Agoti, Charles N; Ochola-Oyier, Lynette Isabella; Dellicour, Simon; Mohammed, Khadija Said; Lambisia, Arnold W; de Laurent, Zaydah R; Morobe, John M; Mburu, Maureen W; Omuoyo, Donwilliams O; Ongera, Edidah M; +26 more... Ndwiga, Leonard; Maitha, Eric; Kitole, Benson; Suleiman, Thani; Mwakinangu, Mohamed; Nyambu, John K; Otieno, John; Salim, Barke; Musyoki, Jennifer; Murunga, Nickson; Otieno, Edward; Kiiru, John N; Kasera, Kadondi; Amoth, Patrick; Mwangangi, Mercy; Aman, Rashid; Kinyanjui, Samson; Warimwe, George; Phan, My; Agweyu, Ambrose; Cotten, Matthew; Barasa, Edwine; Tsofa, Benjamin; Nokes, D James; Bejon, Philip; Githinji, George; (2022) Transmission networks of SARS-CoV-2 in Coastal Kenya during the first two waves: A retrospective genomic study. eLife, 11. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.71703

Bacigalupo, Sonny A; Chang, Yu-Mei; Dixon, Linda K; Gubbins, Simon; Kucharski, Adam J; Drewe, Julian A; (2022) The importance of fine-scale predictors of wild boar habitat use in an isolated population. Ecology and Evolution, 12 (6). e9031-. ISSN 2045-7758 DOI: https://doi.org/10.1002/ece3.9031

Bell, Sadie; Clarke, Richard M; Ismail, Sharif A; Ojo-Aromokudu, Oyinkansola; Naqvi, Habib; Coghill, Yvonne; Donovan, Helen; Letley, Louise; Paterson, Pauline; Mounier-Jack, Sandra; (2022) COVID-19 vaccination beliefs, attitudes, and behaviours among health and social care workers in the UK: A mixed-methods study. PloS One, 17 (1). e0260949-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0260949

Bwogi, Josephine; Lutalo, Tom; Tushabe, Phionah; Bukenya, Henry; Eliku, James Peter; Ssewanyana, Isaac; Nabadda, Susan; Nsereko, Christopher; Cotten, Matthew; Downing, Robert; +4 more... Lutwama, Julius; Kaleebu, Pontiano; EPI Laboratory team; UVRI -COVID 19 Technical team; (2022) Field evaluation of the performance of seven Antigen Rapid diagnostic tests for the diagnosis of SARs-CoV-2 virus infection in Uganda. PloS one, 17 (5). e0265334-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0265334

Capeding, TPJ; Rosa, JD; Lam, H; Gaviola, DG; Garfin, AMC; Hontiveros, C; Cunnama, L; Laurence, YV; Kitson, N; Vassall, A; +2 more... Sweeney, S; Garcia-Baena, I; (2022) Cost of TB prevention and treatment in the Philippines in 2017. International Journal of Tuberculosis and Lung Disease, 26 (5). pp. 392-398. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.21.0622

Chapman, Lloyd AC; Barnard, Rosanna C; Russell, Timothy W; Abbott, Sam; van Zandvoort, Kevin; Davies, Nicholas G; Kucharski, Adam J; (2022) Unexposed populations and potential COVID-19 hospitalisations and deaths in European countries as per data up to 21 November 2021. Euro surveillance, 27 (1). ISSN 1025-496X DOI: https://doi.org/10.2807/1560-7917.ES.2022.27.1.2101038

Chatterjee, S; Das, P; Vassall, A; (2022) Financial impact of COVID-19 on TB patients in India. International journal of tuberculosis and lung disease, 26 (3). pp. 285-287. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.21.0658

Colton, Hayley; Hodgson, David; Hornsby, Hailey; Brown, Rebecca; Mckenzie, Joanne; Bradley, Kirsty L; James, Cameron; Lindsey, Benjamin B; Birch, Sarah; Marsh, Louise; +14 more... Wood, Steven; Bayley, Martin; Dickson, Gary; James, David C; Nicklin, Martin J; Sayers, Jon R; Zafred, Domen; Rowland-Jones, Sarah L; Kudesia, Goura; Kucharski, Adam; CMMID COVID-19 Working Group; Darton, Thomas C; de Silva, Thushan I; Collini, Paul J; (2022) Risk factors for SARS-CoV-2 seroprevalence following the first pandemic wave in UK healthcare workers in a large NHS Foundation Trust. Wellcome Open Research, 6. 220-. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.17143.3

