Alsford, Sam; Eckert, Sabine; Baker, Nicola; Glover, Lucy; Sanchez-Flores, Alejandro; Leung, Ka Fai; Turner, Daniel J; Field, Mark C; Berriman, Matthew; Horn, David; (2012) High-throughput decoding of antitrypanosomal drug efficacy and resistance. Nature, 482 (7384). pp. 232-236. ISSN 0028-0836 DOI: https://doi.org/10.1038/nature10771

Alsford, Sam; Horn, David; (2012) Cell-cycle-regulated control of VSG expression site silencing by histones and histone chaperones ASF1A and CAF-1b in Trypanosoma brucei. Nucleic acids research, 40 (20). pp. 10150-10160. ISSN 0305-1048 DOI: https://doi.org/10.1093/nar/gks813

Alsford, Sam; duBois, Kelly; Horn, David; Field, Mark C; (2012) Epigenetic mechanisms, nuclear architecture and the control of gene expression in trypanosomes. Expert reviews in molecular medicine, 14. e13-. ISSN 1462-3994 DOI: https://doi.org/10.1017/erm.2012.7 Full text not available from this repository.

Amambua-Ngwa, Alfred; Park, Daniel J; Volkman, Sarah K; Barnes, Kayla G; Bei, Amy K; Lukens, Amanda K; Sene, Papa; Van Tyne, Daria; Ndiaye, Daouda; Wirth, Dyann F; +3 more... Conway, David J; Neafsey, Daniel E; Schaffner, Stephen F; (2012) SNP genotyping identifies new signatures of selection in a deep sample of West African Plasmodium falciparum malaria parasites. Molecular biology and evolution, 29 (11). pp. 3249-3253. ISSN 0737-4038 DOI: https://doi.org/10.1093/molbev/mss151

Amambua-Ngwa, Alfred; Tetteh, Kevin KA; Manske, Magnus; Gomez-Escobar, Natalia; Stewart, Lindsay B; Deerhake, M Elizabeth; Cheeseman, Ian H; Newbold, Christopher I; Holder, Anthony A; Knuepfer, Ellen; +6 more... Janha, Omar; Jallow, Muminatou; Campino, Susana; Macinnis, Bronwyn; Kwiatkowski, Dominic P; Conway, David J; (2012) Population genomic scan for candidate signatures of balancing selection to guide antigen characterization in malaria parasites. PLoS genetics, 8 (11). e1002992-. ISSN 1553-7390 DOI: https://doi.org/10.1371/journal.pgen.1002992

Angrisano, Fiona; Riglar, David T; Sturm, Angelika; Volz, Jennifer C; Delves, Michael J; Zuccala, Elizabeth S; Turnbull, Lynne; Dekiwadia, Chaitali; Olshina, Maya A; Marapana, Danushka S; +11 more... Wong, Wilson; Mollard, Vanessa; Bradin, Clare H; Tonkin, Christopher J; Gunning, Peter W; Ralph, Stuart A; Whitchurch, Cynthia B; Sinden, Robert E; Cowman, Alan F; McFadden, Geoffrey I; Baum, Jake; (2012) Spatial localisation of actin filaments across developmental stages of the malaria parasite. PloS one, 7 (2). e32188-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0032188

Auburn, Sarah; Campino, Susana; Miotto, Olivo; Djimde, Abdoulaye A; Zongo, Issaka; Manske, Magnus; Maslen, Gareth; Mangano, Valentina; Alcock, Daniel; MacInnis, Bronwyn; +5 more... Rockett, Kirk A; Clark, Taane G; Doumbo, Ogobara K; Ouédraogo, Jean Bosco; Kwiatkowski, Dominic P; (2012) Characterization of within-host Plasmodium falciparum diversity using next-generation sequence data. PloS one, 7 (2). e32891-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0032891

Barrett, Michael P; Croft, Simon L; (2012) Management of trypanosomiasis and leishmaniasis. British medical bulletin, 104 (1). pp. 175-196. ISSN 0007-1420 DOI: https://doi.org/10.1093/bmb/lds031

Biagini, Giancarlo A; Fisher, Nicholas; Shone, Alison E; Mubaraki, Murad A; Srivastava, Abhishek; Hill, Alisdair; Antoine, Thomas; Warman, Ashley J; Davies, Jill; Pidathala, Chandrakala; +22 more... Amewu, Richard K; Leung, Suet C; Sharma, Raman; Gibbons, Peter; Hong, David W; Pacorel, Bénédicte; Lawrenson, Alexandre S; Charoensutthivarakul, Sitthivut; Taylor, Lee; Berger, Olivier; Mbekeani, Alison; Stocks, Paul A; Nixon, Gemma L; Chadwick, James; Hemingway, Janet; Delves, Michael J; Sinden, Robert E; Zeeman, Anne-Marie; Kocken, Clemens HM; Berry, Neil G; O'Neill, Paul M; Ward, Stephen A; (2012) Generation of quinolone antimalarials targeting the Plasmodium falciparum mitochondrial respiratory chain for the treatment and prophylaxis of malaria. Proceedings of the National Academy of Sciences of the United States of America, 109 (21). pp. 8298-8303. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1205651109 Full text not available from this repository.

Boité, Mariana C; Mauricio, Isabel L; Miles, Michael A; Cupolillo, Elisa; (2012) New insights on taxonomy, phylogeny and population genetics of Leishmania (Viannia) parasites based on multilocus sequence analysis. PLOS NEGLECTED TROPICAL DISEASES, 6 (11). e1888-. ISSN 1935-2735 DOI: https://doi.org/10.1371/journal.pntd.0001888

Bousema, Teun; Dinglasan, Rhoel R; Morlais, Isabelle; Gouagna, Louis C; van Warmerdam, Travis; Awono-Ambene, Parfait H; Bonnet, Sarah; Diallo, Mouctar; Coulibaly, Mamadou; Tchuinkam, Timoléon; +15 more... Mulder, Bert; Targett, Geoff; Drakeley, Chris; Sutherland, Colin; Robert, Vincent; Doumbo, Ogobara; Touré, Yeya; Graves, Patricia M; Roeffen, Will; Sauerwein, Robert; Birkett, Ashley; Locke, Emily; Morin, Merribeth; Wu, Yimin; Churcher, Thomas S; (2012) Mosquito feeding assays to determine the infectiousness of naturally infected Plasmodium falciparum gametocyte carriers. PloS one, 7 (8). e42821-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0042821

Bousema, Teun; Griffin, Jamie T; Sauerwein, Robert W; Smith, David L; Churcher, Thomas S; Takken, Willem; Ghani, Azra; Drakeley, Chris; Gosling, Roly; (2012) Hitting hotspots: spatial targeting of malaria for control and elimination. PLoS medicine, 9 (1). e1001165-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1001165

Boyce, Mark; Celma, Cristina CP; Roy, Polly; (2012) Bluetongue virus non-structural protein 1 is a positive regulator of viral protein synthesis. Virology journal, 9 (1). 178-. ISSN 1743-422X DOI: https://doi.org/10.1186/1743-422X-9-178

Breunis, Willemijn B; Davila, Sonia; Shimizu, Chisato; Oharaseki, Toshiaki; Takahashi, Kei; van Houdt, Michel; Khor, Chiea Chuen; Wright, Victoria J; Levin, Michael; Burns, Jane C; +4 more... Burgner, David; Hibberd, Martin L; Kuijpers, Taco W; International Kawasaki Disease Genetics Consortium; (2012) Disruption of vascular homeostasis in patients with Kawasaki disease: involvement of vascular endothelial growth factor and angiopoietins. Arthritis and rheumatism, 64 (1). pp. 306-315. ISSN 0004-3591 DOI: https://doi.org/10.1002/art.33316 Full text not available from this repository.

Cairns, Michelle D; Stabler, Richard A; Shetty, Nandini; Wren, Brendan W; (2012) The continually evolving Clostridium difficile species. Future microbiology, 7 (8). pp. 945-957. ISSN 1746-0913 DOI: https://doi.org/10.2217/fmb.12.73 Full text not available from this repository.

Carrasco, Hernán J; Segovia, Maikell; Llewellyn, Martin S; Morocoima, Antonio; Urdaneta-Morales, Servio; Martínez, Cinda; Martínez, Clara E; Garcia, Carlos; Rodríguez, Marlenes; Espinosa, Raul; +7 more... de Noya, Belkisyolé A; Díaz-Bello, Zoraida; Herrera, Leidi; Fitzpatrick, Sinead; Yeo, Matthew; Miles, Michael A; Feliciangeli, M Dora; (2012) Geographical distribution of Trypanosoma cruzi genotypes in Venezuela. PLOS NEGLECTED TROPICAL DISEASES, 6 (6). e1707-. ISSN 1935-2735 DOI: https://doi.org/10.1371/journal.pntd.0001707

Ceesay, Serign J; Bojang, Kalifa A; Nwakanma, Davis; Conway, David J; Koita, Ousmane A; Doumbia, Seydou O; Ndiaye, Daouda; Coulibaly, Tinzana F; Diakité, Mahamadou; Traoré, Sekou F; +29 more... Coulibaly, Mamadou; Ndiaye, Jean-Louis; Sarr, Ousmane; Gaye, Oumar; Konaté, Lassana; Sy, Ngayo; Faye, Babacar; Faye, Ousmane; Sogoba, Nafomon; Jawara, Musa; Dao, Adama; Poudiougou, Belco; Diawara, Sory; Okebe, Joseph; Sangaré, Lansana; Abubakar, Ismaela; Sissako, Aliou; Diarra, Ayouba; Kéita, Moussa; Kandeh, Balla; Long, Carole A; Fairhurst, Rick M; Duraisingh, Manoj; Perry, Robert; Muskavitch, Marc AT; Valim, Clarissa; Volkman, Sarah K; Wirth, Dyann F; Krogstad, Donald J; (2012) Sahel, savana, riverine and urban malaria in West Africa: Similar control policies with different outcomes. Acta tropica, 121 (3). pp. 166-174. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2011.11.005 Full text not available from this repository.

Celik, Nermin; Webb, Chaille T; Leyton, Denisse L; Holt, Kathryn E; Heinz, Eva; Gorrell, Rebecca; Kwok, Terry; Naderer, Thomas; Strugnell, Richard A; Speed, Terence P; +3 more... Teasdale, Rohan D; Likić, Vladimir A; Lithgow, Trevor; (2012) A bioinformatic strategy for the detection, classification and analysis of bacterial autotransporters. PLOS ONE, 7 (8). e43245-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0043245

Churcher, Thomas S; Blagborough, Andrew M; Delves, Michael; Ramakrishnan, Chandra; Kapulu, Melissa C; Williams, Andrew R; Biswas, Sumi; Da, Dari F; Cohuet, Anna; Sinden, Robert E; (2012) Measuring the blockade of malaria transmission--an analysis of the Standard Membrane Feeding Assay. International journal for parasitology, 42 (11). pp. 1037-1044. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2012.09.002 Full text not available from this repository.

