LSHTM Organisational Structure (62309)

Faculty of Infectious and Tropical Diseases (19963)

Department of Infection Biology (5999)

Dept of Immunology and Infection (-2019) (955)

Dept of Pathogen Molecular Biology (-2019) (1083) Month Authors/Creators Item Type Full Text

A

Tissue and host species-specific transcriptional changes in models of experimental visceral leishmaniasis. (2018) Ashwin, Helen; Seifert, Karin; Forrester, Sarah; Brown, Najmeeyah; MacDonald, Sandy; James, Sally; Lagos, Dimitris; Timmis, Jon; Mottram, Jeremy C; Croft, Simon L; Kaye, Paul M

Autophagy-Virus Interplay: From Cell Biology to Human Disease. (2018) Ahmad, Liyana; Mostowy, Serge; Sancho-Shimizu, Vanessa

Dynamic network approach for the modelling of genomic sub-complexes in multi-segmented viruses. (2018) AlShaikhahmed, Kinda; Leonov, German; Sung, Po-Yu; Bingham, Richard J; Twarock, Reidun; Roy, Polly

C-Tb skin test to diagnose Mycobacterium tuberculosis infection in children and HIV-infected adults: A phase 3 trial. (2018) Aggerbeck, Henrik; Ruhwald, Morten; Hoff, Søren T; Borregaard, Bettine; Hellstrom, Elizabeth; Malahleha, Mookho; Siebert, Mirna; Gani, Mashra; Seopela, Vincent; Diacon, Andreas; Lourens, Madeleine; Andersen, Peter; Dheda, Keertan

S-acylation regulates the trafficking and stability of the unconventional Q-SNARE STX19. (2018) Ampah, Khamal K; Greaves, Jennifer; Shun-Shion, Amber S; Asnawi, Asral W; Lidster, Jessica A; Chamberlain, Luke H; Collins, Mark O; Peden, Andrew A

Human TANK-binding kinase 1 is required for early autophagy induction upon herpes simplex virus 1 infection. (2018) Ahmad, Liyana; Mashbat, Bayarchimeg; Leung, Corwin; Brookes, Charlotte; Hamad, Samar; Krokowski, Sina; Shenoy, Avinash R; Lorenzo, Lazaro; Levin, Michael; O'Hare, Peter; Zhang, Shen-Ying; Casanova, Jean-Laurent; Mostowy, Serge; Sancho-Shimizu, Vanessa

An expanded global inventory of allelic variation in the most extremely polymorphic region of Plasmodium falciparum merozoite surface protein 1 provided by short read sequence data. (2018) Aspeling-Jones, Harvey; Conway, David J

Tailoring a Plasmodium vivax Vaccine To Enhance Efficacy through a Combination of a CSP Virus-Like Particle and TRAP Viral Vectors. (2018) Atcheson, Erwan; Bauza, Karolis; Salman, Ahmed M; Alves, Eduardo; Blight, Joshua; Viveros-Sandoval, Martha Eva; Janse, Chris J; Khan, Shahid M; Hill, Adrian VS; Reyes-Sandoval, Arturo

Taxonomy of the order Mononegavirales: update 2018. (2018) Amarasinghe, Gaya K; Aréchiga Ceballos, Nidia G; Banyard, Ashley C; Basler, Christopher F; Bavari, Sina; Bennett, Andrew J; Blasdell, Kim R; Briese, Thomas; Bukreyev, Alexander; Caì, Yíngyún; Calisher, Charles H; Campos Lawson, Cristine; Chandran, Kartik; Chapman, Colin A; Chiu, Charles Y; Choi, Kang-Seuk; Collins, Peter L; Dietzgen, Ralf G; Dolja, Valerian V; Dolnik, Olga; Domier, Leslie L; Dürrwald, Ralf; Dye, John M; Easton, Andrew J; Ebihara, Hideki; Echevarría, Juan E; Fooks, Anthony R; Formenty, Pierre BH; Fouchier, Ron AM; Freuling, Conrad M; Ghedin, Elodie; Goldberg, Tony L; Hewson, Roger; Horie, Masayuki; Hyndman, Timothy H; Jiāng, Dàohóng; Kityo, Robert; Kobinger, Gary P; Kondō, Hideki; Koonin, Eugene V; Krupovic, Mart; Kurath, Gael; Lamb, Robert A; Lee, Benhur; Leroy, Eric M; Maes, Piet; Maisner, Andrea; Marston, Denise A; Mor, Sunil Kumar; Müller, Thomas; Mühlberger, Elke; Ramírez, Víctor Manuel Neira; Netesov, Sergey V; Ng, Terry Fei Fan; Nowotny, Norbert; Palacios, Gustavo; Patterson, Jean L; Pawęska, Janusz T; Payne, Susan L; Prieto, Karla; Rima, Bertus K; Rota, Paul; Rubbenstroth, Dennis; Schwemmle, Martin; Siddell, Stuart; Smither, Sophie J; Song, Qisheng; Song, Timothy; Stenglein, Mark D; Stone, David M; Takada, Ayato; Tesh, Robert B; Thomazelli, Luciano Matsumiya; Tomonaga, Keizō; Tordo, Noël; Towner, Jonathan S; Vasilakis, Nikos; Vázquez-Morón, Sonia; Verdugo, Claudio; Volchkov, Viktor E; Wahl, Victoria; Walker, Peter J; Wang, David; Wang, Lin-Fa; Wellehan, James FX; Wiley, Michael R; Whitfield, Anna E; Wolf, Yuri I; Yè, Gōngyín; Zhāng, Yǒng-Zhèn; Kuhn, Jens H

Methods for ascertaining norovirus disease burdens. (2018) Allen, David J; Harris, John P

Effect of high-intensity versus low-intensity praziquantel treatment on HIV disease progression in HIV and Schistosoma mansoni co-infected patients: a randomised controlled trial. (2018) Abaasa, Andrew; Asiki, Gershim; Obuku Ekii, Andrew; Wanyenze, Josephine; Pala, Pietro; J van Dam, Govert; Corstjens, Paul LAM; Hughes, Peter; Ding, Song; Pantaleo, Giuseppe; Kaleebu, Pontiano; Elliott, Alison M; Kamali, Anatoli

Structure and function of L-threonine-3-dehydrogenase from the parasitic protozoan Trypanosoma brucei revealed by X-ray crystallography and geometric simulations. (2018) Adjogatse, Eyram; Erskine, Peter; Wells, Stephen A; Kelly, John M; Wilden, Jonathan D; Chan, AW Edith; Selwood, David; Coker, Alun; Wood, Steve; Cooper, Jonathan B

Consistent signatures of selection from genomic analysis of pairs of temporal and spatial Plasmodium falciparum populations from The Gambia. (2018) Amambua-Ngwa, Alfred; Jeffries, David; Amato, Roberto; Worwui, Archibald; Karim, Mane; Ceesay, Sukai; Nyang, Haddy; Nwakanma, Davis; Okebe, Joseph; Kwiatkowski, Dominic; Conway, David J; D'Alessandro, Umberto

Association Between Recent Overnight Travel and Risk of Malaria: A Prospective Cohort Study at 3 Sites in Uganda. (2018) Arinaitwe, Emmanuel; Dorsey, Grant; Nankabirwa, Joaniter I; Kigozi, Simon P; Katureebe, Agaba; Kakande, Elijah; Rek, John; Rosenthal, Philip J; Drakeley, Chris; Kamya, Moses R; Staedke, Sarah G

Genomic analysis of a pre-elimination Malaysian Plasmodium vivax population reveals selective pressures and changing transmission dynamics. (2018) Auburn, Sarah; Benavente, Ernest D; Miotto, Olivo; Pearson, Richard D; Amato, Roberto; Grigg, Matthew J; Barber, Bridget E; William, Timothy; Handayuni, Irene; Marfurt, Jutta; Trimarsanto, Hidayat; Noviyanti, Rintis; Sriprawat, Kanlaya; Nosten, Francois; Campino, Susana; Clark, Taane G; Anstey, Nicholas M; Kwiatkowski, Dominic P; Price, Ric N

Complete Genome Sequence of Buffalopox Virus. (2018) Afrough, Babak; Zafar, Afia; Hasan, Rumina; Hewson, Roger

New insights into leishmaniasis in the immunosuppressed. (2018) Akuffo, Hannah; Costa, Carlos; van Griensven, Johan; Burza, Sakib; Moreno, Javier; Herrero, Mercè

The ecology of immune state in a wild mammal, Mus musculus domesticus. (2018) Abolins, Stephen; Lazarou, Luke; Weldon, Laura; Hughes, Louise; King, Elizabeth C; Drescher, Paul; Pocock, Michael JO; Hafalla, Julius CR; Riley, Eleanor M; Viney, Mark

B

Changes in H3K27ac following lipopolysaccharide stimulation of nasopharyngeal epithelial cells. (2018) Borghini, Lisa; Hibberd, Martin; Davila, Sonia

Functional antibodies against Plasmodium falciparum sporozoites are associated with a longer time to qPCR-detected infection among schoolchildren in Burkina Faso. (2018) Barry, Aissata; Behet, Marije C; Nébié, Issa; Lanke, Kjerstin; Grignard, Lynn; Ouedraogo, Alphonse; Soulama, Issiaka; Drakeley, Chris; Sauerwein, Robert; Bolscher, Judith M; Dechering, Koen J; Bousema, Teun; Tiono, Alfred B; Gonçalves, Bronner P

Functional antibodies against Plasmodium falciparum sporozoites are associated with a longer time to qPCR-detected infection among schoolchildren in Burkina Faso. (2018) Barry, Aissata; Behet, Marije C; Nébié, Issa; Lanke, Kjerstin; Grignard, Lynn; Ouedraogo, Alphonse; Soulama, Issiaka; Drakeley, Chris; Sauerwein, Robert; Bolscher, Judith M; Dechering, Koen J; Bousema, Teun; Tiono, Alfred B; Gonçalves, Bronner P

Essentiality of Plasmodium falciparum plasmepsin V. (2018) Boonyalai, Nonlawat; Collins, Christine R; Hackett, Fiona; Withers-Martinez, Chrislaine; Blackman, Michael J

Global genetic diversity of var2csa in Plasmodium falciparum with implications for malaria in pregnancy and vaccine development. (2018) Benavente, Ernest Diez; Oresegun, Damilola R; de Sessions, Paola Florez; Walker, Eloise M; Roper, Cally; Dombrowski, Jamille G; de Souza, Rodrigo M; Marinho, Claudio RF; Sutherland, Colin J; Hibberd, Martin L; Mohareb, Fady; Baker, David A; Clark, Taane G; Campino, Susana

Global expansion of Mycobacterium tuberculosis lineage 4 shaped by colonial migration and local adaptation. (2018) Brynildsrud, Ola B; Pepperell, Caitlin S; Suffys, Philip; Grandjean, Louis; Monteserin, Johana; Debech, Nadia; Bohlin, Jon; Alfsnes, Kristian; Pettersson, John O-H; Kirkeleite, Ingerid; Fandinho, Fatima; da Silva, Marcia Aparecida; Perdigao, Joao; Portugal, Isabel; Viveiros, Miguel; Clark, Taane; Caws, Maxine; Dunstan, Sarah; Thai, Phan Vuong Khac; Lopez, Beatriz; Ritacco, Viviana; Kitchen, Andrew; Brown, Tyler S; van Soolingen, Dick; O'Neill, Mary B; Holt, Kathryn E; Feil, Edward J; Mathema, Barun; Balloux, Francois; Eldholm, Vegard

Function and essentiality of <i>Plasmodium falciparum</i> plasmepsin V. (2018) Boonyalai, Nonlawat; Collins, Christine R; Hackett, Fiona; Withers-Martinez, Chrislaine; Blackman, Michael J

Heterologous effects of infant BCG vaccination: potential mechanisms of immunity. (2018) Butkeviciute, Egle; Jones, Christine E; Smith, Steven G

The behaviour of recently hatched Tobago glass frog tadpoles. (2018) Byrne, Isabel; Judge, Christy; Downie, Roger J

An outbreak of a rare Shiga-toxin-producing Escherichia coli serotype (O117:H7) among men who have sex with men. (2018) Baker, Kate S; Dallman, Timothy J; Thomson, Nicholas R; Jenkins, Claire

Microevolution and Patterns of Transmission of Shigella sonnei within Cyclic Outbreaks Shigellosis, Israel. (2018) Behar, Adi; Baker, Kate Susan; Bassal, Ravit; Ezernitchi, Analia; Valinsky, Lea; Thomson, Nicholas R; Cohen, Daniel

Identifying Recrudescent Plasmodium falciparum in Treated Malaria Patients by Real-time PCR and High Resolution Melt Analysis of Genetic Diversity. (2018) Beshir, Khalid B; Diallo, Nouhoum; Sutherland, Colin J

Turtle activity monitoring within North-East Tobago. (2018) Byrne, Isabel; Loughrey, Ciara; McLelland, Jade; Downie, Roger J

Predicting the likelihood and intensity of mosquito infection from sex specific Plasmodium falciparum gametocyte density. (2018) Bradley, John; Stone, Will; Da, Dari F; Morlais, Isabelle; Dicko, Alassane; Cohuet, Anna; Guelbeogo, Wamdaogo M; Mahamar, Almahamoudou; Nsango, Sandrine; Soumaré, Harouna M; Diawara, Halimatou; Lanke, Kjerstin; Graumans, Wouter; Siebelink-Stoter, Rianne; van de Vegte-Bolmer, Marga; Chen, Ingrid; Tiono, Alfred; Gonçalves, Bronner Pamplona; Gosling, Roland; Sauerwein, Robert W; Drakeley, Chris; Churcher, Thomas S; Bousema, Teun

Comparative sequence analysis of the capsular polysaccharide loci of Actinobacillus pleuropneumoniae serovars 1-18, and development of two multiplex PCRs for comprehensive capsule typing. (2018) Bossé, Janine T; Li, Yanwen; Fernandez Crespo, Roberto; Lacouture, Sonia; Gottschalk, Marcelo; Sárközi, Rita; Fodor, László; Casas Amoribieta, Maria; Angen, Øystein; Nedbalcova, Katerina; Holden, Matthew TG; Maskell, Duncan J; Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; BRaDP1T consortium

Genomic insights into the emergence and spread of antimicrobial-resistant bacterial pathogens. (2018) Baker, Stephen; Thomson, Nicholas; Weill, François-Xavier; Holt, Kathryn E

