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Andronico, Alessio; Menudier, Luce; Salje, Henrik; Vincent, Muriel; Paireau, Juliette; de Valk, Henriette; Gallian, Pierre; Pastorino, Boris; Brady, Oliver; de Lamballerie, Xavier; +5 more... Lazarus, Clément; Paty, Marie-Claire; Vilain, Pascal; Noel, Harold; Cauchemez, Simon; (2024) Comparing the Performance of Three Models Incorporating Weather Data to Forecast Dengue Epidemics in Reunion Island, 2018-2019. The Journal of infectious diseases, 229 (1). pp. 10-18. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiad468

Antony Oliver, Mary Chriselda; Graham, Matthew; Gass, Katherine M; Medley, Graham F; Clark, Jessica; Davis, Emma L; Reimer, Lisa J; King, Jonathan D; Pouwels, Koen B; Hollingsworth, T Déirdre; (2024) Reducing the Antigen Prevalence Target Threshold for Stopping and Restarting Mass Drug Administration for Lymphatic Filariasis Elimination: A Model-Based Cost-effectiveness Simulation in Tanzania, India and Haiti. Clinical infectious diseases, 78 (Supple). S160-S168. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciae108

Armitage, Edwin P; de Crombrugghe, Gabrielle; Keeley, Alexander J; Senghore, Elina; Camara, Fatoumata E; Jammeh, Musukoi; Bittaye, Amat; Ceesay, Haddy; Ceesay, Isatou; Samateh, Bunja; +9 more... Manneh, Muhammed; Kampmann, Beate; Turner, Claire E; Kucharski, Adam; Botteaux, Anne; Smeesters, Pierre R; de Silva, Thushan I; Marks, Michael; MRCG StrepA Study Group; (2024) Streptococcus pyogenes carriage and infection within households in The Gambia: a longitudinal cohort study. The Lancet. Microbe, 5 (7). pp. 679-688. ISSN 2666-5247 DOI: https://doi.org/10.1016/S2666-5247(24)00046-6

Auzenbergs, Megan; Maure, Clara; Kang, Hyolim; Clark, Andrew; Brady, Oliver; Sahastrabuddhe, Sushant; Abbas, Kaja; (2024) Programmatic considerations and evidence gaps for chikungunya vaccine introduction in countries at risk of chikungunya outbreaks: Stakeholder analysis. PLoS neglected tropical diseases, 18 (4). e0012075-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0012075

Baxter, James; Villabona-Arenas, Ch Julián; Thompson, Robin N; Hué, Stéphane; Regoes, Roland R; Kouyos, Roger D; Günthard, Huldrych F; Albert, Jan; Leigh Brown, Andrew; Atkins, Katherine E; (2024) Reconciling founder variant multiplicity of HIV-1 infection with the rate of CD4+ decline. Journal of the Royal Society, Interface / the Royal Society, 21 (219). 20240255-. ISSN 1742-5689 DOI: https://doi.org/10.1098/rsif.2024.0255

Carlile, Oliver; Briggs, Andrew; Henderson, Alasdair D; Butler-Cole, Ben FC; Tazare, John; Tomlinson, Laurie A; Marks, Michael; Jit, Mark; Lin, Liang-Yu; Bates, Chris; +13 more... Parry, John; Bacon, Sebastian CJ; Dillingham, Iain; Dennison, William A; Costello, Ruth E; Walker, Alex J; Hulme, William; Goldacre, Ben; Mehrkar, Amir; MacKenna, Brian; OpenSAFELY Collaborative; Herrett, Emily; Eggo, Rosalind M; (2024) Impact of long COVID on health-related quality-of-life: an OpenSAFELY population cohort study using patient-reported outcome measures (OpenPROMPT). The Lancet Regional Health - Europe, 40. 100908-. DOI: https://doi.org/10.1016/j.lanepe.2024.100908