Cliff, Jacqueline M; Lee, Ji-Sook; Constantinou, Nicholas; Cho, Jang-Eun; Clark, Taane G; Ronacher, Katharina; King, Elizabeth C; Lukey, Pauline T; Duncan, Ken; Van Helden, Paul D; +2 more... Walzl, Gerhard; Dockrell, Hazel M; (2012) Distinct phases of blood gene expression pattern through tuberculosis treatment reflect modulation of the humoral immune response. The Journal of infectious diseases, 207 (1). pp. 18-29. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jis499 Full text not available from this repository.

Coll, Francesc; Mallard, Kim; Preston, Mark D; Bentley, Stephen; Parkhill, Julian; McNerney, Ruth; Martin, Nigel; Clark, Taane G; (2012) SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences. Bioinformatics (Oxford, England), 28 (22). pp. 2991-2993. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/bts544

Cornes, Belinda K; Khor, Chiea Chuen; Nongpiur, Monisha E; Xu, Liang; Tay, Wan-Ting; Zheng, Yingfeng; Lavanya, Raghavan; Li, Yang; Wu, Renyi; Sim, Xueling; +14 more... Wang, Ya-Xing; Chen, Peng; Teo, Yik Ying; Chia, Kee-Seng; Seielstad, Mark; Liu, Jianjun; Hibberd, Martin L; Cheng, Ching-Yu; Saw, Seang-Mei; Tai, E-Shyong; Jonas, Jost B; Vithana, Eranga N; Wong, Tien Y; Aung, Tin; (2012) Identification of four novel variants that influence central corneal thickness in multi-ethnic Asian populations. Human molecular genetics, 21 (2). pp. 437-445. ISSN 0964-6906 DOI: https://doi.org/10.1093/hmg/ddr463 Full text not available from this repository.

Croft, Simon L; Duparc, Stephan; Arbe-Barnes, Sarah J; Craft, J Carl; Shin, Chang-Sik; Fleckenstein, Lawrence; Borghini-Fuhrer, Isabelle; Rim, Han-Jong; (2012) Review of pyronaridine anti-malarial properties and product characteristics. Malaria journal, 11 (1). 270-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-270

Cruz, Laura Nogueira; Juliano, Maria Aparecida; Budu, Alexandre; Juliano, Luiz; Holder, Anthony A; Blackman, Michael J; Garcia, Célia Rs; (2012) Extracellular ATP triggers proteolysis and cytosolic Ca²⁺ rise in Plasmodium berghei and Plasmodium yoelii malaria parasites. Malaria journal, 11 (1). 69-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-69

Cuccui, Jon; Milne, Timothy S; Harmer, Nicholas; George, Alison J; Harding, Sarah V; Dean, Rachel E; Scott, Andrew E; Sarkar-Tyson, Mitali; Wren, Brendan W; Titball, Richard W; +1 more... Prior, Joann L; (2012) Characterization of the Burkholderia pseudomallei K96243 capsular polysaccharide I coding region. Infection and immunity, 80 (3). pp. 1209-1221. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.05805-11 Full text not available from this repository.

Dawson, Lisa F; Valiente, Esmeralda; Faulds-Pain, Alexandra; Donahue, Elizabeth H; Wren, Brendan W; (2012) Characterisation of Clostridium difficile biofilm formation, a role for Spo0A. PloS one, 7 (12). e50527-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0050527

Deakin, Laura J; Clare, Simon; Fagan, Robert P; Dawson, Lisa F; Pickard, Derek J; West, Michael R; Wren, Brendan W; Fairweather, Neil F; Dougan, Gordon; Lawley, Trevor D; (2012) The Clostridium difficile spo0A gene is a persistence and transmission factor. Infection and immunity, 80 (8). pp. 2704-2711. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00147-12 Full text not available from this repository.

Delves, Michael J; (2012) Plasmodium cell biology should inform strategies used in the development of antimalarial transmission-blocking drugs. Future medicinal chemistry, 4 (18). pp. 2251-2263. ISSN 1756-8919 DOI: https://doi.org/10.4155/fmc.12.182 Full text not available from this repository.

Delves, Michael J; Ramakrishnan, Chandra; Blagborough, Andrew M; Leroy, Didier; Wells, Timothy NC; Sinden, Robert E; (2012) A high-throughput assay for the identification of malarial transmission-blocking drugs and vaccines. International journal for parasitology, 42 (11). pp. 999-1006. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2012.08.009 Full text not available from this repository.

Delves, Michael; Plouffe, David; Scheurer, Christian; Meister, Stephan; Wittlin, Sergio; Winzeler, Elizabeth A; Sinden, Robert E; Leroy, Didier; (2012) The activities of current antimalarial drugs on the life cycle stages of Plasmodium: a comparative study with human and rodent parasites. PLoS medicine, 9 (2). e1001169-. ISSN 1549-1277 DOI: https://doi.org/10.1371/journal.pmed.1001169

Dockrell, Hazel M; (2012) One Health--'joining the dots'. The Onderstepoort journal of veterinary research, 79 (2). 458-. ISSN 0030-2465 DOI: https://doi.org/10.4102/ojvr.v79i2.458

Dockrell, Hazel M; (2012) A new challenge for the tuberculosis vaccine community? The Journal of infectious diseases, 205 (7). pp. 1029-1031. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jis016 Full text not available from this repository.

Dockrell, Hazel M; Smith, Steven G; Lalor, Maeve K; (2012) Variability between countries in cytokine responses to BCG vaccination: what impact might this have on protection? Expert review of vaccines, 11 (2). pp. 121-124. ISSN 1476-0584 DOI: https://doi.org/10.1586/erv.11.186 Full text not available from this repository.

Doig, Kenneth D; Holt, Kathryn E; Fyfe, Janet AM; Lavender, Caroline J; Eddyani, Miriam; Portaels, Françoise; Yeboah-Manu, Dorothy; Pluschke, Gerd; Seemann, Torsten; Stinear, Timothy P; (2012) On the origin of Mycobacterium ulcerans, the causative agent of Buruli ulcer. BMC GENOMICS, 13 (1). 258-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-258

Domènech, Anna; Raynes, John Graham; Rodríguez, Eduardo Graham; Arís, Anna; Bach, Alex; Serrano, Alicia; (2012) Recombinant expression of goat milk serum amyloid A: preliminary studies of the protein and derived peptides on macrophage phagocytosis. Protein and peptide letters, 19 (3). pp. 299-307. ISSN 0929-8665 DOI: https://doi.org/10.2174/092986612799363217 Full text not available from this repository.

Donkor, Eric S; Stabler, Richard A; Hinds, Jason; Adegbola, Richard A; Antonio, Martin; Wren, Brendan W; (2012) Comparative phylogenomics of Streptococcus pneumoniae isolated from invasive disease and nasopharyngeal carriage from West Africans. BMC genomics, 13 (1). 569-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-569

Doumbia, Seydou O; Ndiaye, Daouda; Koita, Ousmane A; Diakité, Mahamadou; Nwakanma, Davis; Coulibaly, Mamadou; Traoré, Sekou F; Keating, Joseph; Milner, Danny A; Ndiaye, Jean-Louis; +43 more... Sene, Papa Diogoye; Ahouidi, Ambroise; Dieye, Tandakha N; Gaye, Oumar; Okebe, Joseph; Ceesay, Serign J; Ngwa, Alfred; Oriero, Eniyou C; Konaté, Lassana; Sy, Ngayo; Jawara, Musa; Faye, Ousmane; Kéita, Moussa; Cissé, Moussa; Sogoba, Nafomon; Poudiougou, Belco; Diawara, Sory; Sangaré, Lansana; Coulibaly, Tinzana; Seck, Ibrahima; Abubakar, Ismaela; Gomis, Jules; Mather, Frances J; Sissako, Aliou; Diarra, Ayouba; Kandeh, Balla; Whalen, Christopher; Moyer, Brian; Nnedu, Obinna; Thiero, Oumar; Bei, Amy K; Daniels, Rachel; Miura, Kazutoyo; Long, Carole A; Fairhurst, Rick M; Duraisingh, Manoj; Muskavitch, Marc AT; D'Alessandro, Umberto; Conway, David J; Volkman, Sarah K; Valim, Clarissa; Wirth, Dyann F; Krogstad, Donald J; (2012) Improving malaria control in West Africa: interruption of transmission as a paradigm shift. Acta tropica, 121 (3). pp. 175-183. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2011.11.009 Full text not available from this repository.

DuBois, Kelly N; Alsford, Sam; Holden, Jennifer M; Buisson, Johanna; Swiderski, Michal; Bart, Jean-Mathieu; Ratushny, Alexander V; Wan, Yakun; Bastin, Philippe; Barry, J David; +5 more... Navarro, Miguel; Horn, David; Aitchison, John D; Rout, Michael P; Field, Mark C; (2012) NUP-1 Is a large coiled-coil nucleoskeletal protein in trypanosomes with lamin-like functions. PLoS biology, 10 (3). e1001287-. ISSN 1544-9173 DOI: https://doi.org/10.1371/journal.pbio.1001287

Dunstan, SJ; Rockett, KA; Quyen, NTN; Teo, YY; Thai, CQ; Hang, NT; Jeffreys, A; Clark, TG; Small, KS; Simmons, CP; +7 more... Day, N; O'Riordan, SE; Kwiatkowski, DP; Farrar, J; Phu, NH; Hien, TT; MalariaGEN Consortium; (2012) Variation in human genes encoding adhesion and proinflammatory molecules are associated with severe malaria in the Vietnamese. Genes and immunity, 13 (6). pp. 503-508. ISSN 1466-4879 DOI: https://doi.org/10.1038/gene.2012.25 Full text not available from this repository.