Darboe, Saffiatou; Bradbury, Richard S; Phelan, Jody; Kanteh, Abdoulie; Muhammad, Abdul-Khalie; Worwui, Archibald; Yang, Shangxin; Nwakanma, Davis; Perez-Sepulveda, Blanca; Kariuki, Samuel; +2 more... Kwambana-Adams, Brenda; Antonio, Martin; (2022) Genomic diversity and antimicrobial resistance among non-typhoidal Salmonella associated with human disease in The Gambia. MICROBIAL GENOMICS, 8 (3). DOI: https://doi.org/10.1099/mgen.0.000785

Diamond, Charlie; Gong, Hui; Sun, Fiona Yueqian; Liu, Yang; Quilty, Billy J; Jit, Mark; Yang, Juan; Yu, Hongjie; Edmunds, W John; Baguelin, Marc; (2022) Regional-based within-year seasonal variations in influenza-related health outcomes across mainland China: a systematic review and spatio-temporal analysis. BMC Medicine, 20 (1). 58-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-022-02269-5

Finch, Emilie; Lowe, Rachel; Fischinger, Stephanie; de St Aubin, Michael; Siddiqui, Sameed M; Dayal, Diana; Loesche, Michael A; Rhee, Justin; Beger, Samuel; Hu, Yiyuan; +9 more... Gluck, Matthew J; Mormann, Benjamin; Hasdianda, Mohammad A; Musk, Elon R; Alter, Galit; Menon, Anil S; Nilles, Eric J; Kucharski, Adam J; CMMID COVID-19 working group and the SpaceX COVID-19 Cohort Coll; (2022) SARS-CoV-2 antibodies protect against reinfection for at least 6 months in a multicentre seroepidemiological workplace cohort. PLoS Biology, 20 (2). e3001531-. ISSN 1544-9173 DOI: https://doi.org/10.1371/journal.pbio.3001531

Fisher, Harriet; Chantler, Tracey; Finn, Adam; Kesten, Joanna; Hickman, Matthew; Letley, Louise; Mounier-Jack, Sandra; Thomas, Clare; Worthington, Katie; Yates, Julie; +1 more... Audrey, Suzanne; (2022) Development of an educational package for the universal human papillomavirus (HPV) vaccination programme: a co-production study with young people and key informants. Research involvement and engagement, 8 (1). 16-. ISSN 2056-7529 DOI: https://doi.org/10.1186/s40900-022-00349-7

Gibson, Amanda J; Stiens, Jennifer; Passmore, Ian J; Faulkner, Valwynne; Miculob, Josephous; Willcocks, Sam; Coad, Michael; Berg, Stefan; Werling, Dirk; Wren, Brendan W; +3 more... Nobeli, Irene; Villarreal-Ramos, Bernardo; Kendall, Sharon L; (2022) Defining the Genes Required for Survival of Mycobacterium bovis in the Bovine Host Offers Novel Insights into the Genetic Basis of Survival of Pathogenic Mycobacteria. mBio, 13 (4). e0067222-. ISSN 2161-2129 DOI: https://doi.org/10.1128/mbio.00672-22

Hamanaka, Tatiana; Ribeiro, Carla Trevisan M; Pone, Sheila; Gomes, Saint Clair; Nielsen-Saines, Karin; Brickley, Elizabeth B; Moreira, Maria Elisabeth; Pone, Marcos; (2022) Longitudinal Follow-Up of Gross Motor Function in Children with Congenital Zika Virus Syndrome from a Cohort in Rio de Janeiro, Brazil. Viruses, 14 (6). p. 1173. ISSN 1999-4915 DOI: https://doi.org/10.3390/v14061173

Kasstan, Ben; Letley, Louise; Mounier-Jack, Sandra; Klynman, Nicole; Gaskell, Katherine M; Eggo, Rosalind M; Marks, Michael; Chantler, Tracey; (2022) Tailoring immunisation programmes in a time of SARS-CoV-2: What can be learnt by comparing the findings of childhood and COVID-19 vaccine evaluation studies in an underserved population? Public health in practice, 4. 100287-. DOI: https://doi.org/10.1016/j.puhip.2022.100287