Detection of malaria sporozoites expelled during mosquito sugar feeding. (2018) Brugman, VA; Kristan, M; Gibbins, MP; Angrisano, F; Sala, KA; Dessens, JT; Blagborough, AM; Walker, T

Comparing the Clinical Severity of Disease Caused by Enteroviruses and Human Parechoviruses in Neonates and Infants. (2018) Black, Sally; Bradley, Carina; Lai, Florence Y; Shenoy, Savitha; Bandi, Srini; Allen, David J; Tang, Julian W

Genomic epidemiology of Shigella in the United Kingdom shows transmission of pathogen sublineages and determinants of antimicrobial resistance. (2018) Baker, Kate S; Dallman, Timothy J; Field, Nigel; Childs, Tristan; Mitchell, Holly; Day, Martin; Weill, François-Xavier; Lefèvre, Sophie; Tourdjman, Mathieu; Hughes, Gwenda; Jenkins, Claire; Thomson, Nicholas

Laboratory and molecular surveillance of paediatric typhoidal Salmonella in Nepal: Antimicrobial resistance and implications for vaccine policy. (2018) Britto, Carl D; Dyson, Zoe A; Duchene, Sebastian; Carter, Michael J; Gurung, Meeru; Kelly, Dominic F; Murdoch, David R; Ansari, Imran; Thorson, Stephen; Shrestha, Shrijana; Adhikari, Neelam; Dougan, Gordon; Holt, Kathryn E; Pollard, Andrew J

Correlation of Xpert MTB/RIF with measures to assess Mycobacterium tuberculosis bacillary burden in high HIV burden areas of Southern Africa. (2018) Beynon, Fenella; Theron, Grant; Respeito, Durval; Mambuque, Edson; Saavedra, Belen; Bulo, Helder; Sanz, Sergi; Dheda, Keertan; Garcia-Basteiro, Alberto L

Horizontal antimicrobial resistance transfer drives epidemics of multiple Shigella species. (2018) Baker, Kate S; Dallman, Timothy J; Field, Nigel; Childs, Tristan; Mitchell, Holly; Day, Martin; Weill, François-Xavier; Lefèvre, Sophie; Tourdjman, Mathieu; Hughes, Gwenda; Jenkins, Claire; Thomson, Nicholas

Proposal of serovars 17 and 18 of Actinobacillus pleuropneumoniae based on serological and genotypic analysis. (2018) Bossé, Janine T; Li, Yanwen; Sárközi, Rita; Fodor, László; Lacouture, Sonia; Gottschalk, Marcelo; Casas Amoribieta, Maria; Angen, Øystein; Nedbalcova, Katerina; Holden, Matthew TG; Maskell, Duncan J; Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; BRaDP1T consortium

Severity of Chagasic Cardiomyopathy Is Associated With Response to a Novel Rapid Diagnostic Test for Trypanosoma cruzi TcII/V/VI. (2018) Bhattacharyya, Tapan; Messenger, Louisa A; Bern, Caryn; Mertens, Pascal; Gilleman, Quentin; Zeippen, Nicolas; Bremer Hinckel, Bruno C; Murphy, Niamh; Gilman, Robert H; Miles, Michael A; Chagas Working Group in Bolivia and Peru

Synthesis, anti-bacterial and anti-protozoal activities of amidinobenzimidazole derivatives and their interactions with DNA and RNA. (2018) Bistrović, Andrea; Krstulović, Luka; Stolić, Ivana; Drenjančević, Domagoj; Talapko, Jasminka; Taylor, Martin C; Kelly, John M; Bajić, Miroslav; Raić-Malić, Silvana

C

Know Your Heart: Rationale, design and conduct of a cross-sectional study of cardiovascular structure, function and risk factors in 4500 men and women aged 35-69 years from two Russian cities, 2015-18. (2018) Cook, Sarah; Malyutina, Sofia; Kudryavtsev, Alexander V; Averina, Maria; Bobrova, Natalia; Boytsov, Sergey; Brage, Soren; Clark, Taane G; Diez Benavente, Ernest; Eggen, Anne Elise; Hopstock, Laila A; Hughes, Alun; Johansen, Heidi; Kholmatova, Kamila; Kichigina, Anastasiya; Kontsevaya, Anna; Kornev, Michael; Leong, Darryl; Magnus, Per; Mathiesen, Ellisiv; McKee, Martin; Morgan, Katy; Nilssen, Odd; Plakhov, Ilya; Quint, Jennifer K; Rapala, Alicja; Ryabikov, Andrey; Saburova, Lyudmila; Schirmer, Henrik; Shapkina, Marina; Shiekh, Suhail; Shkolnikov, Vladimir M; Stylidis, Michael; Voevoda, Michael; Westgate, Kate; Leon, David A

A forward genetic screen reveals a primary role for Plasmodium falciparum Reticulocyte Binding Protein Homologue 2a and 2b in determining alternative erythrocyte invasion pathways. (2018) Campino, Susana; Marin-Menendez, Alejandro; Kemp, Alison; Cross, Nadia; Drought, Laura; Otto, Thomas D; Benavente, Ernest Diez; Ravenhall, Matt; Schwach, Frank; Girling, Gareth; Manske, Magnus; Theron, Michel; Gould, Kelda; Drury, Eleanor; Clark, Taane G; Kwiatkowski, Dominic P; Pance, Alena; Rayner, Julian C

Risk factors for Plasmodium falciparum infection in the Kenyan Highlands: a cohort study. (2018) Cook, Jackie; Owaga, Chrispin; Marube, Elizabeth; Baidjoe, Amrish; Stresman, Gillian; Migiro, Robin; Cox, Jon; Drakeley, Chris; Stevenson, Jennifer C

Clinical Validation of a Commercial LAMP Test for Ruling out Malaria in Returning Travelers: A Prospective Diagnostic Trial. (2018) Cheaveau, James; Nguyen, Hong; Chow, Barbara; Marasinghe, Dewdunee; Mohon, Abu Naser; Yuan, Hong; Viana, Gisele; van Schalkwyk, Donelly; Church, Deirdre; Chan, Wilson; Pillai, Dylan R

Zika might not be acting alone: Using an ecological study approach to investigate potential co-acting risk factors for an unusual pattern of microcephaly in Brazil. (2018) Campos, Monica C; Dombrowski, Jamille G; Phelan, Jody; Marinho, Claudio RF; Hibberd, Martin; Clark, Taane G; Campino, Susana

Morphological, genomic and transcriptomic responses of Klebsiella pneumoniae to the last-line antibiotic colistin. (2018) Cain, Amy K; Boinett, Christine J; Barquist, Lars; Dordel, Janina; Fookes, Maria; Mayho, Matthew; Ellington, Matthew J; Goulding, David; Pickard, Derek; Wick, Ryan R; Holt, Kathryn E; Parkhill, Julian; Thomson, Nicholas R

The convergent epidemiology of tuberculosis and human cytomegalovirus infection. (2018) Cobelens, Frank; Nagelkerke, Nico; Fletcher, Helen

Author Correction: Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis. (2018) Coll, Francesc; Phelan, Jody; Hill-Cawthorne, Grant A; Nair, Mridul B; Mallard, Kim; Ali, Shahjahan; Abdallah, Abdallah M; Alghamdi, Saad; Alsomali, Mona; Ahmed, Abdallah O; Portelli, Stephanie; Oppong, Yaa; Alves, Adriana; Bessa, Theolis Barbosa; Campino, Susana; Caws, Maxine; Chatterjee, Anirvan; Crampin, Amelia C; Dheda, Keertan; Furnham, Nicholas; Glynn, Judith R; Grandjean, Louis; Ha, Dang Minh; Hasan, Rumina; Hasan, Zahra; Hibberd, Martin L; Joloba, Moses; Jones-López, Edward C; Matsumoto, Tomoshige; Miranda, Anabela; Moore, David J; Mocillo, Nora; Panaiotov, Stefan; Parkhill, Julian; Penha, Carlos; Perdigão, João; Portugal, Isabel; Rchiad, Zineb; Robledo, Jaime; Sheen, Patricia; Shesha, Nashwa Talaat; Sirgel, Frik A; Sola, Christophe; Sousa, Erivelton Oliveira; Streicher, Elizabeth M; Van Helden, Paul; Viveiros, Miguel; Warren, Robert M; McNerney, Ruth; Pain, Arnab; Clark, Taane G

Expanding the toolbox for Trypanosoma cruzi: A parasite line incorporating a bioluminescence-fluorescence dual reporter and streamlined CRISPR/Cas9 functionality for rapid in vivo localisation and phenotyping. (2018) Costa, Fernanda Cristina; Francisco, Amanda Fortes; Jayawardhana, Shiromani; Calderano, Simone Guedes; Lewis, Michael D; Olmo, Francisco; Beneke, Tom; Gluenz, Eva; Sunter, Jack; Dean, Samuel; Kelly, John Morrison; Taylor, Martin Craig

The convergent epidemiology of tuberculosis and human cytomegalovirus infection. (2018) Cobelens, Frank; Nagelkerke, Nico; Fletcher, Helen

Africa-wide evaluation of host biomarkers in QuantiFERON supernatants for the diagnosis of pulmonary tuberculosis. (2018) Chegou, Novel N; Sutherland, Jayne S; Namuganga, Anna-Ritah; Corstjens, Paul Lam; Geluk, Annemieke; Gebremichael, Gebremedhin; Mendy, Joseph; Malherbe, Stephanus; Stanley, Kim; van der Spuy, Gian D; Kriel, Magdalena; Loxton, Andre G; Kriel, Belinda; Simukonda, Felanji; Bekele, Yonas; Sheehama, Jacob A; Nelongo, Josefina; van der Vyver, Marieta; Gebrexabher, Atsbeha; Hailu, Habteyes; Esterhuyse, Maria M; Rosenkrands, Ida; Aagard, Claus; Kidd, Martin; Kassa, Desta; Mihret, Adane; Howe, Rawleigh; Cliff, Jacqueline M; Crampin, Amelia C; Mayanja-Kizza, Harriet; Kaufmann, Stefan HE; Dockrell, Hazel M; Ottenhoff, Tom HM; Walzl, Gerhard; AE-TBC consortium

Decoding the network of Trypanosoma brucei proteins that determines sensitivity to apolipoprotein-L1. (2018) Currier, Rachel B; Cooper, Anneli; Burrell-Saward, Hollie; MacLeod, Annette; Alsford, Sam

D

Multi-population genomic analysis of malaria parasites indicates local selection and differentiation at the gdv1 locus regulating sexual development. (2018) Duffy, Craig W; Amambua-Ngwa, Alfred; Ahouidi, Ambroise D; Diakite, Mahamadou; Awandare, Gordon A; Ba, Hampate; Tarr, Sarah J; Murray, Lee; Stewart, Lindsay B; D'Alessandro, Umberto; Otto, Thomas D; Kwiatkowski, Dominic P; Conway, David J

A high throughput screen for next-generation leads targeting malaria parasite transmission. (2018) Delves, Michael J; Miguel-Blanco, Celia; Matthews, Holly; Molina, Irene; Ruecker, Andrea; Yahiya, Sabrina; Straschil, Ursula; Abraham, Matthew; León, María Luisa; Fischer, Oliver J; Rueda-Zubiaurre, Ainoa; Brandt, Jochen R; Cortés, Álvaro; Barnard, Anna; Fuchter, Matthew J; Calderón, Félix; Winzeler, Elizabeth A; Sinden, Robert E; Herreros, Esperanza; Gamo, Francisco J; Baum, Jake

Essential role of Plasmodium perforin-like protein 4 in ookinete midgut passage. (2018) Deligianni, Elena; Silmon de Monerri, Natalie C; McMillan, Paul J; Bertuccini, Lucia; Superti, Fabiana; Manola, Maria; Spanos, Lefteris; Louis, Christos; Blackman, Michael J; Tilley, Leann; Siden-Kiamos, Inga

Antimalarial Transmission-Blocking Interventions: Past, Present, and Future. (2018) Delves, MJ; Angrisano, F; Blagborough, AM

Inferring demographic parameters in bacterial genomic data using Bayesian and hybrid phylogenetic methods. (2018) Duchene, Sebastian; Duchene, David A; Geoghegan, Jemma L; Dyson, Zoe A; Hawkey, Jane; Holt, Kathryn E

Defining endemic cholera at three levels of spatiotemporal resolution within Bangladesh. (2018) Domman, Daryl; Chowdhury, Fahima; Khan, Ashraful I; Dorman, Matthew J; Mutreja, Ankur; Uddin, Muhammad Ikhtear; Paul, Anik; Begum, Yasmin A; Charles, Richelle C; Calderwood, Stephen B; Bhuiyan, Taufiqur R; Harris, Jason B; LaRocque, Regina C; Ryan, Edward T; Qadri, Firdausi; Thomson, Nicholas R

Gametocyte Development and Carriage in Ghanaian Individuals with Uncomplicated Plasmodium falciparum Malaria. (2018) Dinko, Bismarck; Ansah, Felix; Agyare-Kwabi, Comfort; Tagboto, Senyo; Amoah, Linda Eva; Urban, Britta C; Sutherland, Colin J; Awandare, Gordon A; Williamson, Kim C; Binka, Fred N; Deitsch, Kirk W

A Serum Circulating miRNA Signature for Short-Term Risk of Progression to Active Tuberculosis Among Household Contacts. (2018) Duffy, Fergal J; Thompson, Ethan; Downing, Katrina; Suliman, Sara; Mayanja-Kizza, Harriet; Boom, W Henry; Thiel, Bonnie; Weiner Iii, January; Kaufmann, Stefan HE; Dover, Drew; Tabb, David L; Dockrell, Hazel M; Ottenhoff, Tom HM; Tromp, Gerard; Scriba, Thomas J; Zak, Daniel E; Walzl, Gerhard; GC6-74 Consortium

Social determinants and BCG efficacy: a call for a socio-biological approach to TB prevention. (2018) Dowd, Jennifer B; Fletcher, Helen A; Boccia, Delia

Antibacterial and Sterilizing Effect of Benzylpenicillin in Tuberculosis. (2018) Deshpande, Devyani; Srivastava, Shashikant; Bendet, Paula; Martin, Katherine R; Cirrincione, Kayle N; Lee, Pooi S; Pasipanodya, Jotam G; Dheda, Keertan; Gumbo, Tawanda

Use of zebrafish to study Shigella infection. (2018) Duggan, Gina M; Mostowy, Serge

Genome-wide mosaicism in divergence between zoonotic malaria parasite subpopulations with separate sympatric transmission cycles. (2018) Divis, Paul CS; Duffy, Craig W; Kadir, Khamisah A; Singh, Balbir; Conway, David J