Dzakpasu, Susie; Soremekun, Seyi; Manu, Alexander; Ten Asbroek, Guus; Tawiah, Charlotte; Hurt, Lisa; Fenty, Justin; Owusu-Agyei, Seth; Hill, Zelee; Campbell, Oona MR; +1 more... Kirkwood, Betty R; (2012) Impact of free delivery care on health facility delivery and insurance coverage in Ghana's Brong Ahafo Region. PloS one, 7 (11). e49430-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0049430

Echeverry, Maria C; Bot, Christopher; Obado, Samson O; Taylor, Martin C; Kelly, John M; (2012) Centromere-associated repeat arrays on Trypanosoma brucei chromosomes are much more extensive than predicted. BMC genomics, 13 (1). 29-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-29

Elmi, Abdi; Watson, Eleanor; Sandu, Pamela; Gundogdu, Ozan; Mills, Dominic C; Inglis, Neil F; Manson, Erin; Imrie, Lisa; Bajaj-Elliott, Mona; Wren, Brendan W; +2 more... Smith, David GE; Dorrell, Nick; (2012) Campylobacter jejuni outer membrane vesicles play an important role in bacterial interactions with human intestinal epithelial cells. Infection and immunity, 80 (12). pp. 4089-4098. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00161-12

Eziefula, Alice C; Gosling, Roly; Hwang, Jimee; Hsiang, Michelle S; Bousema, Teun; von Seidlein, Lorenz; Drakeley, Chris; Primaquine in Africa Discussion Group; (2012) Rationale for short course primaquine in Africa to interrupt malaria transmission. Malaria journal, 11 (1). 360-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-360

Fançony, Cláudia; Gamboa, Dina; Sebastião, Yuri; Hallett, Rachel; Sutherland, Colin; Sousa-Figueiredo, José Carlos; Nery, Susana Vaz; (2012) Various pfcrt and pfmdr1 genotypes of Plasmodium falciparum cocirculate with P. malariae, P. ovale spp., and P. vivax in northern Angola. Antimicrobial agents and chemotherapy, 56 (10). pp. 5271-5277. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.00559-12 Full text not available from this repository.

Field, Mark C; Horn, David; Alsford, Sam; Koreny, Ludek; Rout, Michael P; (2012) Telomeres, tethers and trypanosomes. Nucleus (Austin, Tex), 3 (6). pp. 478-486. ISSN 1949-1034 DOI: https://doi.org/10.4161/nucl.22167

Forsell, J; Granlund, M; Stensvold, CR; Clark, CG; Evengård, B; (2012) Subtype analysis of Blastocystis isolates in Swedish patients. European journal of clinical microbiology & infectious diseases, 31 (7). pp. 1689-1696. ISSN 0934-9723 DOI: https://doi.org/10.1007/s10096-011-1416-6

Franzén, Oscar; Talavera-López, Carlos; Ochaya, Stephen; Butler, Claire E; Messenger, Louisa A; Lewis, Michael D; Llewellyn, Martin S; Marinkelle, Cornelis J; Tyler, Kevin M; Miles, Michael A; +1 more... Andersson, Björn; (2012) Comparative genomic analysis of human infective Trypanosoma cruzi lineages with the bat-restricted subspecies T. cruzi marinkellei. BMC genomics, 13 (1). 531-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-531

Furnham, Nicholas; Sillitoe, Ian; Holliday, Gemma L; Cuff, Alison L; Laskowski, Roman A; Orengo, Christine A; Thornton, Janet M; (2012) Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies. PLoS computational biology, 8 (3). e1002403-. ISSN 1553-734X DOI: https://doi.org/10.1371/journal.pcbi.1002403

Furnham, Nicholas; de Beer, Tjaart AP; Thornton, Janet M; (2012) Current challenges in genome annotation through structural biology and bioinformatics. Current opinion in structural biology, 22 (5). pp. 594-601. ISSN 0959-440X DOI: https://doi.org/10.1016/j.sbi.2012.07.005 Full text not available from this repository.

Geluk, Annemieke; Bobosha, Kidist; van der Ploeg-van Schip, Jolien J; Spencer, John S; Banu, Sayera; Martins, Marcia VSB; Cho, Sang-Nae; Franken, Kees LMC; Kim, Hee Jin; Bekele, Yonas; +7 more... Uddin, Mohammad KM; Hadi, Sheikh Abdul; Aseffa, Abraham; Pessolani, Maria CV; Pereira, Geraldo MB; Dockrell, Hazel M; Ottenhoff, Tom HM; (2012) New biomarkers with relevance to leprosy diagnosis applicable in areas hyperendemic for leprosy. Journal of immunology (Baltimore, Md, 188 (10). pp. 4782-4791. ISSN 0022-1767 DOI: https://doi.org/10.4049/jimmunol.1103452 Full text not available from this repository.

Gemma, Sandra; Giovani, Simone; Brindisi, Margherita; Tripaldi, Pierangela; Brogi, Simone; Savini, Luisa; Fiorini, Isabella; Novellino, Ettore; Butini, Stefania; Campiani, Giuseppe; +2 more... Penzo, Maria; Blackman, Michael J; (2012) Quinolylhydrazones as novel inhibitors of Plasmodium falciparum serine protease PfSUB1. Bioorganic & medicinal chemistry letters, 22 (16). pp. 5317-5321. ISSN 0960-894X DOI: https://doi.org/10.1016/j.bmcl.2012.06.023 Full text not available from this repository.

Ghansah, Anita; Rockett, Kirk A; Clark, Taane G; Wilson, Michael D; Koram, Kwadwo A; Oduro, Abraham R; Amenga-Etego, Lucas; Anyorigiya, Thomas; Hodgson, Abraham; Milligan, Paul; +2 more... Rogers, William O; Kwiatkowski, Dominic P; (2012) Haplotype analyses of haemoglobin C and haemoglobin S and the dynamics of the evolutionary response to malaria in Kassena-Nankana District of Ghana. PloS one, 7 (4). e34565-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0034565

Ghumra, Ashfaq; Semblat, Jean-Philippe; Ataide, Ricardo; Kifude, Carolyne; Adams, Yvonne; Claessens, Antoine; Anong, Damian N; Bull, Peter C; Fennell, Clare; Arman, Monica; +7 more... Amambua-Ngwa, Alfred; Walther, Michael; Conway, David J; Kassambara, Lalla; Doumbo, Ogobara K; Raza, Ahmed; Rowe, J Alexandra; (2012) Induction of strain-transcending antibodies against Group A PfEMP1 surface antigens from virulent malaria parasites. PLoS pathogens, 8 (4). e1002665-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1002665

Gibbings, Derrick; Mostowy, Serge; Jay, Florence; Schwab, Yannick; Cossart, Pascale; Voinnet, Olivier; (2012) Selective autophagy degrades DICER and AGO2 and regulates miRNA activity. NATURE CELL BIOLOGY, 14 (12). pp. 1314-1321. ISSN 1465-7392 DOI: https://doi.org/10.1038/ncb2611

Hafalla, Julius Clemence R; Claser, Carla; Couper, Kevin N; Grau, Georges Emile; Renia, Laurent; de Souza, J Brian; Riley, Eleanor M; (2012) The CTLA-4 and PD-1/PD-L1 inhibitory pathways independently regulate host resistance to Plasmodium-induced acute immune pathology. PLoS pathogens, 8 (2). e1002504-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1002504

Hang'ombe, Bernard M; Nakamura, Ichiro; Samui, Kenny L; Kaile, Davy; Mweene, Aaron S; Kilonzo, Bukheti S; Sawa, Hirofumi; Sugimoto, Chihiro; Wren, Brendan W; (2012) Evidence of Yersinia pestis DNA from fleas in an endemic plague area of Zambia. BMC research notes, 5 (1). 72-. ISSN 1756-0500 DOI: https://doi.org/10.1186/1756-0500-5-72

Hang’ombe, Bernard M; Nakamura, I; Kaile, D; Mweene, AS; Samui, KL; Kilonzo, BS; Sawa, H; Sugimoto, C; Wren, B; (2012) Identification of the plague reservoir in an endemic area of Zambia. The Onderstepoort journal of veterinary research, 79 (2). E1-. ISSN 0030-2465 DOI: https://doi.org/10.4102/ojvr.v79i2.464

Harris, Simon R; Clarke, Ian N; Seth-Smith, Helena MB; Solomon, Anthony W; Cutcliffe, Lesley T; Marsh, Peter; Skilton, Rachel J; Holland, Martin J; Mabey, David; Peeling, Rosanna W; +14 more... Lewis, David A; Spratt, Brian G; Unemo, Magnus; Persson, Kenneth; Bjartling, Carina; Brunham, Robert; de Vries, Henry JC; Morré, Servaas A; Speksnijder, Arjen; Bébéar, Cécile M; Clerc, Maïté; de Barbeyrac, Bertille; Parkhill, Julian; Thomson, Nicholas R; (2012) Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing. Nature genetics, 44 (4). 413-S1. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.2214

He, Miao; Miyajima, Fabio; Roberts, Paul; Ellison, Louise; Pickard, Derek J; Martin, Melissa J; Connor, Thomas R; Harris, Simon R; Fairley, Derek; Bamford, Kathleen B; +25 more... D'Arc, Stephanie; Brazier, Jon; Brown, Derek; Coia, John E; Douce, Gill; Gerding, Dale; Kim, Hee Jung; Koh, Tse Hsien; Kato, Haru; Senoh, Mitsutoshi; Louie, Tom; Michell, Stephen; Butt, Emma; Peacock, Sharon J; Brown, Nick M; Riley, Tom; Songer, Glen; Wilcox, Mark; Pirmohamed, Munir; Kuijper, Ed; Hawkey, Peter; Wren, Brendan W; Dougan, Gordon; Parkhill, Julian; Lawley, Trevor D; (2012) Emergence and global spread of epidemic healthcare-associated Clostridium difficile. Nature genetics, 45 (1). pp. 109-113. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.2478

Healy, Jackie; Wong, Kang; Sawyer, Elizabeth B; Roux, Clement; Domigan, Laura; Gras, Sally L; Sunde, Margaret; Larsen, Nigel G; Gerrard, Juliet; Vasudevamurthy, Madhusudan; (2012) Polymorphism and higher order structures of protein nanofibers from crude mixtures of fish lens crystallins: toward useful materials. Biopolymers, 97 (8). pp. 595-606. ISSN 0006-3525 DOI: https://doi.org/10.1002/bip.22045 Full text not available from this repository.

Hennebry, Sarah C; Sait, Leanne C; Mantena, Raju; Humphrey, Thomas J; Yang, Ji; Scott, Timothy; Kupz, Andreas; Richardson, Samantha J; Strugnell, Richard A; (2012) Salmonella typhimurium's transthyretin-like protein is a host-specific factor important in fecal survival in chickens. PloS one, 7 (12). e46675-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0046675

Hoeijmakers, Wieteke AM; Flueck, Christian; Françoijs, Kees-Jan; Smits, Arne H; Wetzel, Johanna; Volz, Jennifer C; Cowman, Alan F; Voss, Till; Stunnenberg, Hendrik G; Bártfai, Richárd; (2012) Plasmodium falciparum centromeres display a unique epigenetic makeup and cluster prior to and during schizogony. Cellular microbiology, 14 (9). pp. 1391-1401. ISSN 1462-5814 DOI: https://doi.org/10.1111/j.1462-5822.2012.01803.x Full text not available from this repository.