Kucharski, Adam J; Cohen, Cheryl; (2022) Effective surveillance of variants. Science, 375 (6587). pp. 1349-1350. ISSN 0036-8075 DOI: https://doi.org/10.1126/science.abo4257

Lobkowicz, Ludmila; Miranda-Filho, Demócrito de Barros; Montarroyos, Ulisses Ramos; Martelli, Celina Maria Turchi; Barreto de Araújo, Thalia Velho; De Souza, Wayner Vieira; Bezerra, Luciana Caroline Albuquerque; Dhalia, Rafael; Marques, Ernesto TA; Clemente, Nuria Sanchez; +6 more... Webster, Jayne; Vaughan, Aisling; Webb, Emily L; Brickley, Elizabeth B; Alencar Ximenes, Ricardo Arraes de; Microcephaly Epidemic Research Group; (2022) Co-circulation of Chikungunya Virus during the 2015-2017 Zika Virus Outbreak in Pernambuco, Brazil: An Analysis of the Microcephaly Epidemic Research Group Pregnancy Cohort. The American journal of tropical medicine and hygiene, 106 (6). pp. 1711-1720. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.21-0449

Lubinski, Bailey; Frazier, Laura E; Phan, My VT; Bugembe, Daniel L; Cunningham, Jessie L; Tang, Tiffany; Daniel, Susan; Cotten, Matthew; Jaimes, Javier A; Whittaker, Gary R; (2022) Spike Protein Cleavage-Activation in the Context of the SARS-CoV-2 P681R Mutation: an Analysis from Its First Appearance in Lineage A.23.1 Identified in Uganda. Microbiol Spectrum, 10 (4). e0151422-. DOI: https://doi.org/10.1128/spectrum.01514-22

Manno, Daniela; Ayieko, Philip; Ishola, David; Afolabi, Muhammed O; Rogers, Baimba; Baiden, Frank; Serry-Bangura, Alimamy; Bah, Osman M; Köhn, Brian; Swaray, Ibrahim; +14 more... Owusu-Kyei, Kwabena; Otieno, Godfrey T; Kowuor, Dickens; Tindanbil, Daniel; Smout, Elizabeth; Robinson, Cynthia; Keshinro, Babajide; Foster, Julie; Gallagher, Katherine; Lowe, Brett; Douoguih, Macaya; Leigh, Bailah; Greenwood, Brian; Watson-Jones, Deborah; (2022) Ebola Virus Glycoprotein IgG Seroprevalence in Community Previously Affected by Ebola, Sierra Leone. Emerging Infectious Diseases, 28 (3). pp. 734-738. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2803.211496

Muniz, Lilian F; Maciel, Rebeka JF; Ramos, Danielle S; Albuquerque, Kátia MG; Leão, Ângela C; Van Der Linden, Vanessa; Paixão, Enny S; Brickley, Elizabeth B; Cordeiro, Marli T; Leitão, Gabriella GS; +2 more... Caldas, Silvio S; Leal, Mariana C; (2022) Audiological follow-up of children with congenital Zika syndrome. Heliyon, 8 (1). e08720-. ISSN 2405-8440 DOI: https://doi.org/10.1016/j.heliyon.2022.e08720

Namuwulya, Prossy; Bukenya, Henry; Tushabe, Phionah; Tweyongyere, Robert; Bwogi, Josephine; Cotten, Matthew; Phan, My VT; (2022) Near-Complete Genome Sequences of Measles Virus Strains from 10 Years of Uganda Country-wide Surveillance. Microbiology Resource Announcements, 11 (8). e0060622-. ISSN 2576-098X DOI: https://doi.org/10.1128/mra.00606-22

Nasher, Fauzy; Wren, Brendan W; (2022) Transient internalization of Campylobacter jejuni in Amoebae enhances subsequent invasion of human cells. MICROBIOLOGY, 168 (2). ISSN 1350-0872 DOI: https://doi.org/10.1099/mic.0.001143