E

Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase. (2018) Ezewudo, Matthew; Borens, Amanda; Chiner-Oms, Álvaro; Miotto, Paolo; Chindelevitch, Leonid; Starks, Angela M; Hanna, Debra; Liwski, Richard; Zignol, Matteo; Gilpin, Christopher; Niemann, Stefan; Kohl, Thomas Andreas; Warren, Robin M; Crook, Derrick; Gagneux, Sebastien; Hoffner, Sven; Rodrigues, Camilla; Comas, Iñaki; Engelthaler, David M; Alland, David; Rigouts, Leen; Lange, Christoph; Dheda, Keertan; Hasan, Rumina; McNerney, Ruth; Cirillo, Daniela M; Schito, Marco; Rodwell, Timothy C; Posey, James

F

The Streptococcos suis sortases SrtB and SrtF are essential for disease in pigs. (2018) Faulds-Pain, Alexandra; Shaw, Helen Alexandra; Terra, Vanessa Sofia; Kellner, Steven; Brockmeier, Susan L; Wren, Brendan W

Systems approaches to correlates of protection and progression to TB disease. (2018) Fletcher, Helen A

Epistasis studies reveal redundancy among calcium-dependent protein kinases in motility and invasion of malaria parasites. (2018) Fang, Hanwei; Gomes, Ana Rita; Klages, Natacha; Pino, Paco; Maco, Bohumil; Walker, Eloise M; Zenonos, Zenon A; Angrisano, Fiona; Baum, Jake; Doerig, Christian; Baker, David A; Billker, Oliver; Brochet, Mathieu

Assessing the Effectiveness of Curative Benznidazole Treatment in Preventing Chronic Cardiac Pathology in Experimental Models of Chagas Disease. (2018) Francisco, Amanda Fortes; Jayawardhana, Shiromani; Taylor, Martin C; Lewis, Michael D; Kelly, John M

Xapuri virus, a novel mammarenavirus: natural reassortment and increased diversity between New World viruses. (2018) Fernandes, Jorlan; Guterres, Alexandro; de Oliveira, Renata Carvalho; Chamberlain, John; Lewandowski, Kuiama; Teixeira, Bernardo Rodrigues; Coelho, Thayssa Alves; Crisóstomo, Charle Ferreira; Bonvicino, Cibele Rodrigues; D'Andrea, Paulo Sérgio; Hewson, Roger; de Lemos, Elba Regina Sampaio

Use of mobile technology-based participatory mapping approaches to geolocate health facility attendees for disease surveillance in low resource settings. (2018) Fornace, Kimberly M; Surendra, Henry; Abidin, Tommy Rowel; Reyes, Ralph; Macalinao, Maria LM; Stresman, Gillian; Luchavez, Jennifer; Ahmad, Riris A; Supargiyono, Supargiyono; Espino, Fe; Drakeley, Chris J; Cook, Jackie

Increased detection of human parechovirus infection in infants in England during 2016: epidemiology and clinical characteristics. (2018) Ferreras Antolín, Laura; Kadambari, Seilesh; Braccio, Serena; Tang, Julian Wei-Tze; Xerry, Jacqueline; Allen, David James; Ladhani, Shamez N; Parechovirus Surveillance Network

VALIDATE: Exploiting the synergy between complex intracellular pathogens to expedite vaccine research and development for tuberculosis, leishmaniasis, melioidosis and leprosy. (2018) Fletcher, Helen A; Chatterjee, Mitali; Cooper, Andrea; Hussell, Tracy; Kaye, Paul M; Prior, Joann; Reljic, Rajko; Vermaak, Samantha; Vordermeier, Martin; Williams, Ann; McShane, Helen

Exposure and infection to Plasmodium knowlesi in case study communities in Northern Sabah, Malaysia and Palawan, The Philippines. (2018) Fornace, Kimberly M; Herman, Lou S; Abidin, Tommy R; Chua, Tock Hing; Daim, Sylvia; Lorenzo, Pauline J; Grignard, Lynn; Nuin, Nor Afizah; Ying, Lau Tiek; Grigg, Matthew J; William, Timothy; Espino, Fe; Cox, Jonathan; Tetteh, Kevin KA; Drakeley, Chris J

Comparative Heterochromatin Profiling Reveals Conserved and Unique Epigenome Signatures Linked to Adaptation and Development of Malaria Parasites. (2018) Fraschka, Sabine A; Filarsky, Michael; Hoo, Regina; Niederwieser, Igor; Yam, Xue Yan; Brancucci, Nicolas MB; Mohring, Franziska; Mushunje, Annals T; Huang, Ximei; Christensen, Peter R; Nosten, Francois; Bozdech, Zbynek; Russell, Bruce; Moon, Robert W; Marti, Matthias; Preiser, Peter R; Bártfai, Richárd; Voss, Till S

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Genomic Surveillance of Enterococcus faecium Reveals Limited Sharing of Strains and Resistance Genes between Livestock and Humans in the United Kingdom. (2018) Gouliouris, Theodore; Raven, Kathy E; Ludden, Catherine; Blane, Beth; Corander, Jukka; Horner, Carolyne S; Hernandez-Garcia, Juan; Wood, Paul; Hadjirin, Nazreen F; Radakovic, Milorad; Holmes, Mark A; de Goffau, Marcus; Brown, Nicholas M; Parkhill, Julian; Peacock, Sharon J

Accuracy of diabetes screening methods used for people with tuberculosis, Indonesia, Peru, Romania, South Africa. (2018) Grint, Daniel; Alisjhabana, Bachti; Ugarte-Gil, Cesar; Riza, Anca-Leila; Walzl, Gerhard; Pearson, Fiona; Ruslami, Rovina; Moore, David AJ; Ioana, Mihai; McAllister, Susan; Ronacher, Katharina; Koeseomadinata, Raspati C; Kerry-Barnard, Sarah R; Coronel, Jorge; Malherbe, Stephanus T; Dockrell, Hazel M; Hill, Philip C; Van Crevel, Reinout; Critchley, Julia A; TANDEM consortium

Taking Sharper Pictures of Malaria with CAMERAs: Combined Antibodies to Measure Exposure Recency Assays. (2018) Greenhouse, Bryan; Smith, David L; Rodríguez-Barraquer, Isabel; Mueller, Ivo; Drakeley, Chris J

Computationally-guided drug repurposing enables the discovery of kinase targets and inhibitors as new schistosomicidal agents. (2018) Giuliani, Sandra; Silva, Arthur C; Borba, Joyce VVB; Ramos, Pablo IP; Paveley, Ross A; Muratov, Eugene N; Andrade, Carolina Horta; Furnham, Nicholas

Investigating Permeation Behavior of Flufenamic Acid Cocrystals Using a Dissolution and Permeation System. (2018) Guo, Minshan; Wang, Ke; Qiao, Ning; Yardley, Vanessa; Li, Mingzhong

Antimicrobial-Resistant Klebsiella pneumoniae Carriage and Infection in Specialized Geriatric Care Wards Linked to Acquisition in the Referring Hospital. (2018) Gorrie, Claire L; Mirceta, Mirjana; Wick, Ryan R; Judd, Louise M; Wyres, Kelly L; Thomson, Nicholas R; Strugnell, Richard A; Pratt, Nigel F; Garlick, Jill S; Watson, Kerrie M; Hunter, Peter C; McGloughlin, Steve A; Spelman, Denis W; Jenney, Adam WJ; Holt, Kathryn E

Missed treatment opportunities and barriers to comprehensive treatment for sexual violence survivors in Kenya: a mixed methods study. (2018) Gatuguta, Anne; Merrill, Katherine G; Colombini, Manuela; Soremekun, Seyi; Seeley, Janet; Mwanzo, Isaac; Devries, Karen

World TB Day 2018: The Challenge of Drug Resistant Tuberculosis. (2018) Gupta-Wright, Ankur; Tomlinson, Gillian S; Rangaka, Molebogeng X; Fletcher, Helen A

Transmission of molecularly undetectable circulating parasite clones leads to high infection complexity in mosquitoes post feeding. (2018) Grignard, Lynn; Gonçalves, Bronner P; Early, Angela M; Daniels, Rachel F; Tiono, Alfred B; Guelbéogo, Wamdaogo M; Ouédraogo, Alphonse; van Veen, Elke M; Lanke, Kjerstin; Diarra, Amidou; Nebie, Issa; Sirima, Sodiomon B; Targett, Geoff A; Volkman, Sarah K; Neafsey, Daniel E; Wirth, Dyann F; Bousema, Teun; Drakeley, Chris

Age-Related Clinical Spectrum of Plasmodium knowlesi Malaria and Predictors of Severity. (2018) Grigg, Matthew J; William, Timothy; Barber, Bridget E; Rajahram, Giri S; Menon, Jayaram; Schimann, Emma; Piera, Kim; Wilkes, Christopher S; Patel, Kaajal; Chandna, Arjun; Drakeley, Christopher J; Yeo, Tsin W; Anstey, Nicholas M

Tetrasubstituted Imidazolium Salts as Potent Antiparasitic Agents against African and American Trypanosomiases. (2018) Ghashghaei, Ouldouz; Kielland, Nicola; Revés, Marc; Taylor, Martin C; Kelly, John M; Di Pietro, Ornella; Muñoz-Torrero, Diego; Pérez, Belén; Lavilla, Rodolfo

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Transient temperature fluctuations severely decrease P. falciparum susceptibility to artemisinin in vitro. (2018) Henrici, Ryan C; van Schalkwyk, Donelly A; Sutherland, Colin J

Alternative pathway to reduced artemisinin susceptibility in Plasmodium falciparum. (2018) Henrici, Ryan C; Sutherland, Colin J description

Evolution of a clade of Acinetobacter baumannii global clone 1, lineage 1 via acquisition of carbapenem- and aminoglycoside-resistance genes and dispersion of ISAba1. (2018) Hamidian, Mohammad; Hawkey, Jane; Wick, Ryan; Holt, Kathryn E; Hall, Ruth M

Differential DNA methylation of potassium channel KCa3.1 and immune signalling pathways is associated with infant immune responses following BCG vaccination. (2018) Hasso-Agopsowicz, Mateusz; Scriba, Thomas J; Hanekom, Willem A; Dockrell, Hazel M; Smith, Steven G

SLING: a tool to search for linked genes in bacterial datasets. (2018) Horesh, Gal; Harms, Alexander; Fino, Cinzia; Parts, Leopold; Gerdes, Kenn; Heinz, Eva; Thomson, Nicholas Robert

PrimedRPA: primer design for recombinase polymerase amplification assays. (2018) Higgins, Matthew; Ravenhall, Matt; Ward, Daniel; Phelan, Jody; Ibrahim, Amy; Forrest, Matthew S; Clark, Taane G; Campino, Susana

Human pharyngeal microbiota in age-related macular degeneration. (2018) Ho, Eliza Xin Pei; Cheung, Chui Ming Gemmy; Sim, Shuzhen; Chu, Collins Wenhan; Wilm, Andreas; Lin, Clarabelle Bitong; Mathur, Ranjana; Wong, Doric; Chan, Choi Mun; Bhagarva, Mayuri; Laude, Augustinus; Lim, Tock Han; Wong, Tien Yin; Cheng, Ching Yu; Davila, Sonia; Hibberd, Martin

Diagnostic accuracy of a prototype rapid chlamydia and gonorrhoea recombinase polymerase amplification assay: a multicentre cross-sectional preclinical evaluation. (2018) Harding-Esch, EM; Fuller, SS; Chow, S-LC; Nori, AV; Harrison, MA; Parker, M; Piepenburg, O; Forrest, MS; Brooks, DG; Patel, R; Hay, PE; Fearnley, N; Pond, MJ; Dunbar, JK; Butcher, PD; Planche, T; Lowndes, CM; Sadiq, ST

Frequent transmission of the Mycobacterium tuberculosis Beijing lineage and positive selection for the EsxW Beijing variant in Vietnam. (2018) Holt, Kathryn E; McAdam, Paul; Thai, Phan Vuong Khac; Thuong, Nguyen Thuy Thuong; Ha, Dang Thi Minh; Lan, Nguyen Ngoc; Lan, Nguyen Huu; Nhu, Nguyen Thi Quynh; Hai, Hoang Thanh; Ha, Vu Thi Ngoc; Thwaites, Guy; Edwards, David J; Nath, Artika P; Pham, Kym; Ascher, David B; Farrar, Jeremy; Khor, Chiea Chuen; Teo, Yik Ying; Inouye, Michael; Caws, Maxine; Dunstan, Sarah J

Production and efficacy of a low-cost recombinant pneumococcal protein polysaccharide conjugate vaccine. (2018) Herbert, Jenny A; Kay, Emily J; Faustini, Sian E; Richter, Alex; Abouelhadid, Sherif; Cuccui, Jon; Wren, Brendan; Mitchell, Timothy J

Methionine biosynthesis and transport are functionally redundant for the growth and virulence of Salmonella Typhimurium. (2018) Husna, Asma Ul; Wang, Nancy; Cobbold, Simon A; Newton, Hayley J; Hocking, Dianna M; Wilksch, Jonathan J; Scott, Timothy A; Davies, Mark R; Hinton, Jay C; Tree, Jai J; Lithgow, Trevor; McConville, Malcolm J; Strugnell, Richard A

Identification and validation of a novel panel of Plasmodium knowlesi biomarkers of serological exposure. (2018) Herman, Lou S; Fornace, Kimberly; Phelan, Jody; Grigg, Matthew J; Anstey, Nicholas M; William, Timothy; Moon, Robert W; Blackman, Michael J; Drakeley, Chris J; Tetteh, Kevin KA

Evolution of carbapenem resistance in Acinetobacter baumannii during a prolonged infection. (2018) Hawkey, Jane; Ascher, David B; Judd, Louise M; Wick, Ryan R; Kostoulias, Xenia; Cleland, Heather; Spelman, Denis W; Padiglione, Alex; Peleg, Anton Y; Holt, Kathryn E