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Cirillo, Daniela; Anthony, Richard; Gagneux, Sebastien; Horsburgh, C Robert; Hasan, Rumina; Darboe, Saffiatou; Laniado-Laborin, Rafael; Probandari, Ari; Tukvadze, Nestani; Arcêncio, Ricardo A; +18 more... Bimba, John S; Brighenti, Susanna; Chesov, Dumitru; Chiang, Chen-Yuan; Kalmambetova, Gulmira; Knight, Gwenan; Konstantynovska, Olha; Kruse, Alexandra; Lange, Christoph; Mayanja-Kizza, Harriet; McBryde, Emma; Min, Jinsoo; Sanchez-Montalva, Adrian; Sulis, Giorgia; Tsogt, Bazarragchaa; Van Der Walt, Martie; Yeboah-Manu, Dorothy; Hauser, Janika; (2024) A successful UN High-Level Meeting on antimicrobial resistance must build on the 2023 UN High-Level Meeting on tuberculosis. The Lancet. Global health, 12 (8). e1225-e1226. ISSN 2214-109X DOI: https://doi.org/10.1016/S2214-109X(24)00229-8

Clark, Rebecca A; Portnoy, Allison; Weerasuriya, Chathika K; Sumner, Tom; Bakker, Roel; Harris, Rebecca C; Rade, Kirankumar; Mattoo, Sanjay Kumar; Tumu, Dheeraj; Menzies, Nicolas A; +1 more... White, Richard G; (2024) Estimating the potential health and economic impacts of new tuberculosis vaccines under varying delivery strategies in Delhi and Gujarat, India: a modelling study. The Lancet regional health - Southeast Asia, 31. pp. 1-12. ISSN 2772-3682 DOI: https://doi.org/10.1016/j.lansea.2024.100424

Clark, Rebecca A; Sumner, Tom; Weerasuriya, Chathika K; Bakker, Roel; Scriba, Thomas J; White, Richard G; (2024) Estimating the Potential Public Health Value of BCG Revaccination. The Journal of infectious diseases, 230 (1). e139-e143. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jiae089

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Clarke, J; Lim, A; Gupte, P; Pigott, DM; van Panhuis, WG; Brady, OJ; (2024) A global dataset of publicly available dengue case count data. Scientific Data, 11 (1). 296-. ISSN 2052-4463 DOI: https://doi.org/10.1038/s41597-024-03120-7

Coffeng, Luc E; Graham, Matthew; Browning, Raiha; Kura, Klodeta; Diggle, Peter J; Denwood, Matthew; Medley, Graham F; Anderson, Roy M; de Vlas, Sake J; (2024) Improving the Cost-efficiency of Preventive Chemotherapy: Impact of New Diagnostics on Stopping Decisions for Control of Schistosomiasis. Clinical infectious diseases, 78 (Supple). S153-S159. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciae020

Coussens, Anna K; Zaidi, Syed MA; Allwood, Brian W; Dewan, Puneet K; Gray, Glenda; Kohli, Mikashmi; Kredo, Tamara; Marais, Ben J; Marks, Guy B; Martinez, Leo; +9 more... Ruhwald, Morten; Scriba, Thomas J; Seddon, James A; Tisile, Phumeza; Warner, Digby F; Wilkinson, Robert J; Esmail, Hanif; Houben, Rein MGJ; International Consensus for Early TB (ICE-TB) group; (2024) Classification of early tuberculosis states to guide research for improved care and prevention: an international Delphi consensus exercise. The Lancet Respiratory Medicine, 12 (6). pp. 484-498. ISSN 2213-2600 DOI: https://doi.org/10.1016/S2213-2600(24)00028-6

Douglas, Ian J; Peh, Jerlyn; Mansfield, Kathryn E; Trelfa, Anna; Fowler, Tom; Boulter, Matthew; Cleary, Paul; Smith, Jenifer; Edmunds, W John; (2024) A self-controlled case series study to measure the risk of SARS-CoV-2 infection associated with attendance at sporting and cultural events: the UK Events Research Programme events. BMC medicine, 22 (1). 100-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-024-03276-4

Emes, Eve; Belay, Dagim; Knight, Gwenan M; (2024) The contribution of animal antibiotic use to antibiotic resistance in human infections: Panel evidence from Denmark. One Health, 19. 100856-. ISSN 2352-7714 DOI: https://doi.org/10.1016/j.onehlt.2024.100856

GBD 2021 Forecasting Collaborators; (2024) Burden of disease scenarios for 204 countries and territories, 2022-2050: a forecasting analysis for the Global Burden of Disease Study 2021. Lancet (London, England), 403 (10440). pp. 2204-2256. ISSN 0140-6736 DOI: https://doi.org/10.1016/S0140-6736(24)00685-8