Ndlangisa, Kedibone M; du Plessis, Mignon; Lo, Stephanie; de Gouveia, Linda; Chaguza, Chrispin; Antonio, Martin; Kwambana-Adams, Brenda; Cornick, Jennifer; Everett, Dean B; Dagan, Ron; +32 more... Hawkins, Paulina A; Beall, Bernard; Corso, Alejandra; Grassi Almeida, Samanta Cristine; Ochoa, Theresa J; Obaro, Stephen; Shakoor, Sadia; Donkor, Eric S; Gladstone, Rebecca A; Ho, Pak Leung; Paragi, Metka; Doiphode, Sanjay; Srifuengfung, Somporn; Ford, Rebecca; Moïsi, Jennifer; Saha, Samir K; Bigogo, Godfrey; Sigauque, Betuel; Eser, Özgen Köseoglu; Elmdaghri, Naima; Titov, Leonid; Turner, Paul; Kumar, KL Ravi; Kandasamy, Rama; Egorova, Ekaterina; Ip, Margaret; Breiman, Robert F; Klugman, Keith P; McGee, Lesley; Bentley, Stephen D; von Gottberg, Anne; The Global Pneumococcal Sequencing Consortium; (2022) A Streptococcus pneumoniae lineage usually associated with pneumococcal conjugate vaccine (PCV) serotypes is the most common cause of serotype 35B invasive disease in South Africa, following routine use of PCV. Microbial genomics, 8 (4). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000746

Paixao, Enny S; Cardim, Luciana L; Costa, Maria CN; Brickley, Elizabeth B; de Carvalho-Sauer, Rita CO; Carmo, Eduardo H; Andrade, Roberto FS; Rodrigues, Moreno S; Veiga, Rafael V; Costa, Larissa C; +6 more... Moore, Cynthia A; França, Giovanny VA; Smeeth, Liam; Rodrigues, Laura C; Barreto, Mauricio L; Teixeira, Maria G; (2022) Mortality from Congenital Zika Syndrome - Nationwide Cohort Study in Brazil. The New England journal of medicine, 386 (8). pp. 757-767. ISSN 0028-4793 DOI: https://doi.org/10.1056/NEJMoa2101195

Paixao, Enny S; Rodrigues, Laura C; Costa, Maria da Conceição N; de Carvalho-Sauer, Rita de Cassia Oliveira; Oliveira, Wanderson K; Cardim, Luciana L; Schuler-Faccini, Lavinia; Andrade, Roberto FS; Rodrigues, Moreno S; Brickley, Elizabeth B; +6 more... Veiga, Rafael V; Costa, Larissa C; Carmo, Eduardo H; Smeeth, Liam; Barreto, Mauricio L; Teixeira, Maria Gloria; (2022) Population-based surveillance for congenital zika virus syndrome: a latent class analysis of recorded cases from 2015-2018. BMC Pregnancy and Childbirth, 22 (1). 530-. ISSN 1471-2393 DOI: https://doi.org/10.1186/s12884-022-04860-3

Perera, Shehani; Parkhurst, Justin; Diaconu, Karin; Bozzani, Fiammetta; Vassall, Anna; Grant, Alison; Kielmann, Karina; (2022) Complexity and evidence in health sector decision-making: lessons from tuberculosis infection prevention in South Africa. Health Policy and Planning, 37 (9). pp. 1177-1187. ISSN 0268-1080 DOI: https://doi.org/10.1093/heapol/czac059

Phan, My VT; Agoti, Charles N; Munywoki, Patrick K; Otieno, Grieven P; Ngama, Mwanajuma; Kellam, Paul; Cotten, Matthew; Nokes, D James; (2022) Identification of missed viruses by metagenomic sequencing of clinical respiratory samples from Kenya. Scientific reports, 12 (1). 202-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-021-03987-1

Power, Grace M; Vaughan, Aisling M; Qiao, Luxi; Sanchez Clemente, Nuria; Pescarini, Julia M; Paixão, Enny S; Lobkowicz, Ludmila; Raja, Amber I; Portela Souza, André; Barreto, Mauricio Lima; +1 more... Brickley, Elizabeth B; (2022) Socioeconomic risk markers of arthropod-borne virus (arbovirus) infections: a systematic literature review and meta-analysis. BMJ Global Health, 7 (4). e007735-e007735. ISSN 2059-7908 DOI: https://doi.org/10.1136/bmjgh-2021-007735