Recommendations for enterovirus diagnostics and characterisation within and beyond Europe. (2018) Harvala, Heli; Broberg, Eeva; Benschop, Kimberley; Berginc, Natasa; Ladhani, Shamez; Susi, Petri; Christiansen, Claus; McKenna, James; Allen, David; Makiello, Phoebe; McAllister, Georgina; Carmen, Mirabelli; Zakikhany, Katherina; Dyrdak, Robert; Nielsen, Xiaohui; Madsen, Tina; Paul, Joel; Moore, Catherine; von Eije, Karin; Piralla, Antonio; Carlier, Mieke; Vanoverschelde, Laura; Poelman, Randy; Anton, Andrés; López-Labrador, F Xavier; Pellegrinelli, Laura; Keeren, Kathrin; Maier, Melanie; Cassidy, Hayley; Derdas, Stavros; Savolainen-Kopra, Carita; Diedrich, Sabine; Nordbø, Svein; Buesa, Javier; Bailly, Jean-Luc; Baldanti, Fausto; MacAdam, Andrew; Mirand, Audrey; Dudman, Susanne; Schuffenecker, Isabelle; Kadambari, Seilesh; Neyts, Johan; Griffiths, Michael J; Richter, Jan; Margaretto, Cristina; Govind, Sheila; Morley, Ursula; Adams, Ortwin; Krokstad, Sidsel; Dean, Jonathan; Pons-Salort, Margarita; Prochazka, Birgit; Cabrerizo, Maria; Majumdar, Manasi; Nebbia, Gaia; Wiewel, Maryse; Cottrell, Simon; Coyle, Peter; Martin, Javier; Moore, Catrin; Midgley, Sofie; Horby, Peter; Wolthers, Katja; Simmonds, Peter; Niesters, Hubert; Fischer, Thea K

A 30-Min Nucleic Acid Amplification Point-of-Care Test for Genital Chlamydia trachomatis Infection in Women: A Prospective, Multi-center Study of Diagnostic Accuracy. (2018) Harding-Esch, EM; Cousins, EC; Chow, S-LC; Phillips, LT; Hall, CL; Cooper, N; Fuller, SS; Nori, AV; Patel, R; Thomas-William, S; Whitlock, G; Edwards, SJE; Green, M; Clarkson, J; Arlett, B; Dunbar, JK; Lowndes, CM; Sadiq, ST

New Syndromes Identified by Neuroimaging during Cerebral Malaria. (2018) Hoffmann, Angelika; Wassmer, Samuel C

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Comprehensive longitudinal microbiome analysis of the chicken cecum reveals a shift from competitive to environmental drivers and a window of opportunity for <i>Campylobacter</i>. (2018) Ijaz, Umer Zeeshan; Sivaloganathan, Lojika; Mckenna, Aaron; Richmond, Anne; Kelly, Carmel; Linton, Mark; Stratakos, Alexandros; Lavery, Ursula; Elmi, Abdi; Wren, Brendan; Dorrell, Nick; Corcionivoschi, Nicolae; Gundogdu, Ozan

Comprehensive Longitudinal Microbiome Analysis of the Chicken Cecum Reveals a Shift From Competitive to Environmental Drivers and a Window of Opportunity for Campylobacter. (2018) Ijaz, Umer Zeeshan; Sivaloganathan, Lojika; McKenna, Aaron; Richmond, Anne; Kelly, Carmel; Linton, Mark; Stratakos, Alexandros Ch; Lavery, Ursula; Elmi, Abdi; Wren, Brendan W; Dorrell, Nick; Corcionivoschi, Nicolae; Gundogdu, Ozan

Dynamics of antimicrobial resistance in intestinal Escherichia coli from children in community settings in South Asia and sub-Saharan Africa. (2018) Ingle, Danielle J; Levine, Myron M; Kotloff, Karen L; Holt, Kathryn E; Robins-Browne, Roy M

Robust Phagocyte Recruitment Controls the Opportunistic Fungal Pathogen Mucor circinelloides in Innate Granulomas In Vivo. (2018) Inglesfield, Sarah; Jasiulewicz, Aleksandra; Hopwood, Matthew; Tyrrell, James; Youlden, George; Mazon-Moya, Maria; Millington, Owain R; Mostowy, Serge; Jabbari, Sara; Voelz, Kerstin

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Dihydroartemisinin-piperaquine for intermittent preventive treatment of malaria during pregnancy and risk of malaria in early childhood: A randomized controlled trial. (2018) Jagannathan, Prasanna; Kakuru, Abel; Okiring, Jaffer; Muhindo, Mary K; Natureeba, Paul; Nakalembe, Miriam; Opira, Bishop; Olwoch, Peter; Nankya, Felistas; Ssewanyana, Isaac; Tetteh, Kevin; Drakeley, Chris; Beeson, James; Reiling, Linda; Clark, Tamara D; Rodriguez-Barraquer, Isabel; Greenhouse, Bryan; Wallender, Erika; Aweeka, Francesca; Prahl, Mary; Charlebois, Edwin D; Feeney, Margaret E; Havlir, Diane V; Kamya, Moses R; Dorsey, Grant

Functional analysis of the Helicobacter pullorum N-linked protein glycosylation system. (2018) Jervis, Adrian J; Wood, Alison G; Cain, Joel A; Butler, Jonathan A; Frost, Helen; Lord, Elizabeth; Langdon, Rebecca; Cordwell, Stuart J; Wren, Brendan W; Linton, Dennis

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KILchip v1.0: A Novel Plasmodium falciparum Merozoite Protein Microarray to Facilitate Malaria Vaccine Candidate Prioritization. (2018) Kamuyu, Gathoni; Tuju, James; Kimathi, Rinter; Mwai, Kennedy; Mburu, James; Kibinge, Nelson; Chong Kwan, Marisa; Hawkings, Sam; Yaa, Reuben; Chepsat, Emily; Njunge, James M; Chege, Timothy; Guleid, Fatuma; Rosenkranz, Micha; Kariuki, Christopher K; Frank, Roland; Kinyanjui, Samson M; Murungi, Linda M; Bejon, Philip; Färnert, Anna; Tetteh, Kevin KA; Beeson, James G; Conway, David J; Marsh, Kevin; Rayner, Julian C; Osier, Faith HA

Enterovirus and parechovirus meningitis in infants younger than 90 days old in the UK and Republic of Ireland: a British Paediatric Surveillance Unit study. (2018) Kadambari, Seilesh; Braccio, Serena; Ribeiro, Sonia; Allen, David J; Pebody, Richard; Brown, David; Cunney, Robert; Sharland, Mike; Ladhani, Shamez

Septins Recognize and Entrap Dividing Bacterial Cells for Delivery to Lysosomes. (2018) Krokowski, Sina; Lobato-Márquez, Damián; Chastanet, Arnaud; Pereira, Pedro Matos; Angelis, Dimitrios; Galea, Dieter; Larrouy-Maumus, Gerald; Henriques, Ricardo; Spiliotis, Elias T; Carballido-López, Rut; Mostowy, Serge

Assessment of metagenomic Nanopore and Illumina sequencing for recovering whole genome sequences of chikungunya and dengue viruses directly from clinical samples. (2018) Kafetzopoulou, Liana E; Efthymiadis, Kyriakos; Lewandowski, Kuiama; Crook, Ant; Carter, Dan; Osborne, Jane; Aarons, Emma; Hewson, Roger; Hiscox, Julian A; Carroll, Miles W; Vipond, Richard; Pullan, Steven T

Characterising antibody avidity in individuals of varied Mycobacterium tuberculosis infection status using surface plasmon resonance. (2018) Kimuda, Simon G; Biraro, Irene Andia; Bagaya, Bernard S; Raynes, John G; Cose, Stephen folder_zip

Meningococcus serogroup C clonal complex ST-10217 outbreak in Zamfara State, Northern Nigeria. (2018) Kwambana-Adams, Brenda A; Amaza, Rahab C; Okoi, Catherine; Rabiu, Murtala; Worwui, Archibald; Foster-Nyarko, Ebenezer; Ebruke, Bernard; Sesay, Abdul K; Senghore, Madikay; Umar, Abdullahi S; Usman, Rabi; Atiku, Adamu; Abdullahi, Garba; Buhari, Yahaya; Sani, Rabiu; Bako, Husaini U; Abdullahi, Bashir; Yarima, Alliyu I; Sikiru, Badaru; Moses, Aderinola Olaolu; Popoola, Michael O; Ekeng, Eme; Olayinka, Adebola; Mba, Nwando; Kankia, Adamu; Mamadu, Ibrahim N; Okudo, Ifeanyi; Stephen, Mary; Ronveaux, Olivier; Busuttil, Jason; Mwenda, Jason M; Abdulaziz, Mohammed; Gummi, Sulaiman A; Adedeji, Adebayo; Bita, Andre; Omar, Linda; Djingarey, Mamoudou Harouna; Alemu, Wondimagegnehu; D'Alessandro, Umberto; Ihekweazu, Chikwe; Antonio, Martin

Glibenclamide Reduces Primary Human Monocyte Functions Against Tuberculosis Infection by Enhancing M2 Polarization. (2018) Kewcharoenwong, Chidchamai; Prabowo, Satria A; Bancroft, Gregory J; Fletcher, Helen A; Lertmemongkolchai, Ganjana

Using paired serology and surveillance data to quantify dengue transmission and control during a large outbreak in Fiji. (2018) Kucharski, Adam J; Kama, Mike; Watson, Conall H; Aubry, Maite; Funk, Sebastian; Henderson, Alasdair D; Brady, Oliver J; Vanhomwegen, Jessica; Manuguerra, Jean-Claude; Lau, Colleen L; Edmunds, W John; Aaskov, John; Nilles, Eric James; Cao-Lormeau, Van-Mai; Hué, Stéphane; Hibberd, Martin L

African Swine Fever Virus, Siberia, Russia, 2017. (2018) Kolbasov, Denis; Titov, Ilya; Tsybanov, Sodnom; Gogin, Andrey; Malogolovkin, Alexander

Evaluation of HIV-1 rapid tests and identification of alternative testing algorithms for use in Uganda. (2018) Kaleebu, Pontiano; Kitandwe, Paul Kato; Lutalo, Tom; Kigozi, Aminah; Watera, Christine; Nanteza, Mary Bridget; Hughes, Peter; Musinguzi, Joshua; Opio, Alex; Downing, Robert; Mbidde, Edward Katongole

Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya. (2018) Kiyuka, Patience K; Agoti, Charles N; Munywoki, Patrick K; Njeru, Regina; Bett, Anne; Otieno, James R; Otieno, Grieven P; Kamau, Everlyn; Clark, Taane G; van der Hoek, Lia; Kellam, Paul; Nokes, D James; Cotten, Matthew

Xpert® MTB/RIF assay for extrapulmonary tuberculosis and rifampicin resistance. (2018) Kohli, Mikashmi; Schiller, Ian; Dendukuri, Nandini; Dheda, Keertan; Denkinger, Claudia M; Schumacher, Samuel G; Steingart, Karen R

Mitochondria promote septin assembly into cages that entrap Shigella for autophagy. (2018) Krokowski, Sina; Lobato-Márquez, Damián; Mostowy, Serge

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Potent inhibitors of malarial P. Falciparum protein kinase G: Improving the cell activity of a series of imidazopyridines. (2018) Large, Jonathan M; Birchall, Kristian; Bouloc, Nathalie S; Merritt, Andy T; Smiljanic-Hurley, Ela; Tsagris, Denise J; Wheldon, Mary C; Ansell, Keith H; Coombs, Peter J; Kettleborough, Catherine A; Whalley, David; Stewart, Lindsay B; Bowyer, Paul W; Baker, David A; Osborne, Simon A

Complement Susceptibility in Relation to Genome Sequence of Recent Klebsiella pneumoniae Isolates from Thai Hospitals. (2018) Loraine, Jessica; Heinz, Eva; De Sousa Almeida, Jessica; Milevskyy, Oleksandr; Voravuthikunchai, Supayang P; Srimanote, Potjanee; Kiratisin, Pattarachai; Thomson, Nicholas R; Taylor, Peter W

Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae. (2018) Lam, Margaret MC; Wyres, Kelly L; Judd, Louise M; Wick, Ryan R; Jenney, Adam; Brisse, Sylvain; Holt, Kathryn E

Why large icosahedral viruses need scaffolding proteins. (2018) Li, Siyu; Roy, Polly; Travesset, Alex; Zandi, Roya

Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations. (2018) Lam, Margaret MC; Wick, Ryan R; Wyres, Kelly L; Gorrie, Claire L; Judd, Louise M; Jenney, Adam WJ; Brisse, Sylvain; Holt, Kathryn E

Imaging the development of chronic Chagas disease after oral transmission. (2018) Lewis, Michael D; Francisco, Amanda F; Jayawardhana, Shiromani; Langston, Harry; Taylor, Martin C; Kelly, John M

Influenza Virus Segment Composition Influences Viral Stability in the Environment. (2018) Labadie, Thomas; Batéjat, Christophe; Manuguerra, Jean-Claude; Leclercq, India

Cellular dissection of malaria parasite invasion of human erythrocytes using viable Plasmodium knowlesi merozoites. (2018) Lyth, Oliver; Vizcay-Barrena, Gema; Wright, Katherine E; Haase, Silvia; Mohring, Franziska; Najer, Adrian; Henshall, Isabelle G; Ashdown, George W; Bannister, Lawrence H; Drew, Damien R; Beeson, James G; Fleck, Roland A; Moon, Robert W; Wilson, Danny W; Baum, Jake

Genomic evidence that the live Chlamydia abortus vaccine strain 1B is not attenuated and has the potential to cause disease. (2018) Longbottom, David; Sait, Michelle; Livingstone, Morag; Laroucau, Karine; Sachse, Konrad; Harris, Simon R; Thomson, Nicholas R; Seth-Smith, Helena MB

Integrated pathogen load and dual transcriptome analysis of systemic host-pathogen interactions in severe malaria. (2018) Lee, Hyun Jae; Georgiadou, Athina; Walther, Michael; Nwakanma, Davis; Stewart, Lindsay B; Levin, Michael; Otto, Thomas D; Conway, David J; Coin, Lachlan J; Cunnington, Aubrey J

Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination. (2018) Lam, Margaret MC; Wyres, Kelly L; Duchêne, Sebastian; Wick, Ryan R; Judd, Louise M; Gan, Yunn-Hwen; Hoh, Chu-Han; Archuleta, Sophia; Molton, James S; Kalimuddin, Shirin; Koh, Tse Hsien; Passet, Virginie; Brisse, Sylvain; Holt, Kathryn E

Addressing diversity in tuberculosis using multidimensional approaches. (2018) Lerm, M; Dockrell, HM

Enrichment of Clinically Relevant Organisms in Spontaneous Preterm-Delivered Placentas and Reagent Contamination across All Clinical Groups in a Large Pregnancy Cohort in the United Kingdom. (2018) Leon, Lydia J; Doyle, Ronan; Diez-Benavente, Ernest; Clark, Taane G; Klein, Nigel; Stanier, Philip; Moore, Gudrun E