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Jafari, Yalda; Brady, Oliver J; Biggs, Joseph R; Lien, Le Thuy; Mai, Huynh Kim; Nguyen, Hien Anh Thi; Van Loock, Marnix; Herrera-Taracena, Guillermo; Menten, Joris; Iwasaki, Chihiro; +13 more... Takegata, Mizuki; Kitamura, Noriko; Do Thai, Hung; Minh, Bui Xuan; Morita, Kouichi; Anh, Dang Duc; Clifford, Sam; Prem, Kiesha; Hafalla, Julius; Edmunds, W John; Yoshida, Lay Myint; Hibberd, Martin L; Hué, Stéphane; (2024) Could prophylactic antivirals reduce dengue incidence in a high-prevalence endemic area? PLoS neglected tropical diseases, 18 (7). e0012334-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0012334

Judge, Ciara; Vaughan, Timothy; Russell, Timothy; Abbott, Sam; du Plessis, Louis; Stadler, Tanja; Brady, Oliver; Hill, Sarah; (2024) EpiFusion: Joint inference of the effective reproduction number by integrating phylodynamic and epidemiological modelling with particle filtering. PLoS computational biology, 20 (11). e1012528-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1012528

Kang, Hyolim; Auzenbergs, Megan; Clapham, Hannah; Maure, Clara; Kim, Jong-Hoon; Salje, Henrik; Taylor, Christopher G; Lim, Ahyoung; Clark, Andrew; Edmunds, W John; +3 more... Sahastrabuddhe, Sushant; Brady, Oliver J; Abbas, Kaja; (2024) Chikungunya seroprevalence, force of infection, and prevalence of chronic disability after infection in endemic and epidemic settings: a systematic review, meta-analysis, and modelling study. The Lancet Infectious Diseases, 24 (5). pp. 488-503. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(23)00810-1

Khan, Palwasha Y; Govender, Indira; McCreesh, Nicky; Sweeney, Sedona; Sithole, Mareca; Ording-Jespersen, Greg; Buthelezi, Xoli; Houben, Rein MGJ; Baisley, Kathy; Smit, Theresa; +6 more... Wong, Emily B; Hanekom, Willem; White, Richard G; Vassall, Anna; Fielding, Katherine; Grant, Alison D; (2024) Africa Health Research Institute (AHRI) Household Contact study: a study protocol, statistical analysis and modelling plan. Wellcome open research, 9. p. 622. ISSN 2398-502X DOI: https://doi.org/10.12688/wellcomeopenres.22974.1 Item availability may be restricted.

Khurana, Mark P; Curran-Sebastian, Jacob; Bhatt, Samir; Knight, Gwenan M; (2024) Modelling the implementation of narrow versus broader spectrum antibiotics in the empiric treatment of E. coli bacteraemia. Scientific reports, 14 (1). 16986-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-024-66193-9

Krauer, Fabienne; Guenther, Felix; Treskova-Schwarzbach, Marina; Schoenfeld, Viktoria; Koltai, Mihaly; Jit, Mark; Hodgson, David; Schneider, Udo; Wichmann, Ole; Harder, Thomas; +2 more... Sandmann, Frank G; Flasche, Stefan; (2024) Effectiveness and efficiency of immunisation strategies to prevent RSV among infants and older adults in Germany: a modelling study. BMC medicine, 22 (1). 478-. ISSN 1741-7015 DOI: https://doi.org/10.1186/s12916-024-03687-3

Lambach, Philipp; Silal, Sheetal; Sbarra, Alyssa N; Crowcroft, Natasha S; Frey, Kurt; Ferrari, Matt; Vynnycky, Emilia; Metcalf, C Jessica E; Winter, Amy K; Zimmerman, Laura; +12 more... Koh, Mitsuki; Sheel, Meru; Kim, Sun-Young; Munywoki, Patrick K; Portnoy, Allison; Aggarwal, Rakesh; Farooqui, Habib Hasan; Flasche, Stefan; Hogan, Alexandra B; Leung, Kathy; Moss, William J; Wang, Xuan-Yi; (2024) Report from the World Health Organization's immunization and vaccines-related implementation research advisory committee (IVIR-AC) ad hoc meeting, 28 June - 1 July 2024. Vaccine, 42 (26). 126307-. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2024.126307

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Loevinsohn, Gideon; Paulino, Cecilia Then; Spring, Jessica; Hughes, Holly R; Restrepo, Angela Cadavid; Mayfield, Helen; de St Aubin, Michael; Laven, Janeen; Panella, Amanda; Duke, William; +16 more... Etienne, Marie Caroline; Abdalla, Gabriela; Garnier, Salome; Iihoshi, Naomi; Lopez, Beatriz; de la Cruz, Lucia; Henríquez, Bernarda; Baldwin, Margaret; Peña, Farah; Kucharski, Adam J; Vasquez, Marietta; Gutiérrez, Emily Zielinski; Brault, Aaron C; Skewes-Ramm, Ronald; Lau, Colleen L; Nilles, Eric J; (2024) Chikungunya Outbreak Risks after the 2014 Outbreak, Dominican Republic. Emerging infectious diseases, 30 (12). pp. 2679-2683. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid3012.240824

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Marley, Gifty; Dako-Gyeke, Phyllis; Nepal, Prajwol; Rajgopal, Rohini; Koko, Evelyn; Chen, Elizabeth; Nuamah, Kwabena; Osei, Kingsley; Hofkirchner, Hubertus; Marks, Michael; +4 more... Tucker, Joseph D; Eggo, Rosalind; Ampofo, William; Sylvia, Sean; (2024) Collective Intelligence-Based Participatory COVID-19 Surveillance in Accra, Ghana: Pilot Mixed Methods Study. JMIR infodemiology, 4. e50125-. ISSN 2564-1891 DOI: https://doi.org/10.2196/50125

Maure, Clara; Khazhidinov, Kanat; Kang, Hyolim; Auzenbergs, Megan; Moyersoen, Pascaline; Abbas, Kaja; Santos, Gustavo Mendes Lima; Medina, Libia Milena Hernandez; Wartel, T Anh; Kim, Jerome H; +2 more... Clemens, John; Sahastrabuddhe, Sushant; (2024) Chikungunya vaccine development, challenges, and pathway toward public health impact. Vaccine, 42 (26). 126483-. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2024.126483

McQuaid, C Finn; Menzies, Nicolas A; Houben, Rein MGJ; Gomez, Gabriella B; Vassall, Anna; Arinaminpathy, Nimalan; Dodd, Peter J; White, Richard G; (2024) Improving the contribution of mathematical modelling evidence to guidelines and policy: Experiences from tuberculosis. Epidemics, 48 (100786). 100786-. ISSN 1755-4365 DOI: https://doi.org/10.1016/j.epidem.2024.100786

McQuaid, C Finn; Ryckman, Theresa S; Menzies, Nicolas A; White, Richard G; Cohen, Ted; Kendall, Emily A; (2024) Potential of Pan-Tuberculosis Treatment to Drive Emergence of Novel Resistance. Emerging infectious diseases, 30 (8). pp. 1571-1579. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid3008.240541

Minter, Amanda; Medley, Graham F; Hollingsworth, T Déirdre; (2024) Using Passive Surveillance to Maintain Elimination as a Public Health Problem for Neglected Tropical Diseases: A Model-Based Exploration. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 78 (Supple). S169-S174. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciae097

Mogasale, Vijayalaxmi V; Sinha, Anish; John, Jacob; Hasan Farooqui, Habib; Ray, Arindam; Chantler, Tracey; Mogasale, Vittal; Dhoubhadel, Bhim Gopal; Edmunds, W John; Clark, Andrew; +1 more... Abbas, Kaja; (2024) Research priorities to support typhoid conjugate vaccine decision-making in India: evidence assessment and stakeholder survey. BMJ public health, 2 (2). e001089-e001089. ISSN 2753-4294 DOI: https://doi.org/10.1136/bmjph-2024-001089

Mogasale, Vijayalaxmi V; Sinha, Anish; John, Jacob; Hasan Farooqui, Habib; Ray, Arindam; Chantler, Tracey; Mogasale, Vittal; Gopal Dhoubhadel, Bhim; John Edmunds, W; Clark, Andrew; +1 more... Abbas, Kaja; (2024) Typhoid conjugate vaccine implementation in India: A review of supportive evidence. Vaccine: X, 21. 100568-. ISSN 2590-1362 DOI: https://doi.org/10.1016/j.jvacx.2024.100568

Muhsen, Khitam; Waight, Pauline A; Kirsebom, Freja; Andrews, Nick; Letley, Louise; Gower, Charlotte M; Skarnes, Catriona; Quinot, Catherine; Lunt, Rachel; Bernal, Jamie Lopez; +2 more... Flasche, Stefan; Miller, Elizabeth; (2024) Association between COVID-19 Vaccination and SARS-CoV-2 Infection among Household Contacts of Infected Individuals: A Prospective Household Study in England. Vaccines, 12 (2). p. 113. ISSN 2076-393X DOI: https://doi.org/10.3390/vaccines12020113

Munday, James D; Atkins, Katherine E; Klinkenberg, Don; Meurs, Marc; Fleur, Erik; Hahné, Susan Jm; Wallinga, Jacco; Jan van Hoek, Albert; (2024) Estimating the risk and spatial spread of measles in populations with high MMR uptake: Using school-household networks to understand the 2013 to 2014 outbreak in the Netherlands. PLoS medicine, 21 (10). e1004466-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1004466

Nightingale, Emily S; Subramanian, Swaminathan; Schwarzer, Ashley R; Chapman, Lloyd AC; Jambulingam, Purushothaman; Cameron, Mary M; Brady, Oliver J; Medley, Graham F; Lucas, Tim CD; (2024) Inferring the regional distribution of Visceral Leishmaniasis incidence from data at different spatial scales. Communications medicine, 4 (1). 240-. ISSN 2730-664X DOI: https://doi.org/10.1038/s43856-024-00659-9

Nilles, Eric J; Roberts, Kathryn; de St Aubin, Michael; Mayfield, Helen; Restrepo, Angela Cadavid; Garnier, Salome; Abdalla, Gabriela; Etienne, Marie Caroline; Duke, William; Dumas, Devan; +12 more... Jarolim, Petr; Oasan, Timothy; Peña, Farah; Lopez, Beatriz; Cruz, Lucia de la; Sanchez, Isaac Miguel; Murray, Kristy; Baldwin, Margaret; Skewes-Ramm, Ronald; Paulino, Cecilia Then; Lau, Colleen L; Kucharski, Adam; (2024) Convergence of SARS-CoV-2 spike antibody levels to a population immune setpoint. EBioMedicine, 108. 105319-. ISSN 2352-3964 DOI: https://doi.org/10.1016/j.ebiom.2024.105319

Parajulee, Prerana; Lee, Jung-Seok; Abbas, Kaja; Cannon, Jeffrey; Excler, Jean Louis; Kim, Jerome H; Mogasale, Vittal; (2024) State transitions across the Strep A disease spectrum: scoping review and evidence gaps. BMC Infectious Diseases, 24 (1). 108-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-023-08888-4

Pelzer, Puck T; Stuck, Logan; Martinez, Leonardo; Richards, Alexandra S; Acuña-Villaorduña, Carlos; Aronson, Naomi E; Bonnet, Maryline; Carvalho, Anna C; Chan, Pei-Chun; Huang, Li-Min; +32 more... Fang, Chi-Tai; Churchyard, Gavin; Corral-Londoño, Helena Del; Datta, Manjula; Espinal, Marcos A; Fielding, Katherine; Fiore-Gartland, Andrew J; Garcia-Basteiro, Alberto; Hanekom, Willem; Hatherill, Mark; Hill, Phillip C; Huerga, Helena; Jones-López, Edward C; Kritski, Afranio; Mandalakas, Anna M; Mangtani, Punam; Martins Netto, Eduardo; Mayanja, Harriet; Mazahir, Rufaida; Murray, Megan; Rangaka, Molebogeng; Scriba, Thomas; Singh, Jitendra; Singh, Sarman; Stein, Catherine M; Vekemans, Johan; Verhagen, Lilly M; Villalba, Julian A; Wajja, Anne; Watson, Basilea; White, Richard G; Cobelens, Frank GJ; (2024) Effectiveness of the primary Bacillus Calmette-Guérin vaccine against the risk of Mycobacterium tuberculosis infection and tuberculosis disease: a meta-analysis of individual participant data. The Lancet. Microbe, 6 (2). 100961-. ISSN 2666-5247 DOI: https://doi.org/10.1016/j.lanmic.2024.100961

Ratnayake, Ruwan; Knee, Jackie; Cumming, Oliver; Saidi, Jaime Mufitini; Rumedeka, Baron Bashige; Finger, Flavio; Azman, Andrew S; Edmunds, W John; Checchi, Francesco; Gallandat, Karin; (2024) Spatiotemporal Modeling of Cholera, Uvira, Democratic Republic of the Congo, 2016-2020. Emerging infectious diseases, 30 (8). pp. 1677-1682. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid3008.231137

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