Pung, Rachael; Firth, Josh A; Spurgin, Lewis G; Singapore CruiseSafe working group; CMMID COVID-19 working group; Lee, Vernon J; Kucharski, Adam J; (2022) Using high-resolution contact networks to evaluate SARS-CoV-2 transmission and control in large-scale multi-day events. Nature Communications, 13 (1). 1956-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-022-29522-y

Raja, Amber I; van Veldhoven, Karin; Ewuzie, Adanna; Frost, Gillian; Sandys, Vince; Atkinson, Barry; Nicholls, Ian; Graham, Alice; Higgins, Hannah; Coldwell, Matthew; +11 more... Simpson, Andrew; Cooke, Joan; Bennett, Allan; Barber, Chris; Morgan, Derek; Atchison, Christina; Keen, Chris; Fletcher, Tony; Pearce, Neil; Brickley, Elizabeth B; Chen, Yiqun; (2022) Investigation of a SARS-CoV-2 Outbreak at an Automotive Manufacturing Site in England. International journal of environmental research and public health, 19 (11). p. 6400. ISSN 1661-7827 DOI: https://doi.org/10.3390/ijerph19116400

Ratnayake, Ruwan; Peyraud, Nicolas; Ciglenecki, Iza; Gignoux, Etienne; Lightowler, Maria; Azman, Andrew S; Gakima, Primitive; Ouamba, Jean Patrick; Sagara, Joseph Amadomon; Ndombe, Rollin; +12 more... Mimbu, Nana; Ascorra, Alexandra; Epicentre and MSF CATI Working Group; Welo, Placide Okitayemba; Mukamba Musenga, Elisabeth; Miwanda, Berthe; Boum, Yap; Checchi, Francesco; Edmunds, W John; Luquero, Francisco; Porten, Klaudia; Finger, Flavio; (2022) Effectiveness of case-area targeted interventions including vaccination on the control of epidemic cholera: protocol for a prospective observational study. BMJ Open, 12 (7). e061206-. ISSN 2044-6055 DOI: https://doi.org/10.1136/bmjopen-2022-061206

Rees, Eleanor M; Lau, Colleen L; Kama, Mike; Reid, Simon; Lowe, Rachel; Kucharski, Adam J; (2022) Estimating the duration of antibody positivity and likely time of Leptospira infection using data from a cross-sectional serological study in Fiji. PLoS neglected tropical diseases, 16 (6). e0010506-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0010506

Robert, Alexis; Kucharski, Adam J; Funk, Sebastian; (2022) The impact of local vaccine coverage and recent incidence on measles transmission in France between 2009 and 2018. BMC Medicine, 20 (1). 77-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-022-02277-5

Rosado, Luiza Emylce Pela; Aquino, Erika Carvalho de; Brickley, Elizabeth Bailey; França, Divania Dias da Silva; Silva, Fluvia Pereira Amorim; Silva, Vinicius Lemes da; Lopes, Angela Ferreira; Turchi, Marilia Dalva; (2022) Socioeconomic disparities associated with symptomatic Zika virus infections in pregnancy and congenital microcephaly: A spatiotemporal analysis from Goiânia, Brazil (2016 to 2020). PLoS Neglected Tropical Diseases, 16 (6). e0010457-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0010457

Rosello, Alicia; Barnard, Rosanna C; Smith, David RM; Evans, Stephanie; Grimm, Fiona; Davies, Nicholas G; Centre for Mathematical Modelling of Infectious Diseases COVID-1; Deeny, Sarah R; Knight, Gwenan M; Edmunds, W John; (2022) Impact of non-pharmaceutical interventions on SARS-CoV-2 outbreaks in English care homes: a modelling study. BMC infectious diseases, 22 (1). 324-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-022-07268-8