A requirement for septins and the autophagy receptor p62 in the proliferation of intracellular Shigella. (2018) Lobato-Márquez, Damián; Krokowski, Sina; Sirianni, Andrea; Larrouy-Maumus, Gerald; Mostowy, Serge

Transcriptomic Studies of Malaria: a Paradigm for Investigation of Systemic Host-Pathogen Interactions. (2018) Lee, Hyun Jae; Georgiadou, Athina; Otto, Thomas D; Levin, Michael; Coin, Lachlan J; Conway, David J; Cunnington, Aubrey J

Population-based analysis of ocular Chlamydia trachomatis in trachoma-endemic West African communities identifies genomic markers of disease severity. (2018) Last, AR; Pickering, H; Roberts, CH; Coll, F; Phelan, J; Burr, SE; Cassama, E; Nabicassa, M; Seth-Smith, HMB; Hadfield, J; Cutcliffe, LT; Clarke, IN; Mabey, DCW; Bailey, RL; Clark, TG; Thomson, NR; Holland, MJ

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Regulation of mycobacterial infection by macrophage Gch1 and tetrahydrobiopterin. (2018) McNeill, Eileen; Stylianou, Elena; Crabtree, Mark J; Harrington-Kandt, Rachel; Kolb, Anna-Lena; Diotallevi, Marina; Hale, Ashley B; Bettencourt, Paulo; Tanner, Rachel; O'Shea, Matthew K; Matsumiya, Magali; Lockstone, Helen; Müller, Julius; Fletcher, Helen A; Greaves, David R; McShane, Helen; Channon, Keith M

Detection of Immunoglobulin G1 Against rK39 Improves Monitoring of Treatment Outcomes in Visceral Leishmaniasis. (2018) Mollett, Guy; Bremer Hinckel, Bruno C; Bhattacharyya, Tapan; Marlais, Tegwen; Singh, Om Prakash; Mertens, Pascal; Falconar, Andrew K; El-Safi, Sayda; Sundar, Shyam; Miles, Michael A

Impact of Eimeria tenella Coinfection on Campylobacter jejuni Colonization of the Chicken. (2018) Macdonald, Sarah E; van Diemen, Pauline M; Martineau, Henny; Stevens, Mark P; Tomley, Fiona M; Stabler, Richard A; Blake, Damer P

Polyamidoamine Nanoparticles for the Oral Administration of Antimalarial Drugs. (2018) Martí Coma-Cros, Elisabet; Biosca, Arnau; Marques, Joana; Carol, Laura; Urbán, Patricia; Berenguer, Diana; Riera, Maria Cristina; Delves, Michael; Sinden, Robert E; Valle-Delgado, Juan José; Spanos, Lefteris; Siden-Kiamos, Inga; Pérez, Paula; Paaijmans, Krijn; Rottmann, Matthias; Manfredi, Amedea; Ferruti, Paolo; Ranucci, Elisabetta; Fernàndez-Busquets, Xavier

An O-Antigen Glycoconjugate Vaccine Produced Using Protein Glycan Coupling Technology Is Protective in an Inhalational Rat Model of Tularemia. (2018) Marshall, Laura E; Nelson, Michelle; Davies, Carwyn H; Whelan, Adam O; Jenner, Dominic C; Moule, Madeleine G; Denman, Carmen; Cuccui, Jon; Atkins, Timothy P; Wren, Brendan W; Prior, Joann L picture_as_pdf

A multiplex assay for the sensitive detection and quantification of male and female Plasmodium falciparum gametocytes. (2018) Meerstein-Kessel, Lisette; Andolina, Chiara; Carrio, Elvira; Mahamar, Almahamoudou; Sawa, Patrick; Diawara, Halimatou; van de Vegte-Bolmer, Marga; Stone, Will; Collins, Katharine A; Schneider, Petra; Dicko, Alassane; Drakeley, Chris; Felger, Ingrid; Voss, Till; Lanke, Kjerstin; Bousema, Teun

Visceral Leishmaniasis IgG1 Rapid Monitoring of Cure vs. Relapse, and Potential for Diagnosis of Post Kala-Azar Dermal Leishmaniasis. (2018) Marlais, Tegwen; Bhattacharyya, Tapan; Singh, Om Prakash; Mertens, Pascal; Gilleman, Quentin; Thunissen, Caroline; Hinckel, Bruno C Bremer; Pearson, Callum; Gardner, Bathsheba L; Airs, Stephanie; de la Roche, Marianne; Hayes, Kiera; Hafezi, Hannah; Falconar, Andrew K; Eisa, Osama; Saad, Alfarazdeg; Khanal, Basudha; Bhattarai, Narayan Raj; Rijal, Suman; Boelaert, Marleen; El-Safi, Sayda; Sundar, Shyam; Miles, Michael A

Allele-Specific Isothermal Amplification Method Using Unmodified Self-Stabilizing Competitive Primers. (2018) Malpartida-Cardenas, Kenny; Rodriguez-Manzano, Jesus; Yu, Ling-Shan; Delves, Michael J; Nguon, Chea; Chotivanich, Kesinee; Baum, Jake; Georgiou, Pantelis

Mass Drug Administration With Dihydroartemisinin-piperaquine and Malaria Transmission Dynamics in The Gambia: A Prospective Cohort Study. (2018) Mwesigwa, Julia; Achan, Jane; Affara, Muna; Wathuo, Miriam; Worwui, Archibald; Mohammed, Nuredin Ibrahim; Kanuteh, Fatoumatta; Prom, Aurelia; Dierickx, Susan; di Tanna, Gian Luca; Nwakanma, Davis; Bousema, Teun; Drakeley, Chris; Van Geertruyden, Jean Pierre; D'Alessandro, Umberto

Collecting and exploiting data to understand a nation's sexual health needs: Implications for the British National Surveys of Sexual Attitudes and Lifestyles (Natsal). (2018) Mercer, Catherine H; Clifton, Soazig; Prior, Gillian; Aldridge, Robert W; Bonell, Chris; Copas, Andrew J; Field, Nigel; Gibbs, Jo; Macdowall, Wendy; Mitchell, Kirstin R; Tanton, Clare; Thomson, Nick; Unemo, Magnus; Sonnenberg, Pam

New Variant of Multidrug-Resistant Salmonella enterica Serovar Typhimurium Associated with Invasive Disease in Immunocompromised Patients in Vietnam. (2018) Mather, Alison E; Phuong, Tu Le Thi; Gao, Yunfeng; Clare, Simon; Mukhopadhyay, Subhankar; Goulding, David A; Hoang, Nhu Tran Do; Tuyen, Ha Thanh; Lan, Nguyen Phu Huong; Thompson, Corinne N; Trang, Nguyen Hoang Thu; Carrique-Mas, Juan; Tue, Ngo Tri; Campbell, James I; Rabaa, Maia A; Thanh, Duy Pham; Harcourt, Katherine; Hoa, Ngo Thi; Trung, Nguyen Vinh; Schultsz, Constance; Perron, Gabriel G; Coia, John E; Brown, Derek J; Okoro, Chinyere; Parkhill, Julian; Thomson, Nicholas R; Chau, Nguyen Van Vinh; Thwaites, Guy E; Maskell, Duncan J; Dougan, Gordon; Kenney, Linda J; Baker, Stephen

Mitochondrial variation in subpopulations of Anopheles balabacensis Baisas in Sabah, Malaysia (Diptera: Culicidae). (2018) Manin, Benny Obrain; Drakeley, Chris J; Chua, Tock H

In vitro invasion inhibition assay using antibodies against Plasmodium knowlesi Duffy binding protein alpha and apical membrane antigen protein 1 in human erythrocyte-adapted P. knowlesi A1-H.1 strain. (2018) Muh, Fauzi; Lee, Seong-Kyun; Hoque, Mohammad Rafiul; Han, Jin-Hee; Park, Ji-Hoon; Firdaus, Egy Rahman; Moon, Robert W; Lau, Yee Ling; Han, Eun-Taek

Haemolysis and haem oxygenase-1 induction during persistent "asymptomatic" malaria infection in Burkinabé children. (2018) Mooney, Jason P; Barry, Aissata; Gonçalves, Bronner P; Tiono, Alfred B; Awandu, Shehu S; Grignard, Lynn; Drakeley, Chris J; Bottomley, Christian; Bousema, Teun; Riley, Eleanor M

Diversity-Generating Machines: Genetics of Bacterial Sugar-Coating. (2018) Mostowy, Rafał J; Holt, Kathryn E

Development of Trypanosoma cruzi in vitro assays to identify compounds suitable for progression in Chagas' disease drug discovery. (2018) MacLean, Lorna M; Thomas, John; Lewis, Michael D; Cotillo, Ignacio; Gray, David W; De Rycker, Manu

Life-threatening infections in children in Europe (the EUCLIDS Project): a prospective cohort study. (2018) Martinón-Torres, Federico; Salas, Antonio; Rivero-Calle, Irene; Cebey-López, Miriam; Pardo-Seco, Jacobo; Herberg, Jethro A; Boeddha, Navin P; Klobassa, Daniela S; Secka, Fatou; Paulus, Stephane; de Groot, Ronald; Schlapbach, Luregn J; Driessen, Gertjan J; Anderson, Suzanne T; Emonts, Marieke; Zenz, Werner; Carrol, Enitan D; Van der Flier, Michiel; Levin, Michael; EUCLIDS Consortium

Use of whole genome sequencing in surveillance of drug resistant tuberculosis. (2018) McNerney, Ruth; Zignol, Matteo; Clark, Taane G

A novel genetic variant of Streptococcus pneumoniae serotype 11A discovered in Fiji. (2018) Manna, S; Ortika, BD; Dunne, EM; Holt, KE; Kama, M; Russell, FM; Hinds, J; Satzke, C

Isolation of Vaccine-Like Poliovirus Strains in Sewage Samples From the United Kingdom. (2018) Majumdar, Manasi; Klapsa, Dimitra; Wilton, Thomas; Akello, Joyce; Anscombe, Catherine; Allen, David; Mee, Edward T; Minor, Philip D; Martin, Javier

Dengue virus not detected in human semen. (2018) Molton, James S; Low, Isaac; Choy, Milly Ming Ju; Aw, Pauline Poh Kim; Hibberd, Martin L; Tambyah, Paul A; Wilder-Smith, Annelies

Dynamics of cholera epidemics from Benin to Mauritania. (2018) Moore, Sandra; Dongdem, Anthony Zunuo; Opare, David; Cottavoz, Paul; Fookes, Maria; Sadji, Adodo Yao; Dzotsi, Emmanuel; Dogbe, Michael; Jeddi, Fakhri; Bidjada, Bawimodom; Piarroux, Martine; Valentin, Ouyi Tante; Glèlè, Clément Kakaï; Rebaudet, Stanislas; Sow, Amy Gassama; Constantin de Magny, Guillaume; Koivogui, Lamine; Dunoyer, Jessica; Bellet, Francois; Garnotel, Eric; Thomson, Nicholas; Piarroux, Renaud

Genome-Wide Identification by Transposon Insertion Sequencing of Escherichia coli K1 Genes Essential for In Vitro Growth, Gastrointestinal Colonizing Capacity, and Survival in Serum. (2018) McCarthy, Alex J; Stabler, Richard A; Taylor, Peter W

Direct Whole-Genome Sequencing of Cutaneous Strains of Haemophilus ducreyi. (2018) Marks, Michael; Fookes, Maria; Wagner, Josef; Ghinai, Rosanna; Sokana, Oliver; Sarkodie, Yaw-Adu; Solomon, Anthony W; Mabey, David CW; Thomson, Nicholas R

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The effects of prednisolone treatment on serological responses and lipid profiles in Ethiopian leprosy patients with Erythema Nodosum Leprosum reactions. (2018) Negera, Edessa; Tilahun, Melaku; Bobosha, Kidist; Lambert, Saba M; Walker, Stephen L; Spencer, John S; Aseffa, Abraham; Dockrell, Hazel M; Lockwood, Diana N

Complete Genome Sequence of WM99c, an Antibiotic-Resistant Acinetobacter baumannii Global Clone 2 (GC2) Strain Representing an Australian GC2 Lineage. (2018) Nigro, Steven J; Wick, Ryan; Holt, Kathryn E; Hall, Ruth M

Geographical and temporal trends and seasonal relapse in Plasmodium ovale spp. and Plasmodium malariae infections imported to the UK between 1987 and 2015. (2018) Nabarro, Laura EB; Nolder, Debbie; Broderick, Claire; Nadjm, Behzad; Smith, Valerie; Blaze, Marie; Checkley, Anna M; Chiodini, Peter L; Sutherland, Colin J; Whitty, Christopher JM

Hand Grip Strength as a Clinical Biomarker for ME/CFS and Disease Severity. (2018) Nacul, Luis Carlos; Mudie, Kathleen; Kingdon, Caroline C; Clark, Taane G; Lacerda, Eliana Mattos

Molecular assays for antimalarial drug resistance surveillance: A target product profile. (2018) Nsanzabana, Christian; Ariey, Frederic; Beck, Hans-Peter; Ding, Xavier C; Kamau, Edwin; Krishna, Sanjeev; Legrand, Eric; Lucchi, Naomi; Miotto, Olivo; Nag, Sidsel; Noedl, Harald; Roper, Cally; Rosenthal, Philip J; Schallig, Henk DFH; Taylor, Steve M; Volkman, Sarah K; Gonzalez, Iveth J

Human candidate gene polymorphisms and risk of severe malaria in children in Kilifi, Kenya: a case-control association study. (2018) Ndila, Carolyne M; Uyoga, Sophie; Macharia, Alexander W; Nyutu, Gideon; Peshu, Norbert; Ojal, John; Shebe, Mohammed; Awuondo, Kennedy O; Mturi, Neema; Tsofa, Benjamin; Sepúlveda, Nuno; Clark, Taane G; Band, Gavin; Clarke, Geraldine; Rowlands, Kate; Hubbart, Christina; Jeffreys, Anna; Kariuki, Silvia; Marsh, Kevin; Mackinnon, Margaret; Maitland, Kathryn; Kwiatkowski, Dominic P; Rockett, Kirk A; Williams, Thomas N; MalariaGEN Consortium

Complement C1q expression in Erythema nodosum leprosum. (2018) Negera, Edessa; Walker, Stephen L; Lema, Tsehaynesh; Aseffa, Abraham; Lockwood, Diana N; Dockrell, Hazel M