Holt, Kathryn E; Baker, Stephen; Weill, François-Xavier; Holmes, Edward C; Kitchen, Andrew; Yu, Jun; Sangal, Vartul; Brown, Derek J; Coia, John E; Kim, Dong Wook; +8 more... Choi, Seon Young; Kim, Su Hee; da Silveira, Wanderley D; Pickard, Derek J; Farrar, Jeremy J; Parkhill, Julian; Dougan, Gordon; Thomson, Nicholas R; (2012) Shigella sonnei genome sequencing and phylogenetic analysis indicate recent global dissemination from Europe. Nature genetics, 44 (9). pp. 1056-1059. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.2369

Hopp, Christine S; Bowyer, Paul W; Baker, David A; (2012) The role of cGMP signalling in regulating life cycle progression of Plasmodium. Microbes and infection / Institut Pasteur, 14 (10). pp. 831-837. ISSN 1286-4579 DOI: https://doi.org/10.1016/j.micinf.2012.04.011

Hopp, Christine S; Flueck, Christian; Solyakov, Lev; Tobin, Andrew; Baker, David A; (2012) Spatiotemporal and functional characterisation of the Plasmodium falciparum cGMP-dependent protein kinase. PloS one, 7 (11). e48206-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0048206

Horowitz, Amir; Hafalla, Julius CR; King, Elizabeth; Lusingu, John; Dekker, Denise; Leach, Amanda; Moris, Philippe; Cohen, Joe; Vekemans, Johan; Villafana, Tonya; +5 more... Corran, Patrick H; Bejon, Philip; Drakeley, Chris J; von Seidlein, Lorenz; Riley, Eleanor M; (2012) Antigen-specific IL-2 secretion correlates with NK cell responses after immunization of Tanzanian children with the RTS,S/AS01 malaria vaccine. Journal of immunology (Baltimore, Md, 188 (10). pp. 5054-5062. ISSN 0022-1767 DOI: https://doi.org/10.4049/jimmunol.1102710 Full text not available from this repository.

Hsiang, Michelle S; Hwang, Jimee; Kunene, Simon; Drakeley, Chris; Kandula, Deepika; Novotny, Joseph; Parizo, Justin; Jensen, Trevor; Tong, Marcus; Kemere, Jordan; +7 more... Dlamini, Sabelo; Moonen, Bruno; Angov, Evelina; Dutta, Sheetij; Ockenhouse, Christian; Dorsey, Grant; Greenhouse, Bryan; (2012) Surveillance for malaria elimination in Swaziland: a national cross-sectional study using pooled PCR and serology. PloS one, 7 (1). e29550-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0029550

Humphrey, Bruce; Thomson, Nicholas R; Thomas, Christopher M; Brooks, Karen; Sanders, Mandy; Delsol, Anne A; Roe, John M; Bennett, Peter M; Enne, Virve I; (2012) Fitness of Escherichia coli strains carrying expressed and partially silent IncN and IncP1 plasmids. BMC MICROBIOLOGY, 12 (1). 53-. ISSN 1471-2180 DOI: https://doi.org/10.1186/1471-2180-12-53

Inouye, Michael; Conway, Thomas C; Zobel, Justin; Holt, Kathryn E; (2012) Short read sequence typing (SRST): multi-locus sequence types from short reads. BMC GENOMICS, 13 (1). 338-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-338

Jallow, Muminatou; Casals-Pascual, Climent; Ackerman, Hans; Walther, Brigitte; Walther, Michael; Pinder, Margaret; Sisay-Joof, Fatou; Usen, Stanley; Jallow, Mariatou; Abubakar, Ismaela; +5 more... Olaosebikan, Rasaq; Jobarteh, Aminata; Conway, David J; Bojang, Kalifa; Kwiatkowski, Dominic; (2012) Clinical features of severe malaria associated with death: a 13-year observational study in the Gambia. PloS one, 7 (9). e45645-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0045645

Jauneikaite, E; Jefferies, JM; Hibberd, ML; Clarke, SC; (2012) Prevalence of Streptococcus pneumoniae serotypes causing invasive and non-invasive disease in South East Asia: a review. Vaccine, 30 (24). pp. 3503-3514. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2012.03.066 Full text not available from this repository.

Jervis, Adrian J; Butler, Jonathan A; Lawson, Andrew J; Langdon, Rebecca; Wren, Brendan W; Linton, Dennis; (2012) Characterization of the structurally diverse N-linked glycans of Campylobacter species. Journal of bacteriology, 194 (9). pp. 2355-2362. ISSN 0021-9193 DOI: https://doi.org/10.1128/JB.00042-12 Full text not available from this repository.

Jones, Sophie; Sutherland, Colin J; Hermsen, Cornelus; Arens, Theo; Teelen, Karina; Hallett, Rachel; Corran, Patrick; van der Vegte-Bolmer, Marga; Sauerwein, Robert; Drakeley, Chris J; +1 more... Bousema, Teun; (2012) Filter paper collection of Plasmodium falciparum mRNA for detecting low-density gametocytes. MALARIA JOURNAL, 11 (1). 266-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-266

Kelly, John M; Taylor, Martin C; Horn, David; Loza, Einars; Kalvinsh, Ivars; Björkling, Fredrik; (2012) Inhibitors of human histone deacetylase with potent activity against the African trypanosome Trypanosoma brucei. Bioorganic & medicinal chemistry letters, 22 (5). pp. 1886-1890. ISSN 0960-894X DOI: https://doi.org/10.1016/j.bmcl.2012.01.072

Khor, Chiea Chuen; Hibberd, Martin L; (2012) Host-pathogen interactions revealed by human genome-wide surveys. Trends in genetics, 28 (5). pp. 233-243. ISSN 0168-9525 DOI: https://doi.org/10.1016/j.tig.2012.02.001 Full text not available from this repository.

Kolaczinski, Kate; Leslie, Toby; Ali, Iftikhar; Durrani, Naeem; Lee, Sue; Barends, Marion; Beshir, Khalid; Ord, Rosalynn; Hallett, Rachel; Rowland, Mark; (2012) Defining Plasmodium falciparum treatment in South West Asia: a randomized trial comparing artesunate or primaquine combined with chloroquine or SP. PloS one, 7 (1). e28957-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0028957

Kröger, Carsten; Dillon, Shane C; Cameron, Andrew DS; Papenfort, Kai; Sivasankaran, Sathesh K; Hokamp, Karsten; Chao, Yanjie; Sittka, Alexandra; Hébrard, Magali; Händler, Kristian; +11 more... Colgan, Aoife; Leekitcharoenphon, Pimlapas; Langridge, Gemma C; Lohan, Amanda J; Loftus, Brendan; Lucchini, Sacha; Ussery, David W; Dorman, Charles J; Thomson, Nicholas R; Vogel, Jörg; Hinton, Jay CD; (2012) The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium. Proceedings of the National Academy of Sciences of the United States of America, 109 (20). E1277-E1286. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1201061109 Full text not available from this repository.

Kudirkienė, Eglė; Cohn, Marianne Thorup; Stabler, Richard A; Strong, Philippa CR; Sernienė, Loreta; Wren, Brendan W; Nielsen, Eva Møller; Malakauskas, Mindaugas; Brøndsted, Lone; (2012) Phenotypic and genotypic characterizations of Campylobacter jejuni isolated from the broiler meat production process. Current microbiology, 65 (4). pp. 398-406. ISSN 0343-8651 DOI: https://doi.org/10.1007/s00284-012-0170-z Full text not available from this repository.

Lau, Ching-in; Outram, Susan V; Saldaña, José Ignacio; Furmanski, Anna L; Dessens, Johannes T; Crompton, Tessa; (2012) Regulation of murine normal and stress-induced erythropoiesis by Desert Hedgehog. Blood, 119 (20). pp. 4741-4751. ISSN 0006-4971 DOI: https://doi.org/10.1182/blood-2011-10-387266 Full text not available from this repository.

Lauthier, Juan J; Tomasini, Nicolás; Barnabé, Christian; Rumi, María M Monje; D'Amato, Anahí M Alberti; Ragone, Paula G; Yeo, Matthew; Lewis, Michael D; Llewellyn, Martin S; Basombrío, Miguel A; +3 more... Miles, Michael A; Tibayrenc, Michel; Diosque, Patricio; (2012) Candidate targets for Multilocus Sequence Typing of Trypanosoma cruzi: validation using parasite stocks from the Chaco Region and a set of reference strains. Infection, genetics and evolution, 12 (2). pp. 350-358. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.12.008 Full text not available from this repository.

Lawley, Trevor D; Clare, Simon; Walker, Alan W; Stares, Mark D; Connor, Thomas R; Raisen, Claire; Goulding, David; Rad, Roland; Schreiber, Fernanda; Brandt, Cordelia; +7 more... Deakin, Laura J; Pickard, Derek J; Duncan, Sylvia H; Flint, Harry J; Clark, Taane G; Parkhill, Julian; Dougan, Gordon; (2012) Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice. PLoS pathogens, 8 (10). e1002995-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1002995

Lee, Hyejon; Dockrell, Hazel M; Kim, Deok Ryun; Floyd, Sian; Oh, Sue Yeon; Lee, Jin Bum; Kim, Hee Jin; (2012) The Current Status of BCG Vaccination in Young Children in South Korea. Tuberculosis and respiratory diseases, 72 (4). pp. 374-380. ISSN 1738-3536 DOI: https://doi.org/10.4046/trd.2012.72.4.374

Lindsay, Steven W; Lindsay, Thomas C; Duprez, Jessica; Hall, Martin JR; Kwambana, Brenda A; Jawara, Musa; Nurudeen, Ikumapayi U; Sallah, Neneh; Wyatt, Nigel; D'Alessandro, Umberto; +2 more... Pinder, Margaret; Antonio, Martin; (2012) Chrysomya putoria, a putative vector of diarrheal diseases. PLoS neglected tropical diseases, 6 (11). e1895-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001895

Loh, Lip Nam; Ward, Theresa H; (2012) Escherichia coli K1 invasion of human brain microvascular endothelial cells. Methods in enzymology, 506. pp. 93-113. ISSN 0076-6879 DOI: https://doi.org/10.1016/B978-0-12-391856-7.00030-5 Full text not available from this repository.