Sandmann, Frank G; Tessier, Elise; Lacy, Joanne; Kall, Meaghan; Van Leeuwen, Edwin; Charlett, Andre; Eggo, Rosalind M; Dabrera, Gavin; Edmunds, W John; Ramsay, Mary; +3 more... Campbell, Helen; Amirthalingam, Gayatri; Jit, Mark; (2022) Long-Term Health-Related Quality of Life in Non-Hospitalized Coronavirus Disease 2019 (COVID-19) Cases With Confirmed Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection in England: Longitudinal Analysis and Cross-Sectional Comparison With Controls. Clinical infectious diseases, 75 (1). e962-e973. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciac151

Senghore, Madikay; Chaguza, Chrispin; Bojang, Ebrima; Tientcheu, Peggy-Estelle; Bancroft, Rowan E; Lo, Stephanie W; Gladstone, Rebecca A; McGee, Lesley; Worwui, Archibald; Foster-Nyarko, Ebenezer; +9 more... Ceesay, Fatima; Okoi, Catherine Bi; Klugman, Keith P; Breiman, Robert F; Bentley, Stephen D; Adegbola, Richard; Antonio, Martin; Hanage, William P; Kwambana-Adams, Brenda A; (2022) Widespread sharing of pneumococcal strains in a rural African setting: proximate villages are more likely to share similar strains that are carried at multiple timepoints. Microbial genomics, 8 (2). ISSN 2057-5858 DOI: https://doi.org/10.1099/mgen.0.000732

Skirrow, Helen; Barnett, Sara; Bell, Sadie; Riaposova, Lucia; Mounier-Jack, Sandra; Kampmann, Beate; Holder, Beth; (2022) Women's views on accepting COVID-19 vaccination during and after pregnancy, and for their babies: a multi-methods study in the UK. BMC pregnancy and childbirth, 22 (1). 33-. ISSN 1471-2393 DOI: https://doi.org/10.1186/s12884-021-04321-3

Sumner, T; Jensen, HT; Keogh-Brown, MR; Vassall, A; (2022) Time to integrate epidemiological and economic models for TB. International Journal of Tuberculosis and Lung Disease, 26 (3). pp. 282-284. ISSN 1027-3719 DOI: https://doi.org/10.5588/ijtld.21.0448

Thindwa, Deus; Jambo, Kondwani C; Ojal, John; MacPherson, Peter; Dennis Phiri, Mphatso; Pinsent, Amy; Khundi, McEwen; Chiume, Lingstone; Gallagher, Katherine E; Heyderman, Robert S; +3 more... Corbett, Elizabeth L; French, Neil; Flasche, Stefan; (2022) Social mixing patterns relevant to infectious diseases spread by close contact in urban Blantyre, Malawi. Epidemics, 40. 100590-. ISSN 1755-4365 DOI: https://doi.org/10.1016/j.epidem.2022.100590

Vandenbroucke, Jan P; Brickley, Elizabeth B; Pearce, Neil; Vandenbroucke-Grauls, Christina MJE; (2022) The Evolving Usefulness of the Test-negative Design in Studying Risk Factors for COVID-19. Epidemiology, 33 (2). e7-e8. ISSN 1044-3983 DOI: https://doi.org/10.1097/EDE.0000000000001438

Vassall, Anna; Sweeney, Sedona; Barasa, Edwine; Prinja, Shankar; Keogh-Brown, Marcus R; Tarp Jensen, Henning; Smith, Richard; Baltussen, Rob; M Eggo, Rosalind; Jit, Mark; (2022) Integrating economic and health evidence to inform Covid-19 policy in low- and middle- income countries. Wellcome Open Research, 5. p. 272. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.16380.2

Waites, William; Pearson, Carl AB; Gaskell, Katherine M; House, Thomas; Pellis, Lorenzo; Johnson, Marina; Gould, Victoria; Hunt, Adam; Stone, Neil RH; Kasstan, Ben; +7 more... Chantler, Tracey; Lal, Sham; Roberts, Chrissy H; Goldblatt, David; CMMID COVID-19 Working Group; Marks, Michael; Eggo, Rosalind M; (2022) Transmission dynamics of SARS-CoV-2 in a strictly-Orthodox Jewish community in the UK. Scientific Reports, 12 (1). 8550-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-022-12517-6