The Effects of Prednisolone Treatment on Cytokine Expression in Patients with Erythema Nodosum Leprosum Reactions. (2018) Negera, Edessa; Walker, Stephen L; Bobosha, Kidist; Bekele, Yonas; Endale, Birtukan; Tarekegn, Azeb; Abebe, Markos; Aseffa, Abraham; Dockrell, Hazel M; Lockwood, Diana N

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Using the human blood index to investigate host biting plasticity: a systematic review and meta-regression of the three major African malaria vectors. (2018) Orsborne, James; Furuya-Kanamori, Luis; Jeffries, Claire L; Kristan, Mojca; Mohammed, Abdul Rahim; Afrane, Yaw A; O'Reilly, Kathleen; Massad, Eduardo; Drakeley, Chris; Walker, Thomas; Yakob, Laith

Human Hookworm Infection Enhances Mycobacterial Growth Inhibition and Associates With Reduced Risk of Tuberculosis Infection. (2018) O'Shea, Matthew K; Fletcher, Thomas E; Muller, Julius; Tanner, Rachel; Matsumiya, Magali; Bailey, J Wendi; Jones, Jayne; Smith, Steven G; Koh, Gavin; Horsnell, William G; Beeching, Nicholas J; Dunbar, James; Wilson, Duncan; Cunningham, Adam F; McShane, Helen

Emerging implications of policies on malaria treatment: genetic changes in the Pfmdr-1 gene affecting susceptibility to artemether-lumefantrine and artesunate-amodiaquine in Africa. (2018) Okell, Lucy C; Reiter, Lisa Malene; Ebbe, Lene Sandø; Baraka, Vito; Bisanzio, Donal; Watson, Oliver J; Bennett, Adam; Verity, Robert; Gething, Peter; Roper, Cally; Alifrangis, Michael

Immunological correlates of mycobacterial growth inhibition describe a spectrum of tuberculosis infection. (2018) O'Shea, Matthew K; Tanner, Rachel; Müller, Julius; Harris, Stephanie A; Wright, Danny; Stockdale, Lisa; Stylianou, Elena; Satti, Iman; Smith, Steven G; Dunbar, James; Fletcher, Thomas E; Dedicoat, Martin; Cunningham, Adam F; McShane, Helen

Optimising genetic transformation of Trypanosoma cruzi using hydroxyurea-induced cell-cycle synchronisation. (2018) Olmo, Francisco; Costa, Fernanda C; Mann, Gurdip Singh; Taylor, Martin C; Kelly, John M

Long read assemblies of geographically dispersed Plasmodium falciparum isolates reveal highly structured subtelomeres. (2018) Otto, Thomas D; Böhme, Ulrike; Sanders, Mandy; Reid, Adam; Bruske, Ellen I; Duffy, Craig W; Bull, Pete C; Pearson, Richard D; Abdi, Abdirahman; Dimonte, Sandra; Stewart, Lindsay B; Campino, Susana; Kekre, Mihir; Hamilton, William L; Claessens, Antoine; Volkman, Sarah K; Ndiaye, Daouda; Amambua-Ngwa, Alfred; Diakite, Mahamadou; Fairhurst, Rick M; Conway, David J; Franck, Matthias; Newbold, Chris I; Berriman, Matt

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The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa. (2018) Park, Se Eun; Pham, Duy Thanh; Boinett, Christine; Wong, Vanessa K; Pak, Gi Deok; Panzner, Ursula; Espinoza, Ligia Maria Cruz; von Kalckreuth, Vera; Im, Justin; Schütt-Gerowitt, Heidi; Crump, John A; Breiman, Robert F; Adu-Sarkodie, Yaw; Owusu-Dabo, Ellis; Rakotozandrindrainy, Raphaël; Soura, Abdramane Bassiahi; Aseffa, Abraham; Gasmelseed, Nagla; Keddy, Karen H; May, Jürgen; Sow, Amy Gassama; Aaby, Peter; Biggs, Holly M; Hertz, Julian T; Montgomery, Joel M; Cosmas, Leonard; Olack, Beatrice; Fields, Barry; Sarpong, Nimako; Razafindrabe, Tsiriniaina Jean Luco; Raminosoa, Tiana Mirana; Kabore, Leon Parfait; Sampo, Emmanuel; Teferi, Mekonnen; Yeshitela, Biruk; El Tayeb, Muna Ahmed; Sooka, Arvinda; Meyer, Christian G; Krumkamp, Ralf; Dekker, Denise Myriam; Jaeger, Anna; Poppert, Sven; Tall, Adama; Niang, Aissatou; Bjerregaard-Andersen, Morten; Løfberg, Sandra Valborg; Seo, Hye Jin; Jeon, Hyon Jin; Deerin, Jessica Fung; Park, Jinkyung; Konings, Frank; Ali, Mohammad; Clemens, John D; Hughes, Peter; Sendagala, Juliet Nsimire; Vudriko, Tobias; Downing, Robert; Ikumapayi, Usman N; Mackenzie, Grant A; Obaro, Stephen; Argimon, Silvia; Aanensen, David M; Page, Andrew; Keane, Jacqueline A; Duchene, Sebastian; Dyson, Zoe; Holt, Kathryn E; Dougan, Gordon; Marks, Florian; Baker, Stephen

Understanding molecular consequences of putative drug resistant mutations in Mycobacterium tuberculosis. (2018) Portelli, Stephanie; Phelan, Jody E; Ascher, David B; Clark, Taane G; Furnham, Nicholas

Influence of Nonpolio Enteroviruses and the Bacterial Gut Microbiota on Oral Poliovirus Vaccine Response: A Study from South India. (2018) Praharaj, Ira; Parker, Edward PK; Giri, Sidhartha; Allen, David J; Silas, Sophia; Revathi, R; Kaliappan, Saravanakumar Puthupalayam; John, Jacob; Prasad, Jasmine Helan; Kampmann, Beate; Iturriza-Gómara, Miren; Grassly, Nicholas C; Kang, Gagandeep

Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates. (2018) Palittapongarnpim, Prasit; Ajawatanawong, Pravech; Viratyosin, Wasna; Smittipat, Nat; Disratthakit, Areeya; Mahasirimongkol, Surakameth; Yanai, Hideki; Yamada, Norio; Nedsuwan, Supalert; Imasanguan, Worarat; Kantipong, Pacharee; Chaiyasirinroje, Boonchai; Wongyai, Jiraporn; Toyo-Oka, Licht; Phelan, Jody; Parkhill, Julian; Clark, Taane G; Hibberd, Martin L; Ruengchai, Wuthiwat; Palittapongarnpim, Panawun; Juthayothin, Tada; Tongsima, Sissades; Tokunaga, Katsushi

The Actinomyosin Motor Drives Malaria Parasite Red Blood Cell Invasion but Not Egress. (2018) Perrin, Abigail J; Collins, Christine R; Russell, Matthew RG; Collinson, Lucy M; Baker, David A; Blackman, Michael J

Para-cresol production by Clostridium difficile affects microbial diversity and membrane integrity of Gram-negative bacteria. (2018) Passmore, Ian J; Letertre, Marine PM; Preston, Mark D; Bianconi, Irene; Harrison, Mark A; Nasher, Fauzy; Kaur, Harparkash; Hong, Huynh A; Baines, Simon D; Cutting, Simon M; Swann, Jonathan R; Wren, Brendan W; Dawson, Lisa F

Blocking IP3 signal transduction pathways inhibits melatonin-induced Ca2+ signals and impairs P. falciparum development and proliferation in erythrocytes. (2018) Pecenin, Mateus Fila; Borges-Pereira, Lucas; Levano-Garcia, Julio; Budu, Alexandre; Alves, Eduardo; Mikoshiba, Katsuhiko; Thomas, Andrew; Garcia, Celia RS

Septins suppress the release of vaccinia virus from infected cells. (2018) Pfanzelter, Julia; Mostowy, Serge; Way, Michael

Inactivation of bpsl1039-1040 ATP-binding cassette transporter reduces intracellular survival in macrophages, biofilm formation and virulence in the murine model of Burkholderia pseudomallei infection. (2018) Pinweha, Peechanika; Pumirat, Pornpan; Cuccui, Jon; Jitprasutwit, Niramol; Muangsombut, Veerachat; Srinon, Varintip; Boonyuen, Usa; Thiennimitr, Parameth; Vattanaviboon, Paiboon; Cia, Felipe; Willcocks, Sam; Bancroft, Gregory J; Wren, Brendan W; Korbsrisate, Sunee

Re-visiting the evolution, dispersal and epidemiology of Zika virus in Asia. (2018) Pettersson, John H-O; Bohlin, Jon; Dupont-Rouzeyrol, Myrielle; Brynildsrud, Ola B; Alfsnes, Kristian; Cao-Lormeau, Van-Mai; Gaunt, Michael W; Falconar, Andrew K; de Lamballerie, Xavier; Eldholm, Vegard; Musso, Didier; Gould, Ernest A

Erratum for Pettersson et al., "How Did Zika Virus Emerge in the Pacific Islands and Latin America?". (2018) Pettersson, John H-O; Eldholm, Vegard; Seligman, Stephen J; Lundkvist, Åke; Falconar, Andrew K; Gaunt, Michael W; Musso, Didier; Nougairède, Antoine; Charrel, Remi; Gould, Ernest A; de Lamballerie, Xavier

Clonal expansion across the seas as seen through CPLP-TB database: A joint effort in cataloguing Mycobacterium tuberculosis genetic diversity in Portuguese-speaking countries. (2018) Perdigão, João; Silva, Carla; Diniz, Jaciara; Pereira, Catarina; Machado, Diana; Ramos, Jorge; Silva, Hugo; Abilleira, Fernanda; Brum, Clarice; Reis, Ana J; Macedo, Maíra; Scaini, João L; Silva, Ana B; Esteves, Leonardo; Macedo, Rita; Maltez, Fernando; Clemente, Sofia; Coelho, Elizabeth; Viegas, Sofia; Rabna, Paulo; Rodrigues, Amabélia; Taveira, Nuno; Jordao, Luísa; Kritski, Afrânio; Lapa E Silva, José R; Mokrousov, Igor; Couvin, David; Rastogi, Nalin; Couto, Isabel; Pain, Arnab; McNerney, Ruth; Clark, Taane G; von Groll, Andrea; Dalla-Costa, Elis R; Rossetti, Maria Lúcia; Silva, Pedro EA; Viveiros, Miguel; Portugal, Isabel

Post-immunization leucocytosis and its implications for the management of febrile infants. (2018) Prentice, Sarah; Kamushaaga, Zephyrian; Nash, Stephen B; Elliott, Alison M; Dockrell, Hazel M; Cose, Stephen

PlasmidTron: assembling the cause of phenotypes and genotypes from NGS data. (2018) Page, Andrew J; Wailan, Alexander; Shao, Yan; Judge, Kim; Dougan, Gordon; Klemm, Elizabeth J; Thomson, Nicholas R; Keane, Jacqueline A

A Microsatellite-Based Analysis of House Infestation With Triatoma Infestans (Hemiptera: Reduviidae) After Insecticide Spraying in the Argentine Chaco. (2018) Piccinali, Romina V; Gaunt, Michael W; Gürtler, Ricardo E

Performance of the TB-LAMP diagnostic assay in reference laboratories: Results from a multicentre study. (2018) Pham, Thu Hang; Peter, Jonathan; Mello, Fernanda CQ; Parraga, Tommy; Lan, Nguyen Thi Ngoc; Nabeta, Pamela; Valli, Eloise; Caceres, Tatiana; Dheda, Keertan; Dorman, Susan E; Hillemann, Doris; Gray, Christen M; Perkins, Mark D

Peptides derived from Plasmodium falciparum leucine-rich repeat 1 bind to serine/threonine phosphatase type 1 and inhibit parasite growth in vitro. (2018) Pierrot, Christine; Zhang, Xiguang; Zanghi, Gigliola; Fréville, Aline; Rebollo, Angelita; Khalife, Jamal

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The S-layer protein of a Clostridium difficile SLCT-11 strain displays a complex glycan required for normal cell growth and morphology. (2018) Richards, Emma; Bouché, Laura; Panico, Maria; Arbeloa, Ana; Vinogradov, Evgeny; Morris, Howard; Wren, Brendan; Logan, Susan M; Dell, Anne; Fairweather, Neil F

Quantification of anti-parasite and anti-disease immunity to malaria as a function of age and exposure. (2018) Rodriguez-Barraquer, Isabel; Arinaitwe, Emmanuel; Jagannathan, Prasanna; Kamya, Moses R; Rosenthal, Phillip J; Rek, John; Dorsey, Grant; Nankabirwa, Joaniter; Staedke, Sarah G; Kilama, Maxwell; Drakeley, Chris; Ssewanyana, Isaac; Smith, David L; Greenhouse, Bryan

Using vaccine Immunostimulation/Immunodynamic modelling methods to inform vaccine dose decision-making. (2018) Rhodes, Sophie J; Guedj, Jeremie; Fletcher, Helen A; Lindenstrøm, Thomas; Scriba, Thomas J; Evans, Thomas G; Knight, Gwenan M; White, Richard G

Intact Cell Lipidomics Reveal Changes to the Ratio of Cardiolipins to Phosphatidylinositols in Response to Kanamycin in HeLa and Primary Cells. (2018) Rebollo-Ramirez, Sonia; Krokowski, Sina; Lobato-Márquez, Damian; Thomson, Michael; Pennisi, Ivana; Mostowy, Serge; Larrouy-Maumus, Gerald

Dissecting the phyloepidemiology of Trypanosoma cruzi I (TcI) in Brazil by the use of high resolution genetic markers. (2018) Roman, Fabiola; das Chagas Xavier, Samanta; Messenger, Louisa A; Pavan, Márcio G; Miles, Michael A; Jansen, Ana María; Yeo, Matthew

Plasmodium-associated changes in human odor attract mosquitoes. (2018) Robinson, Ailie; Busula, Annette O; Voets, Mirjam A; Beshir, Khalid B; Caulfield, John C; Powers, Stephen J; Verhulst, Niels O; Winskill, Peter; Muwanguzi, Julian; Birkett, Michael A; Smallegange, Renate C; Masiga, Daniel K; Mukabana, W Richard; Sauerwein, Robert W; Sutherland, Colin J; Bousema, Teun; Pickett, John A; Takken, Willem; Logan, James G; de Boer, Jetske G

Whole-genome sequencing revealed concurrent outbreaks of shigellosis in the English Orthodox Jewish Community caused by multiple importations of Shigella sonnei from Israel. (2018) Rew, Vanessa; Mook, Piers; Trienekens, Suzan; Baker, Kate S; Dallman, Timothy J; Jenkins, Claire; Crook, Paul D; Thomson, Nicholas R

Multilocus sequence typing: genetic diversity in Trypanosoma cruzi I (TcI) isolates from Brazilian didelphids. (2018) Roman, Fabiola; Iñiguez, Alena M; Yeo, Matthew; Jansen, Ana M

A recombinant conjugated pneumococcal vaccine that protects against murine infections with a similar efficacy to Prevnar-13. (2018) Reglinski, Mark; Ercoli, Giuseppe; Plumptre, Charlie; Kay, Emily; Petersen, Fernanda C; Paton, James C; Wren, Brendan W; Brown, Jeremy S

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HIV, HCMV and mycobacterial antibody levels: a cross-sectional study in a rural Ugandan cohort. (2018) Stockdale, Lisa; Nash, Stephen; Nalwoga, Angela; Gibson, Lorna; Painter, Hannah; Raynes, John; Asiki, Gershim; Newton, Robert; Fletcher, Helen

Induction of Human T-cell and Cytokine Responses Following Vaccination with a Novel Influenza Vaccine. (2018) Skibinski, David AG; Jones, Leigh Ann; Zhu, Yuan O; Xue, Lin Wu; Au, Bijin; Lee, Bernett; Naim, Ahmad Nazri Mohamed; Lee, Audrey; Kaliaperumal, Nivashini; Low, Jenny GH; Lee, Lawrence S; Poidinger, Michael; Saudan, Philippe; Bachmann, Martin; Ooi, Eng Eong; Hanson, Brendon J; Novotny-Diermayr, Veronica; Matter, Alex; Fairhurst, Anna-Marie; Hibberd, Martin L; Connolly, John E

The Interaction of Bluetongue Virus VP6 and Genomic RNA Is Essential for Genome Packaging. (2018) Sung, Po-Yu; Vaughan, Robert; Rahman, Shah Kamranur; Yi, Guanghui; Kerviel, Adeline; Kao, C Cheng; Roy, Polly

The Antimicrobial Effect of a Commercial Mixture of Natural Antimicrobials Against Escherichia coli O157:H7. (2018) Stratakos, Alexandros Ch; Linton, Mark; Ward, Patrick; Campbell, Mairead; Kelly, Carmel; Pinkerton, Laurette; Stef, Lavinia; Pet, Ioan; Stef, Ducu; Iancu, Tiberiu; Theodoridou, Katerina; Gundogdu, Ozan; Corcionivoschi, Nicolae

The Plasmodium LAP complex affects crystalloid biogenesis and oocyst cell division. (2018) Saeed, Sadia; Tremp, Annie Z; Dessens, Johannes T

A Novel Natural Antimicrobial Can Reduce the in vitro and in vivo Pathogenicity of T6SS Positive Campylobacter jejuni and Campylobacter coli Chicken Isolates. (2018) Sima, Filip; Stratakos, Alexandros Ch; Ward, Patrick; Linton, Mark; Kelly, Carmel; Pinkerton, Laurette; Stef, Lavinia; Gundogdu, Ozan; Lazar, Veronica; Corcionivoschi, Nicolae

Disease characteristics and treatment of patients with diabetes mellitus attending government health services in Indonesia, Peru, Romania and South Africa. (2018) Soetedjo, Nanny NM; McAllister, Susan M; Ugarte-Gil, Cesar; Firanescu, Adela G; Ronacher, Katharina; Alisjahbana, Bachti; Costache, Anca L; Zubiate, Carlos; Malherbe, Stephanus T; Koesoemadinata, Raspati C; Laurence, Yoko V; Pearson, Fiona; Kerry-Barnard, Sarah; Ruslami, Rovina; Moore, David AJ; Ioana, Mihai; Kleynhans, Leanie; Permana, Hikmat; Hill, Philip C; Mota, Maria; Walzl, Gerhard; Dockrell, Hazel M; Critchley, Julia A; van Crevel, Reinout; TANDEM Consortium

A Review of the Effect of Management Practices on Campylobacter Prevalence in Poultry Farms. (2018) Sibanda, Nompilo; McKenna, Aaron; Richmond, Anne; Ricke, Steven C; Callaway, Todd; Stratakos, Alexandros Ch; Gundogdu, Ozan; Corcionivoschi, Nicolae

Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. (2018) Sobkowiak, Benjamin; Glynn, Judith R; Houben, Rein MGJ; Mallard, Kim; Phelan, Jody E; Guerra-Assunção, José Afonso; Banda, Louis; Mzembe, Themba; Viveiros, Miguel; McNerney, Ruth; Parkhill, Julian; Crampin, Amelia C; Clark, Taane G

Do hotspots fuel malaria transmission: a village-scale spatio-temporal analysis of a 2-year cohort study in The Gambia. (2018) Stresman, Gillian H; Mwesigwa, Julia; Achan, Jane; Giorgi, Emanuele; Worwui, Archibald; Jawara, Musa; Di Tanna, Gian Luca; Bousema, Teun; Van Geertruyden, Jean-Pierre; Drakeley, Chris; D'Alessandro, Umberto

Low and heterogeneous prevalence of glucose-6-phosphate dehydrogenase deficiency in different settings in Ethiopia using phenotyping and genotyping approaches. (2018) Shitaye, Getasew; Gadisa, Endalamaw; Grignard, Lynn; Shumie, Girma; Chali, Wakweya; Menberu, Temesgen; Belachew, Mulualem; Tegegn, Getaneh; Challi, Sagni; Curry, Jonathan; Mahey, Laleta; Hailu, Tsegaye; Mamo, Hassen; Menon, Menakath; Balcha, Taye; Aseffa, Abraham; Drakeley, Chris; Bousema, Teun; Tadesse, Fitsum G

Genome-Wide Sequence Analysis of Kaposi Sarcoma-Associated Herpesvirus Shows Diversification Driven by Recombination. (2018) Sallah, Neneh; Palser, Anne L; Watson, Simon J; Labo, Nazzarena; Asiki, Gershim; Marshall, Vickie; Newton, Robert; Whitby, Denise; Kellam, Paul; Barroso, Inês

Translational regulation in mycobacteria and its implications for pathogenicity. (2018) Sawyer, Elizabeth B; Grabowska, Anna D; Cortes, Teresa

Impact of nicotine replacement therapy as an adjunct to anti-tuberculosis treatment and behaviour change counselling in newly diagnosed pulmonary tuberculosis patients: an open-label, randomised controlled trial. (2018) Sharma, Surendra Kumar; Mohan, Alladi; Singh, Achintya Dinesh; Mishra, Hridesh; Jhanjee, Sonali; Pandey, Ravindra Mohan; Singh, Binit Kumar; Sharma, Rohini; Pallipamu, Prakash Babu; Pai, Madhukar; Dheda, Keertan

Global analysis of Plasmodium falciparum histidine-rich protein-2 (pfhrp2) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. (2018) Sepúlveda, Nuno; Phelan, Jody; Diez-Benavente, Ernest; Campino, Susana; Clark, Taane G; Hopkins, Heidi; Sutherland, Colin; Drakeley, Chris J; Beshir, Khalid B

Publisher Correction: Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. (2018) Stone, Will JR; Campo, Joseph J; Ouédraogo, André Lin; Meerstein-Kessel, Lisette; Morlais, Isabelle; Da, Dari; Cohuet, Anna; Nsango, Sandrine; Sutherland, Colin J; van de Vegte-Bolmer, Marga; Siebelink-Stoter, Rianne; van Gemert, Geert-Jan; Graumans, Wouter; Lanke, Kjerstin; Shandling, Adam D; Pablo, Jozelyn V; Teng, Andy A; Jones, Sophie; de Jong, Roos M; Fabra-García, Amanda; Bradley, John; Roeffen, Will; Lasonder, Edwin; Gremo, Giuliana; Schwarzer, Evelin; Janse, Chris J; Singh, Susheel K; Theisen, Michael; Felgner, Phil; Marti, Matthias; Drakeley, Chris; Sauerwein, Robert; Bousema, Teun; Jore, Matthijs M

The Chlamydia muridarum plasmid revisited : new insights into growth kinetics. (2018) Skilton, Rachel J; Wang, Yibing; O'Neill, Colette; Filardo, Simone; Marsh, Peter; Bénard, Angèle; Thomson, Nicholas R; Ramsey, Kyle H; Clarke, Ian N

Assessment of community-level effects of intermittent preventive treatment for malaria in schoolchildren in Jinja, Uganda (START-IPT trial): a cluster-randomised trial. (2018) Staedke, Sarah G; Maiteki-Sebuguzi, Catherine; Rehman, Andrea M; Kigozi, Simon P; Gonahasa, Samuel; Okiring, Jaffer; Lindsay, Steve W; Kamya, Moses R; Chandler, Clare IR; Dorsey, Grant; Drakeley, Chris

Estimating the Hospital Burden of Norovirus-Associated Gastroenteritis in England and Its Opportunity Costs for Nonadmitted Patients. (2018) Sandmann, Frank G; Shallcross, Laura; Adams, Natalie; Allen, David J; Coen, Pietro G; Jeanes, Annette; Kozlakidis, Zisis; Larkin, Lesley; Wurie, Fatima; Robotham, Julie V; Jit, Mark; Deeny, Sarah R

Tuberculous meningitis is associated with higher cerebrospinal HIV-1 viral loads compared to other HIV-1-associated meningitides. (2018) Seipone, Ikanyeng D; Singh, Ravesh; Patel, Vinod B; Singh, Avashna; Gordon, Michelle L; Muema, Daniel M; Dheda, Keertan; Ndung'u, Thumbi

Human cytomegalovirus epidemiology and relationship to tuberculosis and cardiovascular disease risk factors in a rural Ugandan cohort. (2018) Stockdale, Lisa; Nash, Stephen; Nalwoga, Angela; Painter, Hannah; Asiki, Gershim; Fletcher, Helen; Newton, Robert

Variation in the quality and out-of-pocket cost of treatment for childhood malaria, diarrhoea, and pneumonia: Community and facility based care in rural Uganda. (2018) Soremekun, Seyi; Kasteng, Frida; Lingam, Raghu; Vassall, Anna; Kertho, Edmound; Settumba, Stella; Etou, Patrick L; Nanyonjo, Agnes; Ten Asbroek, Guus; Kallander, Karin; Kirkwood, Betty; inSCALE Study Group

Bacterial Autophagy: How to Take a Complement. (2018) Sancho-Shimizu, Vanessa; Mostowy, Serge

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Schizont transcriptome variation among clinical isolates and laboratory-adapted clones of the malaria parasite Plasmodium falciparum. (2018) Tarr, Sarah J; Díaz-Ingelmo, Ofelia; Stewart, Lindsay B; Hocking, Suzanne E; Murray, Lee; Duffy, Craig W; Otto, Thomas D; Chappell, Lia; Rayner, Julian C; Awandare, Gordon A; Conway, David J

Molecular typing reveals the co-existence of two transmission cycles of American cutaneous leishmaniasis in the Andean Region of Venezuela with Lutzomyia migonei as the vector. (2018) Torrellas, Annhymariet; Ferrer, Elizabeth; Cruz, Israel; Lima, Héctor de; Delgado, Olinda; Rangel, José Carrero; Bravo, José Arturo; Chicharro, Carmen; Llanes-Acevedo, Ivonne Pamela; Miles, Michael A; Feliciangeli, María Dora

The Injectable Contraceptive Medroxyprogesterone Acetate Attenuates Mycobacterium tuberculosis-Specific Host Immunity Through the Glucocorticoid Receptor. (2018) Tomasicchio, Michele; Davids, Malika; Pooran, Anil; Theron, Grant; Smith, Liezel; Semple, Lynn; Meldau, Richard; Hapgood, Janet Patricia; Dheda, Keertan

Insights into antitrypanosomal drug mode-of-action from cytology-based profiling. (2018) Thomas, James A; Baker, Nicola; Hutchinson, Sebastian; Dominicus, Caia; Trenaman, Anna; Glover, Lucy; Alsford, Sam; Horn, David

Abstract. (2018) Tang, Howard HF; Teo, Shu Mei; Belgrave, Danielle CM; Evans, Michael D; Jackson, Daniel J; Brozynska, Marta; Kusel, Merci MH; Johnston, Sebastian L; Gern, James E; Lemanske, Robert F; Simpson, Angela; Custovic, Adnan; Sly, Peter D; Holt, Patrick G; Holt, Kathryn E; Inouye, Michael

Trajectories of childhood immune development and respiratory health relevant to asthma and allergy. (2018) Tang, Howard Hf; Teo, Shu Mei; Belgrave, Danielle Cm; Evans, Michael D; Jackson, Daniel J; Brozynska, Marta; Kusel, Merci Mh; Johnston, Sebastian L; Gern, James E; Lemanske, Robert F; Simpson, Angela; Custovic, Adnan; Sly, Peter D; Holt, Patrick G; Holt, Kathryn E; Inouye, Michael

Prospective genomic surveillance of methicillin-resistant Staphylococcus aureus (MRSA) associated with bloodstream infection, England, 1 October 2012 to 30 September 2013. (2018) Toleman, Michelle S; Reuter, Sandra; Jamrozy, Dorota; Wilson, Hayley J; Blane, Beth; Harrison, Ewan M; Coll, Francesc; Hope, Russell J; Kearns, Angela; Parkhill, Julian; Peacock, Sharon J; Török, M Estée

Trisubstituted thiazoles as potent and selective inhibitors of Plasmodium falciparum protein kinase G (PfPKG). (2018) Tsagris, Denise J; Birchall, Kristian; Bouloc, Nathalie; Large, Jonathan M; Merritt, Andy; Smiljanic-Hurley, Ela; Wheldon, Mary; Ansell, Keith H; Kettleborough, Catherine; Whalley, David; Stewart, Lindsay B; Bowyer, Paul W; Baker, David A; Osborne, Simon A

Airway Microbiota Dynamics Uncover a Critical Window for Interplay of Pathogenic Bacteria and Allergy in Childhood Respiratory Disease. (2018) Teo, Shu Mei; Tang, Howard HF; Mok, Danny; Judd, Louise M; Watts, Stephen C; Pham, Kym; Holt, Barbara J; Kusel, Merci; Serralha, Michael; Troy, Niamh; Bochkov, Yury A; Grindle, Kristine; Lemanske, Robert F; Johnston, Sebastian L; Gern, James E; Sly, Peter D; Holt, Patrick G; Holt, Kathryn E; Inouye, Michael