Manjurano, Alphaxard; Clark, Taane G; Nadjm, Behzad; Mtove, George; Wangai, Hannah; Sepulveda, Nuno; Campino, Susana G; Maxwell, Caroline; Olomi, Raimos; Rockett, Kirk R; +5 more... Jeffreys, Anna; MalariaGen Consortium; Riley, Eleanor M; Reyburn, Hugh; Drakeley, Christopher; (2012) Candidate human genetic polymorphisms and severe malaria in a Tanzanian population. PloS one, 7 (10). e47463-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0047463

Manske, Magnus; Miotto, Olivo; Campino, Susana; Auburn, Sarah; Almagro-Garcia, Jacob; Maslen, Gareth; O'Brien, Jack; Djimde, Abdoulaye; Doumbo, Ogobara; Zongo, Issaka; +46 more... Ouedraogo, Jean-Bosco; Michon, Pascal; Mueller, Ivo; Siba, Peter; Nzila, Alexis; Borrmann, Steffen; Kiara, Steven M; Marsh, Kevin; Jiang, Hongying; Su, Xin-Zhuan; Amaratunga, Chanaki; Fairhurst, Rick; Socheat, Duong; Nosten, Francois; Imwong, Mallika; White, Nicholas J; Sanders, Mandy; Anastasi, Elisa; Alcock, Dan; Drury, Eleanor; Oyola, Samuel; Quail, Michael A; Turner, Daniel J; Ruano-Rubio, Valentin; Jyothi, Dushyanth; Amenga-Etego, Lucas; Hubbart, Christina; Jeffreys, Anna; Rowlands, Kate; Sutherland, Colin; Roper, Cally; Mangano, Valentina; Modiano, David; Tan, John C; Ferdig, Michael T; Amambua-Ngwa, Alfred; Conway, David J; Takala-Harrison, Shannon; Plowe, Christopher V; Rayner, Julian C; Rockett, Kirk A; Clark, Taane G; Newbold, Chris I; Berriman, Matthew; MacInnis, Bronwyn; Kwiatkowski, Dominic P; (2012) Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing. Nature, 487 (7407). pp. 375-379. ISSN 0028-0836 DOI: https://doi.org/10.1038/nature11174

Mejia, Ana Maria; Hall, Belinda S; Taylor, Martin C; Gómez-Palacio, Andrés; Wilkinson, Shane R; Triana-Chávez, Omar; Kelly, John M; (2012) Benznidazole-resistance in Trypanosoma cruzi is a readily acquired trait that can arise independently in a single population. The Journal of infectious diseases, 206 (2). pp. 220-228. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jis331

Mellata, Melha; Maddux, Jacob T; Nam, Timothy; Thomson, Nicholas; Hauser, Heidi; Stevens, Mark P; Mukhopadhyay, Suman; Sarker, Shameema; Crabbé, Aurélie; Nickerson, Cheryl A; +2 more... Santander, Javier; Curtiss, Roy; (2012) New insights into the bacterial fitness-associated mechanisms revealed by the characterization of large plasmids of an avian pathogenic E. coli. PLOS ONE, 7 (1). e29481-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0029481

Merrick, Catherine J; Huttenhower, Curtis; Buckee, Caroline; Amambua-Ngwa, Alfred; Gomez-Escobar, Natalia; Walther, Michael; Conway, David J; Duraisingh, Manoj T; (2012) Epigenetic dysregulation of virulence gene expression in severe Plasmodium falciparum malaria. The Journal of infectious diseases, 205 (10). pp. 1593-1600. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jis239 Full text not available from this repository.

Messenger, Louisa A; Llewellyn, Martin S; Bhattacharyya, Tapan; Franzén, Oscar; Lewis, Michael D; Ramírez, Juan David; Carrasco, Hernan J; Andersson, Björn; Miles, Michael A; (2012) Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing. PLoS neglected tropical diseases, 6 (4). e1584-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001584

Mills, Dominic C; Gundogdu, Ozan; Elmi, Abdi; Bajaj-Elliott, Mona; Taylor, Peter W; Wren, Brendan W; Dorrell, Nick; (2012) Increase in Campylobacter jejuni invasion of intestinal epithelial cells under low-oxygen coculture conditions that reflect the in vivo environment. Infection and immunity, 80 (5). pp. 1690-1698. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.06176-11

Mobegi, Victor A; Loua, Kovana M; Ahouidi, Ambroise D; Satoguina, Judith; Nwakanma, Davis C; Amambua-Ngwa, Alfred; Conway, David J; (2012) Population genetic structure of Plasmodium falciparum across a region of diverse endemicity in West Africa. Malaria journal, 11 (1). 223-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-223

Mohamed-Ahmed, Abeer HA; Brocchini, Stephen; Croft, Simon L; (2012) Recent advances in development of amphotericin B formulations for the treatment of visceral leishmaniasis. Current opinion in infectious diseases, 25 (6). pp. 695-702. ISSN 0951-7375 DOI: https://doi.org/10.1097/QCO.0b013e328359eff2 Full text not available from this repository.

Moon, Robert W; Hall, Joanna; Rangkuti, Farania; Ho, Yung Shwen; Almond, Neil; Mitchell, Graham H; Pain, Arnab; Holder, Anthony A; Blackman, Michael J; (2012) Adaptation of the genetically tractable malaria pathogen Plasmodium knowlesi to continuous culture in human erythrocytes. Proceedings of the National Academy of Sciences of the United States of America, 110 (2). pp. 531-536. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1216457110 Full text not available from this repository.

Mwakalinga, Steven B; Wang, Christian W; Bengtsson, Dominique C; Turner, Louise; Dinko, Bismarck; Lusingu, John P; Arnot, David E; Sutherland, Colin J; Theander, Thor G; Lavstsen, Thomas; (2012) Expression of a type B RIFIN in Plasmodium falciparum merozoites and gametes. Malaria journal, 11 (1). 429-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-429

Müller, Claudia M; Conejero, Laura; Spink, Natasha; Wand, Matthew E; Bancroft, Gregory J; Titball, Richard W; (2012) Role of RelA and SpoT in Burkholderia pseudomallei virulence and immunity. Infection and immunity, 80 (9). pp. 3247-3255. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00178-12

Nagarajan, Niranjan; Bertrand, Denis; Hillmer, Axel M; Zang, Zhi Jiang; Yao, Fei; Jacques, Pierre-Étienne; Teo, Audrey SM; Cutcutache, Ioana; Zhang, Zhenshui; Lee, Wah Heng; +28 more... Sia, Yee Yen; Gao, Song; Ariyaratne, Pramila N; Ho, Andrea; Woo, Xing Yi; Veeravali, Lavanya; Ong, Choon Kiat; Deng, Niantao; Desai, Kartiki V; Khor, Chiea Chuen; Hibberd, Martin L; Shahab, Atif; Rao, Jaideepraj; Wu, Mengchu; Teh, Ming; Zhu, Feng; Chin, Sze Yung; Pang, Brendan; So, Jimmy BY; Bourque, Guillaume; Soong, Richie; Sung, Wing-Kin; Tean Teh, Bin; Rozen, Steven; Ruan, Xiaoan; Yeoh, Khay Guan; Tan, Patrick BO; Ruan, Yijun; (2012) Whole-genome reconstruction and mutational signatures in gastric cancer. Genome biology, 13 (12). R115-. ISSN 1465-6906 DOI: https://doi.org/10.1186/gb-2012-13-12-r115

Nawaz, Sameena; Allen, David J; Aladin, Farah; Gallimore, Christopher; Iturriza-Gómara, Miren; (2012) Human bocaviruses are not significantly associated with gastroenteritis: results of retesting archive DNA from a case control study in the UK. PloS one, 7 (7). e41346-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0041346

Nguyen, Nguyet Minh; Tran, Chau Nguyen Bich; Phung, Lam Khanh; Duong, Kien Thi Hue; Huynh, Huy le Anh; Farrar, Jeremy; Nguyen, Quyen Than Ha; Tran, Hien Tinh; Nguyen, Chau Van Vinh; Merson, Laura; +15 more... Hoang, Long Truong; Hibberd, Martin L; Aw, Pauline PK; Wilm, Andreas; Nagarajan, Niranjan; Nguyen, Dung Thi; Pham, Mai Phuong; Nguyen, Truong Thanh; Javanbakht, Hassan; Klumpp, Klaus; Hammond, Janet; Petric, Rosemary; Wolbers, Marcel; Nguyen, Chinh Tran; Simmons, Cameron P; (2012) A randomized, double-blind placebo controlled trial of balapiravir, a polymerase inhibitor, in adult dengue patients. The Journal of infectious diseases, 207 (9). pp. 1442-1450. ISSN 0022-1899 DOI: https://doi.org/10.1093/infdis/jis470

Nielsen, Lene N; Luijkx, Thomas A; Vegge, Christina S; Johnsen, Christina Kofoed; Nuijten, Piet; Wren, Brendan W; Ingmer, Hanne; Krogfelt, Karen A; (2012) Identification of immunogenic and virulence-associated Campylobacter jejuni proteins. Clinical and vaccine immunology, 19 (2). pp. 113-119. ISSN 1556-6811 DOI: https://doi.org/10.1128/CVI.05161-11 Full text not available from this repository.

Okell, Lucy C; Bousema, Teun; Griffin, Jamie T; Ouédraogo, André Lin; Ghani, Azra C; Drakeley, Chris J; (2012) Factors determining the occurrence of submicroscopic malaria infections and their relevance for control. Nature communications, 3 (1). 1237-. ISSN 2041-1723 DOI: https://doi.org/10.1038/ncomms2241

Olotu, Ally; Fegan, Gregory; Wambua, Juliana; Nyangweso, George; Ogada, Edna; Drakeley, Chris; Marsh, Kevin; Bejon, Philip; (2012) Estimating individual exposure to malaria using local prevalence of malaria infection in the field. PloS one, 7 (3). e32929-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0032929

Ottenhoff, Tom HM; Dass, Ranjeeta Hari; Yang, Ninghan; Zhang, Mingzi M; Wong, Hazel EE; Sahiratmadja, Edhyana; Khor, Chiea Chuen; Alisjahbana, Bachti; van Crevel, Reinout; Marzuki, Sangkot; +3 more... Seielstad, Mark; van de Vosse, Esther; Hibberd, Martin L; (2012) Genome-wide expression profiling identifies type 1 interferon response pathways in active tuberculosis. PloS one, 7 (9). e45839-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0045839

Pang, Junxiong; Salim, Agus; Lee, Vernon J; Hibberd, Martin L; Chia, Kee Seng; Leo, Yee Sin; Lye, David C; (2012) Diabetes with hypertension as risk factors for adult dengue hemorrhagic fever in a predominantly dengue serotype 2 epidemic: a case control study. PLoS neglected tropical diseases, 6 (5). e1641-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001641

Pathan, Ansar A; Minassian, Angela M; Sander, Clare R; Rowland, Rosalind; Porter, David W; Poulton, Ian D; Hill, Adrian VS; Fletcher, Helen A; McShane, Helen; (2012) Effect of vaccine dose on the safety and immunogenicity of a candidate TB vaccine, MVA85A, in BCG vaccinated UK adults. Vaccine, 30 (38). pp. 5616-5624. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2012.06.084

Paveley, Ross A; Mansour, Nuha R; Hallyburton, Irene; Bleicher, Leo S; Benn, Alex E; Mikic, Ivana; Guidi, Alessandra; Gilbert, Ian H; Hopkins, Andrew L; Bickle, Quentin D; (2012) Whole organism high-content screening by label-free, image-based Bayesian classification for parasitic diseases. PLoS neglected tropical diseases, 6 (7). e1762-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001762

Peña, Stella; Scarone, Laura; Manta, Eduardo; Stewart, Lindsay; Yardley, Vanessa; Croft, Simon; Serra, Gloria; (2012) Synthesis of a Microcystis aeruginosa predicted metabolite with antimalarial activity. Bioorganic & medicinal chemistry letters, 22 (15). pp. 4994-4997. ISSN 0960-894X DOI: https://doi.org/10.1016/j.bmcl.2012.06.028 Full text not available from this repository.