Wambua, James; Hermans, Lisa; Coletti, Pietro; Verelst, Frederik; Willem, Lander; Jarvis, Christopher I; Gimma, Amy; Wong, Kerry LM; Lajot, Adrien; Demarest, Stefaan; +4 more... Edmunds, W John; Faes, Christel; Beutels, Philippe; Hens, Niel; (2022) The influence of risk perceptions on close contact frequency during the SARS-CoV-2 pandemic. Scientific Reports, 12 (1). 5192-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-022-09037-8

Waterlow, Naomi R; Toizumi, Michiko; van Leeuwen, Edwin; Thi Nguyen, Hien-Anh; Myint-Yoshida, Lay; Eggo, Rosalind M; Flasche, Stefan; (2022) Evidence for influenza and RSV interaction from 10 years of enhanced surveillance in Nha Trang, Vietnam, a modelling study. PLoS Computational Biology, 18 (6). e1010234-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1010234

Watson-Jones, Deborah; Kavunga-Membo, Hugo; Grais, Rebecca F; Ahuka, Steve; Roberts, Natalie; Edmunds, W John; Choi, Edward M; Roberts, Chrissy H; Edwards, Tansy; Camacho, Anton; +9 more... Lees, Shelley; Leyssen, Maarten; Spiessens, Bart; Luhn, Kerstin; Douoguih, Macaya; Hatchett, Richard; Bausch, Daniel G; Muyembe, Jean-Jacques; DRC-EB-001 protocol writing team; (2022) Protocol for a phase 3 trial to evaluate the effectiveness and safety of a heterologous, two-dose vaccine for Ebola virus disease in the Democratic Republic of the Congo. BMJ open, 12 (3). e055596-. ISSN 2044-6055 DOI: https://doi.org/10.1136/bmjopen-2021-055596

Wilder-Smith, Annelies; Brickley, Elizabeth B; Ximenes, Ricardo Arraes de Alencar; Miranda-Filho, Demócrito de Barros; Turchi Martelli, Celina Maria; Solomon, Tom; Jacobs, Bart C; Pardo, Carlos A; Osorio, Lyda; Parra, Beatriz; +19 more... Lant, Suzannah; Willison, Hugh J; Leonhard, Sonja; Turtle, Lance; Ferreira, Maria Lúcia Brito; de Oliveira Franca, Rafael Freitas; Lambrechts, Louis; Neyts, Johan; Kaptein, Suzanne; Peeling, Rosanna; Boeras, Deborah; Logan, James; Dolk, Helen; Orioli, Ieda M; Neumayr, Andreas; Lang, Trudie; Baker, Bonny; Massad, Eduardo; Preet, Raman; (2022) The legacy of ZikaPLAN: a transnational research consortium addressing Zika. Global Health Action, 14 (sup1). 2008139-. ISSN 1654-9716 DOI: https://doi.org/10.1080/16549716.2021.2008139

Wong, Angel Ys; Tomlinson, Laurie; Brown, Jeremy P; Elson, William; Walker, Alex J; Schultze, Anna; Morton, Caroline E; Evans, David; Inglesby, Peter; MacKenna, Brian; +21 more... Bhaskaran, Krishnan; Rentsch, Christopher T; Powell, Emma; Williamson, Elizabeth; Croker, Richard; Bacon, Seb; Hulme, William; Bates, Chris; Curtis, Helen J; Mehrkar, Amir; Cockburn, Jonathan; McDonald, Helen I; Mathur, Rohini; Wing, Kevin; Forbes, Harriet; Eggo, Rosalind M; Evans, Stephen Jw; Smeeth, Liam; Goldacre, Ben; Douglas, Ian J; (The OpenSAFELY Collaborative); (2022) Association between oral anticoagulants and COVID-19-related outcomes: a population-based cohort study. The British journal of general practice : the journal of the Royal College of General Practitioners, 72 (720). e456-e463. ISSN 0960-1643 DOI: https://doi.org/10.3399/BJGP.2021.0689

Wright, Peter F; Prevost-Reilly, Alejandra C; Natarajan, Harini; Brickley, Elizabeth B; Connor, Ruth I; Wieland-Alter, Wendy F; Miele, Anna S; Weiner, Joshua A; Nerenz, Robert D; Ackerman, Margaret E; (2022) Longitudinal Systemic and Mucosal Immune Responses to SARS-CoV-2 Infection. Journal of infectious diseases, 226 (7). pp. 1204-1214. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiac065