodium vacuole membrane protein. (2023) Yahiya, Sabrina; Saunders, Charlie N; Hassan, Sarah; Straschil, Ursula; Fischer, Oliver J; Rueda-Zubiaurre, Ainoa; Haase, Silvia; Vizcay-Barrena, Gema; Famodimu, Mufuliat Toyin; Jordan, Sarah; Delves, Michael J; Tate, Edward W; Barnard, Anna; Fuchter, Matthew J; Baum, Jake

The kidney-brain pathogenic axis in severe falciparum malaria. (2023) Conroy, Andrea L; Datta, Dibyadyuti; Hoffmann, Angelika; Wassmer, Samuel C

January 2023

Campylobacter jejuni Modulates Reactive Oxygen Species Production and NADPH Oxidase 1 Expression in Human Intestinal Epithelial Cells. (2023) Hong, Geunhye; Davies, Cadi; Omole, Zahra; Liaw, Janie; Grabowska, Anna D; Canonico, Barbara; Corcionivoschi, Nicolae; Wren, Brendan W; Dorrell, Nick; Elmi, Abdi; Gundogdu, Ozan

Zika virus surveillance in human and mosquito populations in Cabo Verde – exploring molecular and serological tools for the surveillance of emerging infectious diseases. (2023) Ward, D

Malaria parasite density and detailed qualitative microscopy enhances large-scale profiling of infection endemicity in Nigeria. (2023) Oyibo, Wellington; Latham, Victoria; Oladipo, Oladosu; Ntadom, Godwin; Uhomoibhi, Perpetua; Ogbulafor, Nnenna; Okoronkwo, Chukwu; Okoh, Festus; Mahmoud, Aminu; Shekarau, Emmanuel; Oresanya, Olusola; Cherima, Yakubu Joel; Jalingo, Innua; Abba, Bintu; Audu, Mohammed; Conway, David J

Letter to the editor: Importance of considering high-risk behaviours in COVID-19 vaccine effectiveness estimates with observational studies. (2023) Arashiro, Takeshi; Arima, Yuzo; Kuramochi, Jin; Muraoka, Hirokazu; Sato, Akihiro; Chubachi, Kumi; Oba, Kunihiro; Yanai, Atsushi; Arioka, Hiroko; Uehara, Yuki; Ihara, Genei; Kato, Yasuyuki; Yanagisawa, Naoki; Nagura, Yoshito; Yanai, Hideki; Ueda, Akihiro; Numata, Akira; Kato, Hideaki; Oka, Hideaki; Nishida, Yusuke; Ooki, Takao; Nidaira, Yuki; Stucky, Ashley; Suzuki, Tadaki; Smith, Chris; Hibberd, Martin; Ariyoshi, Koya; Suzuki, Motoi

Development of a Glycoconjugate Vaccine Against Group A Streptococcus (GAS). (2023) Burns, K

Biochemical characterization and identification of ferulenol and embelin as potent inhibitors of malate:quinone oxidoreductase from Campylobacter jejuni. (2023) Kabongo, Augustin Tshibaka; Acharjee, Rajib; Sakura, Takaya; Bundutidi, Gloria Mavinga; Hartuti, Endah Dwi; Davies, Cadi; Gundogdu, Ozan; Kita, Kiyoshi; Shiba, Tomoo; Inaoka, Daniel Ken

Rodent trapping studies as an overlooked information source for understanding endemic and novel zoonotic spillover. (2023) Simons, David; Attfield, Lauren A; Jones, Kate E; Watson-Jones, Deborah; Kock, Richard

Understanding the genetic diversity, antimicrobial resistance, and virulence of Klebsiella pneumoniae bacteria. (2023) Spadar, A

Analysis of Mycobacterium tuberculosis ‘omics data to inform on loci linked to drug resistance, pathogenicity and virulence. (2023) Gómez González, PJ

Using whole genome sequencing data to identify strain-types, transmission enhancers and novel drug resistance mutations of Mycobacterium tuberculosis. (2023) Napier, G

Large-scale genomic analysis of global Klebsiella pneumoniae plasmids reveals multiple simultaneous clusters of carbapenem-resistant hypervirulent strains. (2023) Spadar, Anton; Perdigão, João; Campino, Susana; Clark, Taane G

Pf7: an open dataset of Plasmodium falciparum genome variation in 20,000 worldwide samples. (2023) MalariaGEN; Abdel Hamid, Muzamil Mahdi; Abdelraheem, Mohamed Hassan; Acheampong, Desmond Omane; Ahouidi, Ambroise; Ali, Mozam; Almagro-Garcia, Jacob; Amambua-Ngwa, Alfred; Amaratunga, Chanaki; Amenga-Etego, Lucas; Andagalu, Ben; Anderson, Tim; Andrianaranjaka, Voahangy; Aniebo, Ifeyinwa; Aninagyei, Enoch; Ansah, Felix; Ansah, Patrick O; Apinjoh, Tobias; Arnaldo, Paulo; Ashley, Elizabeth; Auburn, Sarah; Awandare, Gordon A; Ba, Hampate; Baraka, Vito; Barry, Alyssa; Bejon, Philip; Bertin, Gwladys I; Boni, Maciej F; Borrmann, Steffen; Bousema, Teun; Bouyou-Akotet, Marielle; Branch, Oralee; Bull, Peter C; Cheah, Huch; Chindavongsa, Keobouphaphone; Chookajorn, Thanat; Chotivanich, Kesinee; Claessens, Antoine; Conway, David J; Corredor, Vladimir; Courtier, Erin; Craig, Alister; D'Alessandro, Umberto; Dama, Souleymane; Day, Nicholas; Denis, Brigitte; Dhorda, Mehul; Diakite, Mahamadou; Djimde, Abdoulaye; Dolecek, Christiane; Dondorp, Arjen; Doumbia, Seydou; Drakeley, Chris; Drury, Eleanor; Duffy, Patrick; Echeverry, Diego F; Egwang, Thomas G; Enosse, Sonia Maria Mauricio; Erko, Berhanu; Fairhurst, Rick M; Faiz, Abdul; Fanello, Caterina A; Fleharty, Mark; Forbes, Matthew; Fukuda, Mark; Gamboa, Dionicia; Ghansah, Anita; Golassa, Lemu; Goncalves, Sonia; Harrison, GL Abby; Healy, Sara Anne; Hendry, Jason A; Hernandez-Koutoucheva, Anastasia; Hien, Tran Tinh; Hill, Catherine A; Hombhanje, Francis; Hott, Amanda; Htut, Ye; Hussein, Mazza; Imwong, Mallika; Ishengoma, Deus; Jackson, Scott A; Jacob, Chris G; Jeans, Julia; Johnson, Kimberly J; Kamaliddin, Claire; Kamau, Edwin; Keatley, Jon; Kochakarn, Theerarat; Konate, Drissa S; Konaté, Abibatou; Kone, Aminatou; Kwiatkowski, Dominic P; Kyaw, Myat P; Kyle, Dennis; Lawniczak, Mara; Lee, Samuel K; Lemnge, Martha; Lim, Pharath; Lon, Chanthap; Loua, Kovana M; Mandara, Celine I; Marfurt, Jutta; Marsh, Kevin; Maude, Richard James; Mayxay, Mayfong; Maïga-Ascofaré, Oumou; Miotto, Olivo; Mita, Toshihiro; Mobegi, Victor; Mohamed, Abdelrahim Osman; Mokuolu, Olugbenga A; Montgomery, Jaqui; Morang'a, Collins Misita; Mueller, Ivo; Murie, Kathryn; Newton, Paul N; Ngo Duc, Thang; Nguyen, Thuy; Nguyen, Thuy-Nhien; Nguyen Thi Kim, Tuyen; Nguyen Van, Hong; Noedl, Harald; Nosten, Francois; Noviyanti, Rintis; Ntui, Vincent Ntui-Njock; Nzila, Alexis; Ochola-Oyier, Lynette Isabella; Ocholla, Harold; Oduro, Abraham; Omedo, Irene; Onyamboko, Marie A; Ouedraogo, Jean-Bosco; Oyebola, Kolapo; Oyibo, Wellington Aghoghovwia; Pearson, Richard; Peshu, Norbert; Phyo, Aung P; Plowe, Christopher V; Price, Ric N; Pukrittayakamee, Sasithon; Quang, Huynh Hong; Randrianarivelojosia, Milijaona; Rayner, Julian C; Ringwald, Pascal; Rosanas-Urgell, Anna; Rovira-Vallbona, Eduard; Ruano-Rubio, Valentin; Ruiz, Lastenia; Saunders, David; Shayo, Alex; Siba, Peter; Simpson, Victoria J; Sissoko, Mahamadou S; Smith, Christen; Su, Xin-Zhuan; Sutherland, Colin; Takala-Harrison, Shannon; Talman, Arthur; Tavul, Livingstone; Thanh, Ngo Viet; Thathy, Vandana; Thu, Aung Myint; Toure, Mahamoudou; Tshefu, Antoinette; Verra, Federica; Vinetz, Joseph; Wellems, Thomas E; Wendler, Jason; White, Nicholas J; Whitton, Georgia; Yavo, William; van der Pluijm, Rob W

From genome to function: A genomic investigation into understudied populations of the malaria parasites Plasmodium malariae and P.vivax. (2023) Ibrahim, A

Risk factors for SARS-CoV-2 infection in primary and secondary school students and staff in England in the 2020/2021 school year: a longitudinal study. (2023) Nguipdop-Djomo, Patrick; Oswald, William E; Halliday, Katherine E; Cook, Sarah; Sturgess, Joanna; Sundaram, Neisha; Warren-Gash, Charlotte; Fine, Paul Em; Glynn, Judith; Allen, Elizabeth; Clark, Taane G; Ford, Benjamin; Judd, Alison; Ireland, Georgina; Poh, John; Bonell, Chris; Dawe, Fiona; Rourke, Emma; Diamond, Ian; Ladhani, Shamez N; Langan, Sinéad M; Hargreaves, James; Mangtani, Punam; COVID-19 Schools Infection Survey Study Group

The genomic characterization of Salmonella Paratyphi A from an outbreak of enteric fever in Vadodara, India. (2023) Pereira-Dias, Joana; Taneja, Neelam; Mahindroo, Jaspreet; Maheshwari, Geeti; Patel, Padma J; Thu, Trang Nguyen Hoang; Keane, Jacqui; Dyson, Zoe A; Baker, Stephen; Mylona, Elli

Collaborative Virtual Screening Identifies a 2-Aryl-4-aminoquinazoline Series with Efficacy in an In Vivo Model of Trypanosoma cruzi Infection. (2023) Tawaraishi, Taisuke; Ochida, Atsuko; Akao, Yuichiro; Itono, Sachiko; Kamaura, Masahiro; Akther, Thamina; Shimada, Mitsuyuki; Canan, Stacie; Chowdhury, Sanjoy; Cao, Yafeng; Condroski, Kevin; Engkvist, Ola; Francisco, Amanda; Ghosh, Sunil; Kaki, Rina; Kelly, John M; Kimura, Chiaki; Kogej, Thierry; Nagaoka, Kazuya; Naito, Akira; Pairaudeau, Garry; Radu, Constantin; Roberts, Ieuan; Shum, David; Watanabe, Nao-Aki; Xie, Huanxu; Yonezawa, Shuji; Yoshida, Osamu; Yoshida, Ryu; Mowbray, Charles; Perry, Benjamin

Point-of-care prognostication in moderate Covid-19: Analytical validation and prognostic accuracy of a soluble urokinase plasminogen activator receptor (suPAR) rapid test. (2023) Chandna, Arjun; Mahajan, Raman; Gautam, Priyanka; Mwandigha, Lazaro; Dittrich, Sabine; Kumar, Vikash; Osborn, Jennifer; Kumar, Pragya; Koshiaris, Constantinos; Varghese, George M; Lubell, Yoel; Burza, Sakib

Functional genetic variation in pe/ppe genes contributes to diversity in Mycobacterium tuberculosis lineages and potential interactions with the human host. (2023) Gómez-González, Paula Josefina; Grabowska, Anna D; Tientcheu, Leopold D; Tsolaki, Anthony G; Hibberd, Martin L; Campino, Susana; Phelan, Jody E; Clark, Taane G

Phylogenetic inference of pneumococcal transmission from cross-sectional data, a pilot study. (2023) Hackman, Jada; Sheppard, Carmen; Phelan, Jody; Jones-Warner, William; Sobkowiak, Ben; Shah, Sonal; Litt, David; Fry, Norman K; Toizumi, Michiko; Yoshida, Lay-Myint; Hibberd, Martin; Miller, Elizabeth; Flasche, Stefan; Hué, Stéphane

Diagnosis of cerebral malaria: Tools to reduce Plasmodium falciparum associated mortality. (2023) Muppidi, Pranavi; Wright, Emily; Wassmer, Samuel C; Gupta, Himanshu

Projected health impact of post-discharge malaria chemoprevention among children with severe malarial anaemia in Africa. (2023) Okell, Lucy C; Kwambai, Titus K; Dhabangi, Aggrey; Khairallah, Carole; Nkosi-Gondwe, Thandile; Winskill, Peter; Opoka, Robert; Mousa, Andria; Kühl, Melf-Jakob; Lucas, Tim CD; Challenger, Joseph D; Idro, Richard; Weiss, Daniel J; Cairns, Matthew; Ter Kuile, Feiko O; Phiri, Kamija; Robberstad, Bjarne; Mori, Amani Thomas

Optimizing the role of 'lead mothers' in seasonal malaria chemoprevention (SMC) campaigns: formative research in Kano State, northern Nigeria. (2023) Okereke, Ekechi; Smith, Helen; Oguoma, Chibuzo; Oresanya, Olusola; Maxwell, Kolawole; Anikwe, Chinedu; Osuji, Lawrence Chijioke; Ogazi, Obianuju; Musa, Jamila; Rajab, Ashiru; Shekarau, Emmanuel; Okoh, Festus; Viganò, Erica; Donovan, Laura; Ward, Charlotte; Baker, Kevin

A combinatorial DNA assembly approach to biosynthesis of N-linked glycans in E. coli. (2023) Passmore, Ian J; Faulds-Pain, Alexandra; Abouelhadid, Sherif; Harrison, Mark A; Hall, Catherine L; Hitchen, Paul; Dell, Anne; Heap, John T; Wren, Brendan W

C-reactive protein binds to short phosphoglycan repeats of Leishmania secreted proteophosphoglycans and activates complement. (2023) Seow, Eu Shen; Doran, Eve C; Schroeder, Jan-Hendrik; Rogers, Matthew E; Raynes, John G