Development of (6 R)-2-Nitro-6-[4-(trifluoromethoxy)phenoxy]-6,7-dihydro-5 H-imidazo[2,1- b][1,3]oxazine (DNDI-8219): A New Lead for Visceral Leishmaniasis. (2018) Thompson, Andrew M; O'Connor, Patrick D; Marshall, Andrew J; Blaser, Adrian; Yardley, Vanessa; Maes, Louis; Gupta, Suman; Launay, Delphine; Braillard, Stephanie; Chatelain, Eric; Wan, Baojie; Franzblau, Scott G; Ma, Zhenkun; Cooper, Christopher B; Denny, William A

Zebrafish Infection: From Pathogenesis to Cell Biology. (2018) Torraca, Vincenzo; Mostowy, Serge

Establishment of the nasal microbiota in the first 18 months of life: Correlation with early-onset rhinitis and wheezing. (2018) Ta, Le Duc Huy; Yap, Gaik Chin; Tay, Carina Jing Xuan; Lim, Alicia Shi Min; Huang, Chiung-Hui; Chu, Collins Wenhan; De Sessions, Paola Florez; Shek, Lynette P; Goh, Anne; Van Bever, Hugo PS; Teoh, Oon Hoe; Soh, Jian Yi; Thomas, Biju; Ramamurthy, Mahesh Babu; Goh, Daniel YT; Lay, Christophe; Soh, Shu-E; Chan, Yiong Huak; Saw, Seang-Mei; Kwek, Kenneth; Chong, Yap-Seng; Godfrey, Keith M; Hibberd, Martin Lloyd; Lee, Bee Wah

A protease cascade regulates release of the human malaria parasite Plasmodium falciparum from host red blood cells. (2018) Thomas, James A; Tan, Michele SY; Bisson, Claudine; Borg, Aaron; Umrekar, Trishant R; Hackett, Fiona; Hale, Victoria L; Vizcay-Barrena, Gema; Fleck, Roland A; Snijders, Ambrosius P; Saibil, Helen R; Blackman, Michael J

The Relative Contribution of Symptomatic and Asymptomatic Plasmodium vivax and Plasmodium falciparum Infections to the Infectious Reservoir in a Low-Endemic Setting in Ethiopia. (2018) Tadesse, Fitsum G; Slater, Hannah C; Chali, Wakweya; Teelen, Karina; Lanke, Kjerstin; Belachew, Mulualem; Menberu, Temesgen; Shumie, Girma; Shitaye, Getasew; Okell, Lucy C; Graumans, Wouter; van Gemert, Geert-Jan; Kedir, Soriya; Tesfaye, Addisu; Belachew, Feleke; Abebe, Wake; Mamo, Hassen; Sauerwein, Robert; Balcha, Taye; Aseffa, Abraham; Yewhalaw, Delenasaw; Gadisa, Endalamaw; Drakeley, Chris; Bousema, Teun

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Cobimetinib and trametinib inhibit platelet MEK but do not cause platelet dysfunction. (2018) Unsworth, Amanda J; Bye, Alexander P; Kriek, Neline; Sage, Tanya; Osborne, Ashley A; Donaghy, Dillon; Gibbins, Jonathan M

Exploring the oxidative, antimicrobial and genomic properties of Campylobacter jejuni strains isolated from poultry. (2018) Ugarte-Ruiz, Maria; Domínguez, Lucas; Corcionivoschi, Nicolae; Wren, Brendan W; Dorrell, Nick; Gundogdu, Ozan

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Complement Factor H Levels Associate With Plasmodium falciparum Malaria Susceptibility and Severity. (2018) van Beek, Anna E; Sarr, Isatou; Correa, Simon; Nwakanma, Davis; Brouwer, Mieke C; Wouters, Diana; Secka, Fatou; Anderson, Suzanne TB; Conway, David J; Walther, Michael; Levin, Michael; Kuijpers, Taco W; Cunnington, Aubrey J

Cross-laboratory evaluation of multiplex bead assays including independent common reference standards for immunological monitoring of observational and interventional human studies. (2018) van Meijgaarden, Krista E; Khatri, Bhagwati; Smith, Steven G; Drittij, Anne MFH; de Paus, Roelof A; Goeman, Jelle J; Ho, Mei M; Dockrell, Hazel M; McShane, Helen; Joosten, Simone A; Ottenhoff, Tom HM

Point-of-care diagnostic assay for the detection of Zika virus using the recombinase polymerase amplification method. (2018) Vasileva Wand, Nadina I; Bonney, Laura C; Watson, Robert J; Graham, Victoria; Hewson, Roger

Vibrio cholerae accessory colonisation factor AcfC: a chemotactic protein with a role in hyperinfectivity. (2018) Valiente, Esmeralda; Davies, Cadi; Mills, Dominic C; Getino, Maria; Ritchie, Jennifer M; Wren, Brendan W

Topical Treatment for Cutaneous Leishmaniasis: Dermato-Pharmacokinetic Lead Optimization of Benzoxaboroles. (2018) Van Bocxlaer, Katrien; Gaukel, Eric; Hauser, Deirdre; Park, Seong Hee; Schock, Sara; Yardley, Vanessa; Randolph, Ryan; Plattner, Jacob J; Merchant, Tejal; Croft, Simon L; Jacobs, Robert T; Wring, Stephen A

Progress and challenges in TB vaccine development. (2018) Voss, Gerald; Casimiro, Danilo; Neyrolles, Olivier; Williams, Ann; Kaufmann, Stefan HE; McShane, Helen; Hatherill, Mark; Fletcher, Helen A

Conjunctival transcriptome profiling of Solomon Islanders with active trachoma in the absence of Chlamydia trachomatis infection. (2018) Vasileva, Hristina; Butcher, Robert; Pickering, Harry; Sokana, Oliver; Jack, Kelvin; Solomon, Anthony W; Holland, Martin J; Roberts, Chrissy H

Pharmacodynamics and cellular accumulation of amphotericin B and miltefosine in Leishmania donovani-infected primary macrophages. (2018) Voak, Andrew A; Standing, Joseph F; Sepúlveda, Nuno; Harris, Andy; Croft, Simon L; Seifert, Karin

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Linezolid Pharmacokinetics in South African Patients with Drug-Resistant Tuberculosis and a High Prevalence of HIV Coinfection. (2018) Wasserman, Sean; Denti, Paolo; Brust, James CM; Abdelwahab, Mahmoud; Hlungulu, Siphokazi; Wiesner, Lubbe; Norman, Jennifer; Sirgel, Frederick A; Warren, Robin M; Esmail, Aliasgar; Dheda, Keertan; Gandhi, Neel R; Meintjes, Graeme; Maartens, Gary

Emergence and rapid global dissemination of CTX-M-15-associated Klebsiella pneumoniae strain ST307. (2018) Wyres, Kelly L; Hawkey, Jane; Hetland, Marit AK; Fostervold, Aasmund; Wick, Ryan R; Judd, Louise M; Hamidian, Mohammad; Howden, Benjamin P; Löhr, Iren H; Holt, Kathryn E

Metabolite changes in blood predict the onset of tuberculosis. (2018) Weiner, January; Maertzdorf, Jeroen; Sutherland, Jayne S; Duffy, Fergal J; Thompson, Ethan; Suliman, Sara; McEwen, Gayle; Thiel, Bonnie; Parida, Shreemanta K; Zyla, Joanna; Hanekom, Willem A; Mohney, Robert P; Boom, W Henry; Mayanja-Kizza, Harriet; Howe, Rawleigh; Dockrell, Hazel M; Ottenhoff, Tom HM; Scriba, Thomas J; Zak, Daniel E; Walzl, Gerhard; Kaufmann, Stefan HE; GC6-74 consortium

Comment on: CG258 Klebsiella pneumoniae isolates without β-lactam resistance at the onset of the carbapenem-resistant Enterobacteriaceae epidemic in New York City. (2018) Wyres, Kelly L; Lam, Margaret MC; Holt, Kathryn E

Deepbinner: Demultiplexing barcoded Oxford Nanopore reads with deep convolutional neural networks. (2018) Wick, Ryan R; Judd, Louise M; Holt, Kathryn E

Diagnosis of Kawasaki Disease Using a Minimal Whole-Blood Gene Expression Signature. (2018) Wright, Victoria J; Herberg, Jethro A; Kaforou, Myrsini; Shimizu, Chisato; Eleftherohorinou, Hariklia; Shailes, Hannah; Barendregt, Anouk M; Menikou, Stephanie; Gormley, Stuart; Berk, Maurice; Hoang, Long Truong; Tremoulet, Adriana H; Kanegaye, John T; Coin, Lachlan JM; Glodé, Mary P; Hibberd, Martin; Kuijpers, Taco W; Hoggart, Clive J; Burns, Jane C; Levin, Michael; Immunopathology of Respiratory, Inflammatory and Infectious Dise

Klebsiella pneumoniae as a key trafficker of drug resistance genes from environmental to clinically important bacteria. (2018) Wyres, Kelly L; Holt, Kathryn E

Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of<i>Klebsiella pneumoniae</i>. (2018) Wyres, Kelly L; Wick, Ryan R; Judd, Louise M; Froumine, Roni; Tokolyi, Alex; Gorrie, Claire L; Lam, Margaret MC; Duchêne, Sebastián; Jenney, Adam; Holt, Kathryn E

FastSpar: rapid and scalable correlation estimation for compositional data. (2018) Watts, Stephen C; Ritchie, Scott C; Inouye, Michael; Holt, Kathryn E

Local Skin Inflammation in Cutaneous Leishmaniasis as a Source of Variable Pharmacokinetics and Therapeutic Efficacy of Liposomal Amphotericin B. (2018) Wijnant, Gert-Jan; Van Bocxlaer, Katrien; Fortes Francisco, Amanda; Yardley, Vanessa; Harris, Andy; Alavijeh, Mo; Murdan, Sudaxshina; Croft, Simon L

An inexpensive open source 3D-printed membrane feeder for human malaria transmission studies. (2018) Witmer, Kathrin; Sherrard-Smith, Ellie; Straschil, Ursula; Tunnicliff, Mark; Baum, Jake; Delves, Michael

Demultiplexing barcoded Oxford Nanopore reads with deep convolutional neural networks. (2018) Wick, Ryan R; Judd, Louise M; Holt, Kathryn E

Shigella-Induced Emergency Granulopoiesis Protects Zebrafish Larvae from Secondary Infection. (2018) Willis, Alexandra R; Torraca, Vincenzo; Gomes, Margarida C; Shelley, Jennifer; Mazon-Moya, Maria; Filloux, Alain; Lo Celso, Cristina; Mostowy, Serge

Assessing Plasmodium falciparum transmission in mosquito-feeding assays using quantitative PCR. (2018) Wang, Claire YT; McCarthy, James S; Stone, Will J; Bousema, Teun; Collins, Katharine A; Bialasiewicz, Seweryn

Kaptive Web: User-Friendly Capsule and Lipopolysaccharide Serotype Prediction for Klebsiella Genomes. (2018) Wick, Ryan R; Heinz, Eva; Holt, Kathryn E; Wyres, Kelly L

High-throughput analysis of Yersinia pseudotuberculosis gene essentiality in optimised in vitro conditions, and implications for the speciation of Yersinia pestis. (2018) Willcocks, Samuel J; Stabler, Richard A; Atkins, Helen S; Oyston, Petra F; Wren, Brendan W

<i>Klebsiella pneumoniae</i> as a key trafficker of drug resistance genes from environmental to clinically important bacteria. (2018) Wyres, Kelly L; Holt, Kathryn E

Comparative efficacy, toxicity and biodistribution of the liposomal amphotericin B formulations Fungisome® and AmBisome® in murine cutaneous leishmaniasis. (2018) Wijnant, Gert-Jan; Van Bocxlaer, Katrien; Yardley, Vanessa; Harris, Andy; Alavijeh, Mo; Silva-Pedrosa, Rita; Antunes, Sandra; Mauricio, Isabel; Murdan, Sudaxshina; Croft, Simon L

Plasmodium APC3 mediates chromosome condensation and cytokinesis during atypical mitosis in male gametogenesis. (2018) Wall, Richard J; Ferguson, David JP; Freville, Aline; Franke-Fayard, Blandine; Brady, Declan; Zeeshan, Mohammad; Bottrill, Andrew R; Wheatley, Sally; Fry, Andrew M; Janse, Chris J; Yamano, Hiroyuki; Holder, Anthony A; Guttery, David S; Tewari, Rita

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Structure-activity relationships in a new class of non-substrate-like covalent inhibitors of the bacterial glycosyltransferase LgtC. (2018) Xu, Yong; Cuccui, Jon; Denman, Carmen; Maharjan, Tripty; Wren, Brendan W; Wagner, Gerd K

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Patterns of mutation within an emerging endemic lineage of HEV-3a. (2018) Zhu, Yuan O; Aw, Pauline; Aung, Myo Myint; Lee, Hong Kai; Hibberd, Martin; Lee, Guan Huei

Pan-genome Analysis of Ancient and Modern Salmonella enterica Demonstrates Genomic Stability of the Invasive Para C Lineage for Millennia. (2018) Zhou, Zhemin; Lundstrøm, Inge; Tran-Dien, Alicia; Duchêne, Sebastián; Alikhan, Nabil-Fareed; Sergeant, Martin J; Langridge, Gemma; Fotakis, Anna K; Nair, Satheesh; Stenøien, Hans K; Hamre, Stian S; Casjens, Sherwood; Christophersen, Axel; Quince, Christopher; Thomson, Nicholas R; Weill, François-Xavier; Ho, Simon YW; Gilbert, M Thomas P; Achtman, Mark

High monocyte to lymphocyte ratio is associated with impaired protection after subcutaneous administration of BCG in a mouse model of tuberculosis. (2018) Zelmer, Andrea; Stockdale, Lisa; Prabowo, Satria A; Cia, Felipe; Spink, Natasha; Gibb, Matthew; Eddaoudi, Ayad; Fletcher, Helen A

High monocyte to lymphocyte ratio is associated with impaired protection after subcutaneous administration of BCG in a mouse model of tuberculosis. (2018) Zelmer, Andrea; Stockdale, Lisa; Prabowo, Satria A; Cia, Felipe; Spink, Natasha; Gibb, Matthew; Eddaoudi, Ayad; Fletcher, Helen A