Pitt, Jonathan M; Stavropoulos, Evangelos; Redford, Paul S; Beebe, Amy M; Bancroft, Gregory J; Young, Douglas B; O'Garra, Anne; (2012) Blockade of IL-10 signaling during bacillus Calmette-Guérin vaccination enhances and sustains Th1, Th17, and innate lymphoid IFN-γ and IL-17 responses and increases protection to Mycobacterium tuberculosis infection. Journal of immunology (Baltimore, Md, 189 (8). pp. 4079-4087. ISSN 0022-1767 DOI: https://doi.org/10.4049/jimmunol.1201061 Full text not available from this repository.

Pitts, Alison C; Tuck, Laura R; Faulds-Pain, Alexandra; Lewis, Richard J; Marles-Wright, Jon; (2012) Structural insight into the Clostridium difficile ethanolamine utilisation microcompartment. PloS one, 7 (10). e48360-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0048360

Png, Eileen; Alisjahbana, Bachti; Sahiratmadja, Edhyana; Marzuki, Sangkot; Nelwan, Ron; Adnan, Iskandar; van de Vosse, Esther; Hibberd, Martin; van Crevel, Reinout; Ottenhoff, Tom HM; +1 more... Seielstad, Mark; (2012) Polymorphisms in SP110 are not associated with pulmonary tuberculosis in Indonesians. Infection, genetics and evolution, 12 (6). pp. 1319-1323. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2012.04.006 Full text not available from this repository.

Png, Eileen; Alisjahbana, Bachti; Sahiratmadja, Edhyana; Marzuki, Sangkot; Nelwan, Ron; Balabanova, Yanina; Nikolayevskyy, Vladyslav; Drobniewski, Francis; Nejentsev, Sergey; Adnan, Iskandar; +5 more... van de Vosse, Esther; Hibberd, Martin L; van Crevel, Reinout; Ottenhoff, Tom HM; Seielstad, Mark; (2012) A genome wide association study of pulmonary tuberculosis susceptibility in Indonesians. BMC medical genetics, 13 (1). 5-. ISSN 1471-2350 DOI: https://doi.org/10.1186/1471-2350-13-5

Polley, Spencer D; Sutherland, Colin J; Regan, Fiona; Hassan, Maha; Chiodini, Peter L; (2012) Increased sensitivity for detecting malaria parasites in human umbilical cord blood using scaled-up DNA preparation. Malaria journal, 11 (1). 62-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-62

Preston, Mark D; Manske, Magnus; Horner, Neil; Assefa, Samuel; Campino, Susana; Auburn, Sarah; Zongo, Issaka; Ouedraogo, Jean-Bosco; Nosten, Francois; Anderson, Tim; +1 more... Clark, Taane G; (2012) VarB: a variation browsing and analysis tool for variants derived from next-generation sequencing data. Bioinformatics (Oxford, England), 28 (22). pp. 2983-2985. ISSN 1367-4803 DOI: https://doi.org/10.1093/bioinformatics/bts557

RTS,S Clinical Trials Partnership; Agnandji, Selidji Todagbe; Lell, Bertrand; Fernandes, José Francisco; Abossolo, Béatrice Peggy; Methogo, Barbara Gaelle Nfono Ondo; Kabwende, Anita Lumeka; Adegnika, Ayola Akim; Mordmüller, Benjamin; Issifou, Saadou; +120 more... Kremsner, Peter Gottfried; Sacarlal, Jahit; Aide, Pedro; Lanaspa, Miguel; Aponte, John J; Machevo, Sonia; Acacio, Sozinho; Bulo, Helder; Sigauque, Betuel; Macete, Eusébio; Alonso, Pedro; Abdulla, Salim; Salim, Nahya; Minja, Rose; Mpina, Maxmillian; Ahmed, Saumu; Ali, Ali Mohammed; Mtoro, Ali Takadir; Hamad, Ali Said; Mutani, Paul; Tanner, Marcel; Tinto, Halidou; D'Alessandro, Umberto; Sorgho, Hermann; Valea, Innocent; Bihoun, Biébo; Guiraud, Issa; Kaboré, Berenger; Sombié, Olivier; Guiguemdé, Robert Tinga; Ouédraogo, Jean Bosco; Hamel, Mary J; Kariuki, Simon; Oneko, Martina; Odero, Chris; Otieno, Kephas; Awino, Norbert; McMorrow, Meredith; Muturi-Kioi, Vincent; Laserson, Kayla F; Slutsker, Laurence; Otieno, Walter; Otieno, Lucas; Otsyula, Nekoye; Gondi, Stacey; Otieno, Allan; Owira, Victorine; Oguk, Esther; Odongo, George; Woods, Jon Ben; Ogutu, Bernhards; Njuguna, Patricia; Chilengi, Roma; Akoo, Pauline; Kerubo, Christine; Maingi, Charity; Lang, Trudie; Olotu, Ally; Bejon, Philip; Marsh, Kevin; Mwambingu, Gabriel; Owusu-Agyei, Seth; Asante, Kwaku Poku; Osei-Kwakye, Kingsley; Boahen, Owusu; Dosoo, David; Asante, Isaac; Adjei, George; Kwara, Evans; Chandramohan, Daniel; Greenwood, Brian; Lusingu, John; Gesase, Samwel; Malabeja, Anangisye; Abdul, Omari; Mahende, Coline; Liheluka, Edwin; Malle, Lincoln; Lemnge, Martha; Theander, Thor G; Drakeley, Chris; Ansong, Daniel; Agbenyega, Tsiri; Adjei, Samuel; Boateng, Harry Owusu; Rettig, Theresa; Bawa, John; Sylverken, Justice; Sambian, David; Sarfo, Anima; Agyekum, Alex; Martinson, Francis; Hoffman, Irving; Mvalo, Tisungane; Kamthunzi, Portia; Nkomo, Rutendo; Tembo, Tapiwa; Tegha, Gerald; Tsidya, Mercy; Kilembe, Jane; Chawinga, Chimwemwe; Ballou, W Ripley; Cohen, Joe; Guerra, Yolanda; Jongert, Erik; Lapierre, Didier; Leach, Amanda; Lievens, Marc; Ofori-Anyinam, Opokua; Olivier, Aurélie; Vekemans, Johan; Carter, Terrell; Kaslow, David; Leboulleux, Didier; Loucq, Christian; Radford, Afiya; Savarese, Barbara; Schellenberg, David; Sillman, Marla; Vansadia, Preeti; (2012) A phase 3 trial of RTS,S/AS01 malaria vaccine in African infants. The New England journal of medicine, 367 (24). pp. 2284-2295. ISSN 0028-4793 DOI: https://doi.org/10.1056/NEJMoa1208394

Ramírez, Juan David; Guhl, Felipe; Messenger, Louisa A; Lewis, Michael D; Montilla, Marleny; Cucunuba, Zulma; Miles, Michael A; Llewellyn, Martin S; (2012) Contemporary cryptic sexuality in Trypanosoma cruzi. Molecular ecology, 21 (17). pp. 4216-4226. ISSN 0962-1083 DOI: https://doi.org/10.1111/j.1365-294X.2012.05699.x

Ridzuan, Mohd A Mohd; Moon, Robert W; Knuepfer, Ellen; Black, Sally; Holder, Anthony A; Green, Judith L; (2012) Subcellular location, phosphorylation and assembly into the motor complex of GAP45 during Plasmodium falciparum schizont development. PloS one, 7 (3). e33845-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0033845

Riedel, Charlotte Tandrup; Cohn, Marianne Thorup; Stabler, Richard A; Wren, Brendan; Brøndsted, Lone; (2012) Cellular response of Campylobacter jejuni to trisodium phosphate. Applied and environmental microbiology, 78 (5). pp. 1411-1415. ISSN 0099-2240 DOI: https://doi.org/10.1128/AEM.06556-11 Full text not available from this repository.

Rinchai, Darawan; Khaenam, Prasong; Kewcharoenwong, Chidchamai; Buddhisa, Surachat; Pankla, Rungnapa; Chaussabel, Damien; Bancroft, Gregory J; Lertmemongkolchai, Ganjana; (2012) Production of interleukin-27 by human neutrophils regulates their function during bacterial infection. European journal of immunology, 42 (12). pp. 3280-3290. ISSN 0014-2980 DOI: https://doi.org/10.1002/eji.201242526

Riyapa, Donporn; Buddhisa, Surachat; Korbsrisate, Sunee; Cuccui, Jon; Wren, Brendan W; Stevens, Mark P; Ato, Manabu; Lertmemongkolchai, Ganjana; (2012) Neutrophil extracellular traps exhibit antibacterial activity against burkholderia pseudomallei and are influenced by bacterial and host factors. Infection and immunity, 80 (11). pp. 3921-3929. ISSN 0019-9567 DOI: https://doi.org/10.1128/IAI.00806-12 Full text not available from this repository.

Roy, Polly; Noad, Rob; (2012) Use of bacterial artificial chromosomes in baculovirus research and recombinant protein expression: current trends and future perspectives. ISRN microbiology, 2012. 628797-. ISSN 2090-7478 DOI: https://doi.org/10.5402/2012/628797

Royer, Tricia L; Gilchrist, Carol; Kabir, Mamun; Arju, Tuhinur; Ralston, Katherine S; Haque, Rashidul; Clark, C Graham; Petri, William A; (2012) Entamoeba bangladeshi nov. sp., Bangladesh. Emerging infectious diseases, 18 (9). pp. 1543-1545. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid1809.120122

Ruecker, Andrea; Shea, Michael; Hackett, Fiona; Suarez, Catherine; Hirst, Elizabeth MA; Milutinovic, Katarina; Withers-Martinez, Chrislaine; Blackman, Michael J; (2012) Proteolytic activation of the essential parasitophorous vacuole cysteine protease SERA6 accompanies malaria parasite egress from its host erythrocyte. The Journal of biological chemistry, 287 (45). pp. 37949-37963. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M112.400820

Ruscanu, Suzana; Pascale, Florentina; Bourge, Mickael; Hemati, Behzad; Elhmouzi-Younes, Jamila; Urien, Céline; Bonneau, Michel; Takamatsu, Haru; Hope, Jayne; Mertens, Peter; +12 more... Meyer, Gilles; Stewart, Meredith; Roy, Polly; Meurs, Eliane F; Dabo, Stéphanie; Zientara, Stéphan; Breard, Emmanuel; Sailleau, Corinne; Chauveau, Emilie; Vitour, Damien; Charley, Bernard; Schwartz-Cornil, Isabelle; (2012) The double-stranded RNA bluetongue virus induces type I interferon in plasmacytoid dendritic cells via a MYD88-dependent TLR7/8-independent signaling pathway. Journal of virology, 86 (10). pp. 5817-5828. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.06716-11 Full text not available from this repository.

Saeed, Sadia; Tremp, Annie Z; Dessens, Johannes T; (2012) Conformational co-dependence between Plasmodium berghei LCCL proteins promotes complex formation and stability. Molecular and biochemical parasitology, 185 (2). pp. 170-173. ISSN 0166-6851 DOI: https://doi.org/10.1016/j.molbiopara.2012.07.007

Sawyer, Elizabeth B; Barker, Paul D; (2012) Continued surprises in the cytochrome c biogenesis story. Protein & cell, 3 (6). pp. 405-409. ISSN 1674-800X DOI: https://doi.org/10.1007/s13238-012-2912-x

Sawyer, Elizabeth B; Claessen, Dennis; Gras, Sally L; Perrett, Sarah; (2012) Exploiting amyloid: how and why bacteria use cross-β fibrils. Biochemical Society transactions, 40 (4). pp. 728-734. ISSN 0300-5127 DOI: https://doi.org/10.1042/BST20120013 Full text not available from this repository.

Sebina, Ismail; Cliff, Jacqueline M; Smith, Steven G; Nogaro, Sarah; Webb, Emily L; Riley, Eleanor M; Dockrell, Hazel M; Elliott, Alison M; Hafalla, Julius CR; Cose, Stephen; (2012) Long-lived memory B-cell responses following BCG vaccination. PloS one, 7 (12). e51381-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0051381

Sillitoe, Ian; Cuff, Alison L; Dessailly, Benoit H; Dawson, Natalie L; Furnham, Nicholas; Lee, David; Lees, Jonathan G; Lewis, Tony E; Studer, Romain A; Rentzsch, Robert; +3 more... Yeats, Corin; Thornton, Janet M; Orengo, Christine A; (2012) New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures. Nucleic acids research, 41 (Databa). D490-D498. ISSN 0305-1048 DOI: https://doi.org/10.1093/nar/gks1211

Sinden, Robert E; Blagborough, Andrew M; Churcher, Thomas; Ramakrishnan, Chandra; Biswas, Sumi; Delves, Michael J; (2012) The design and interpretation of laboratory assays measuring mosquito transmission of Plasmodium. Trends in parasitology, 28 (11). pp. 457-465. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2012.07.005 Full text not available from this repository.

Sinden, Robert E; Carter, Richard; Drakeley, Chris; Leroy, Didier; (2012) The biology of sexual development of Plasmodium: the design and implementation of transmission-blocking strategies. Malaria journal, 11 (1). 70-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-70

Smith, Miriam; Campino, Susana; Gu, Yong; Clark, Taane G; Otto, Thomas D; Maslen, Gareth; Manske, Magnus; Imwong, Mallika; Dondorp, Arjen M; Kwiatkowski, Dominic P; +2 more... Quail, Michael A; Swerdlow, Harold; (2012) An In-Solution Hybridisation Method for the Isolation of Pathogen DNA from Human DNA-rich Clinical Samples for Analysis by NGS. The Open Genomics Journal, 5 (1). pp. 18-29. DOI: https://doi.org/10.2174/1875693X01205010018

Smith, Steven G; Lecher, Sophie; Blitz, Rose; Locht, Camille; Dockrell, Hazel M; (2012) Broad heparin-binding haemagglutinin-specific cytokine and chemokine response in infants following Mycobacterium bovis BCG vaccination. European journal of immunology, 42 (9). pp. 2511-2522. ISSN 0014-2980 DOI: https://doi.org/10.1002/eji.201142297 Full text not available from this repository.

Solomon, Anthony W; Engels, Dirk; Bailey, Robin L; Blake, Isobel M; Brooker, Simon; Chen, Jia-Xu; Chen, Jun-Hu; Churcher, Thomas S; Drakeley, Chris J; Edwards, Tansy; +17 more... Fenwick, Alan; French, Michael; Gabrielli, Albis Francesco; Grassly, Nicholas C; Harding-Esch, Emma M; Holland, Martin J; Koukounari, Artemis; Lammie, Patrick J; Leslie, Jacqueline; Mabey, David C; Rhajaoui, Mohamed; Secor, W Evan; Stothard, J Russell; Wei, Hu; Willingham, A Lee; Zhou, Xiao-Nong; Peeling, Rosanna W; (2012) A diagnostics platform for the integrated mapping, monitoring, and surveillance of neglected tropical diseases: rationale and target product profiles. PLoS neglected tropical diseases, 6 (7). e1746-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001746

Spencer, John S; Duthie, Malcolm S; Geluk, Annemieke; Balagon, Marivic F; Kim, Hee Jin; Wheat, William H; Chatterjee, Delphi; Jackson, Mary; Li, Wei; Kurihara, Jade N; +5 more... Maghanoy, Armi; Mallari, Irene; Saunderson, Paul; Brennan, Patrick J; Dockrell, Hazel M; (2012) Identification of serological biomarkers of infection, disease progression and treatment efficacy for leprosy. Memorias do Instituto Oswaldo Cruz, 107 Su (suppl ). pp. 79-89. ISSN 0074-0276 DOI: https://doi.org/10.1590/s0074-02762012000900014

Stabler, Richard A; Dawson, Lisa F; Valiente, Esmeralda; Cairns, Michelle D; Martin, Melissa J; Donahue, Elizabeth H; Riley, Thomas V; Songer, J Glenn; Kuijper, Ed J; Dingle, Kate E; +1 more... Wren, Brendan W; (2012) Macro and micro diversity of Clostridium difficile isolates from diverse sources and geographical locations. PloS one, 7 (3). e31559-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0031559

Stensvold, C Rune; Alfellani, Mohammed; Clark, C Graham; (2012) Levels of genetic diversity vary dramatically between Blastocystis subtypes. Infection, genetics and evolution, 12 (2). pp. 263-273. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.11.002

Stensvold, C Rune; Lebbad, Marianne; Clark, C Graham; (2012) Last of the human protists: the phylogeny and genetic diversity of Iodamoeba. Molecular biology and evolution, 29 (1). pp. 39-42. ISSN 0737-4038 DOI: https://doi.org/10.1093/molbev/msr238

Stevenson, Jennifer; St Laurent, Brandyce; Lobo, Neil F; Cooke, Mary K; Kahindi, Samuel C; Oriango, Robin M; Harbach, Ralph E; Cox, Jonathan; Drakeley, Chris; (2012) Novel vectors of malaria parasites in the western highlands of Kenya. Emerging infectious diseases, 18 (9). pp. 1547-1549. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid1809.120283

Stewart, M; Dovas, CI; Chatzinasiou, E; Athmaram, TN; Papanastassopoulou, M; Papadopoulos, O; Roy, P; (2012) Protective efficacy of Bluetongue virus-like and subvirus-like particles in sheep: presence of the serotype-specific VP2, independent of its geographic lineage, is essential for protection. Vaccine, 30 (12). pp. 2131-2139. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2012.01.042 Full text not available from this repository.

Stone, Will; Bousema, Teun; Jones, Sophie; Gesase, Samwel; Hashim, Rhamadhan; Gosling, Roly; Carneiro, Ilona; Chandramohan, Daniel; Theander, Thor; Ronca, Raffaele; +3 more... Modiano, David; Arcà, Bruno; Drakeley, Chris; (2012) IgG responses to Anopheles gambiae salivary antigen gSG6 detect variation in exposure to malaria vectors and disease risk. PloS one, 7 (6). e40170-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0040170

Stresman, Gillian; Kobayashi, Tamaki; Kamanga, Aniset; Thuma, Philip E; Mharakurwa, Sungano; Moss, William J; Shiff, Clive; (2012) Malaria research challenges in low prevalence settings. Malaria journal, 11 (1). 353-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-353

Stuckey, Erin M; Stevenson, Jennifer C; Cooke, Mary K; Owaga, Chrispin; Marube, Elizabeth; Oando, George; Hardy, Diggory; Drakeley, Chris; Smith, Thomas A; Cox, Jonathan; +1 more... Chitnis, Nakul; (2012) Simulation of malaria epidemiology and control in the highlands of Western Kenya. Malaria journal, 11 (1). 357-. ISSN 1475-2875 DOI: https://doi.org/10.1186/1475-2875-11-357

Talisuna, AO; Karema, C; Ogutu, B; Juma, E; Logedi, J; Nyandigisi, A; Mulenga, M; Mbacham, W; Roper, C; Guerin, P; +2 more... Dalessandro, U; Snow., RW; (2012) Mitigating the threats of artemisinin resistance in Africa: Requirements for enhanced wide coverage malaria drug resistance surveillance and response systems. Lancet Infectious Diseases, 12 (11). pp. 888-896. DOI: https://doi.org/10.1016/S1473-3099(12)70241-4

Terra, Vanessa S; Mills, Dominic C; Yates, Laura E; Abouelhadid, Sherif; Cuccui, Jon; Wren, Brendan W; (2012) Recent developments in bacterial protein glycan coupling technology and glycoconjugate vaccine design. Journal of medical microbiology, 61 (Pt 7). pp. 919-926. ISSN 0022-2615 DOI: https://doi.org/10.1099/jmm.0.039438-0 Full text not available from this repository.

Torres, Eva; Duque, María D; López-Querol, Marta; Taylor, Martin C; Naesens, Lieve; Ma, Chunlong; Pinto, Lawrence H; Sureda, Francesc X; Kelly, John M; Vázquez, Santiago; (2012) Synthesis of benzopolycyclic cage amines: NMDA receptor antagonist, trypanocidal and antiviral activities. Bioorganic & medicinal chemistry, 20 (2). pp. 942-948. ISSN 0968-0896 DOI: https://doi.org/10.1016/j.bmc.2011.11.050 Full text not available from this repository.

Toure, Ousmane; Konate, Salimata; Sissoko, Sibiri; Niangaly, Amadou; Barry, Abdoulaye; Sall, Abdourahmane H; Diarra, Elisabeth; Poudiougou, Belco; Sepulveda, Nuno; Campino, Susana; +5 more... Rockett, Kirk A; Clark, Taane G; Thera, Mahamadou A; Doumbo, Ogobara; Collaboration with The MalariaGEN Consortium; (2012) Candidate polymorphisms and severe malaria in a Malian population. PloS one, 7 (9). e43987-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0043987

Trilok-Kumar, G; Arora, H; Rajput, M; Chellani, H; Singh, V; Raynes, J; Arya, S; Aggarwal, S; Srivastava, N; Sachdev, HPS; +1 more... Filteau, S; (2012) Effect of vitamin D supplementation of low birth weight term Indian infants from birth on cytokine production at 6 months. European journal of clinical nutrition, 66 (6). pp. 746-750. ISSN 0954-3007 DOI: https://doi.org/10.1038/ejcn.2012.33 Full text not available from this repository.

Vervoort, Jascha; Baraniak, Anna; Gazin, Muriel; Sabirova, Julia; Lammens, Christine; Kazma, Meital; Grabowska, Anna; Izdebski, Radosław; Carmeli, Yehuda; Kumar-Singh, Samir; +5 more... Gniadkowski, Marek; Goossens, Herman; Malhotra-Kumar, Surbhi; MOSAR WP2; SATURN WP1 study groups; (2012) Characterization of two new CTX-M-25-group extended-spectrum β-lactamase variants identified in Escherichia coli isolates from Israel. PloS one, 7 (9). e46329-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0046329

Vieira, Paula Melo de Abreu; Francisco, Amanda Fortes; Machado, Evandro Marques de Meneses; Nogueira, Nívia Carolina; Fonseca, Kátia da Silva; Reis, Alexandre Barbosa; Teixeira-Carvalho, Andrea; Martins-Filho, Olindo Assis; Tafuri, Washington Luiz; Carneiro, Cláudia Martins; (2012) Different infective forms trigger distinct immune response in experimental Chagas disease. PloS one, 7 (3). e32912-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0032912

Villegas-Mendez, Ana; Greig, Rachel; Shaw, Tovah N; de Souza, J Brian; Gwyer Findlay, Emily; Stumhofer, Jason S; Hafalla, Julius CR; Blount, Daniel G; Hunter, Christopher A; Riley, Eleanor M; +1 more... Couper, Kevin N; (2012) IFN-γ-producing CD4+ T cells promote experimental cerebral malaria by modulating CD8+ T cell accumulation within the brain. Journal of immunology (Baltimore, Md, 189 (2). pp. 968-979. ISSN 0022-1767 DOI: https://doi.org/10.4049/jimmunol.1200688 Full text not available from this repository.

Vithana, Eranga N; Khor, Chiea-Chuen; Qiao, Chunyan; Nongpiur, Monisha E; George, Ronnie; Chen, Li-Jia; Do, Tan; Abu-Amero, Khaled; Huang, Chor Kai; Low, Sancy; +69 more... Tajudin, Liza-Sharmini A; Perera, Shamira A; Cheng, Ching-Yu; Xu, Liang; Jia, Hongyan; Ho, Ching-Lin; Sim, Kar Seng; Wu, Ren-Yi; Tham, Clement CY; Chew, Paul TK; Su, Daniel H; Oen, Francis T; Sarangapani, Sripriya; Soumittra, Nagaswamy; Osman, Essam A; Wong, Hon-Tym; Tang, Guangxian; Fan, Sujie; Meng, Hailin; Huong, Dao TL; Wang, Hua; Feng, Bo; Baskaran, Mani; Shantha, Balekudaru; Ramprasad, Vedam L; Kumaramanickavel, Govindasamy; Iyengar, Sudha K; How, Alicia C; Lee, Kelvin Y; Sivakumaran, Theru A; Yong, Victor HK; Ting, Serena ML; Li, Yang; Wang, Ya-Xing; Tay, Wan-Ting; Sim, Xueling; Lavanya, Raghavan; Cornes, Belinda K; Zheng, Ying-Feng; Wong, Tina T; Loon, Seng-Chee; Yong, Vernon KY; Waseem, Naushin; Yaakub, Azhany; Chia, Kee-Seng; Allingham, R Rand; Hauser, Michael A; Lam, Dennis SC; Hibberd, Martin L; Bhattacharya, Shomi S; Zhang, Mingzhi; Teo, Yik Ying; Tan, Donald T; Jonas, Jost B; Tai, E-Shyong; Saw, Seang-Mei; Hon, Do Nhu; Al-Obeidan, Saleh A; Liu, Jianjun; Chau, Tran Nguyen Bich; Simmons, Cameron P; Bei, Jin-Xin; Zeng, Yi-Xin; Foster, Paul J; Vijaya, Lingam; Wong, Tien-Yin; Pang, Chi-Pui; Wang, Ningli; Aung, Tin; (2012) Genome-wide association analyses identify three new susceptibility loci for primary angle closure glaucoma. Nature genetics, 44 (10). pp. 1142-1146. ISSN 1061-4036 DOI: https://doi.org/10.1038/ng.2390 Full text not available from this repository.

Walther, Michael; De Caul, Adam; Aka, Peter; Njie, Madi; Amambua-Ngwa, Alfred; Walther, Brigitte; Predazzi, Irene M; Cunnington, Aubrey; Deininger, Susanne; Takem, Ebako N; +7 more... Ebonyi, Augustine; Weis, Sebastian; Walton, Robert; Rowland-Jones, Sarah; Sirugo, Giorgio; Williams, Scott M; Conway, David J; (2012) HMOX1 gene promoter alleles and high HO-1 levels are associated with severe malaria in Gambian children. PLoS pathogens, 8 (3). e1002579-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1002579

Weedall, Gareth D; Clark, C Graham; Koldkjaer, Pia; Kay, Suzanne; Bruchhaus, Iris; Tannich, Egbert; Paterson, Steve; Hall, Neil; (2012) Genomic diversity of the human intestinal parasite Entamoeba histolytica. Genome biology, 13 (5). R38-. ISSN 1465-6906 DOI: https://doi.org/10.1186/gb-2012-13-5-r38

Wight, Darren J; Boucherit, Virginie C; Nader, Mirella; Allen, David J; Taylor, Ian A; Bishop, Kate N; (2012) The gammaretroviral p12 protein has multiple domains that function during the early stages of replication. Retrovirology, 9 (1). 83-. ISSN 1742-4690 DOI: https://doi.org/10.1186/1742-4690-9-83

Wilm, Andreas; Aw, Pauline Poh Kim; Bertrand, Denis; Yeo, Grace Hui Ting; Ong, Swee Hoe; Wong, Chang Hua; Khor, Chiea Chuen; Petric, Rosemary; Hibberd, Martin Lloyd; Nagarajan, Niranjan; (2012) LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets. Nucleic acids research, 40 (22). pp. 11189-11201. ISSN 0305-1048 DOI: https://doi.org/10.1093/nar/gks918

Withers-Martinez, Chrislaine; Suarez, Catherine; Fulle, Simone; Kher, Samir; Penzo, Maria; Ebejer, Jean-Paul; Koussis, Kostas; Hackett, Fiona; Jirgensons, Aigars; Finn, Paul; +1 more... Blackman, Michael J; (2012) Plasmodium subtilisin-like protease 1 (SUB1): insights into the active-site structure, specificity and function of a pan-malaria drug target. International journal for parasitology, 42 (6). pp. 597-612. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2012.04.005

Wong, Michelle; Öhrmalm, Lars; Broliden, Kristina; Aust, Carl; Hibberd, Martin; Tolfvenstam, Thomas; (2012) Mannose-binding lectin 2 polymorphisms do not influence frequency or type of infection in adults with chemotherapy induced neutropaenia. PloS one, 7 (2). e30819-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0030819

Yindom, L-M; Forbes, R; Aka, P; Janha, O; Jeffries, D; Jallow, M; Conway, DJ; Walther, M; (2012) Killer-cell immunoglobulin-like receptors and malaria caused by Plasmodium falciparum in The Gambia. Tissue antigens, 79 (2). pp. 104-113. ISSN 0001-2815 DOI: https://doi.org/10.1111/j.1399-0039.2011.01818.x

Zakikhany, Katherina; Allen, David J; Brown, David; Iturriza-Gómara, Miren; (2012) Molecular evolution of GII-4 Norovirus strains. PloS one, 7 (7). e41625-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0041625

Zelmer, Andrea; Carroll, Paul; Andreu, Nuria; Hagens, Kristine; Mahlo, Jacqueline; Redinger, Natalja; Robertson, Brian D; Wiles, Siouxsie; Ward, Theresa H; Parish, Tanya; +3 more... Ripoll, Jorge; Bancroft, Gregory J; Schaible, Ulrich E; (2012) A new in vivo model to test anti-tuberculosis drugs using fluorescence imaging. The Journal of antimicrobial chemotherapy, 67 (8). pp. 1948-1960. ISSN 0305-7453 DOI: https://doi.org/10.1093/jac/dks161

Zingales, Bianca; Miles, Michael A; Campbell, David A; Tibayrenc, Michel; Macedo, Andrea M; Teixeira, Marta MG; Schijman, Alejandro G; Llewellyn, Martin S; Lages-Silva, Eliane; Machado, Carlos R; +2 more... Andrade, Sonia G; Sturm, Nancy R; (2012) The revised Trypanosoma cruzi subspecific nomenclature: rationale, epidemiological relevance and research applications. Infection, genetics and evolution, 12 (2). pp. 240-253. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.12.009 Full text not available from this repository.

Zumaya-Estrada, Federico A; Messenger, Louisa A; Lopez-Ordonez, Teresa; Lewis, Michael D; Flores-Lopez, Carlos A; Martínez-Ibarra, Alejandro J; Pennington, Pamela M; Cordon-Rosales, Celia; Carrasco, Hernan V; Segovia, Maikel; +2 more... Miles, Michael A; Llewellyn, Martin S; (2012) North American import? Charting the origins of an enigmatic Trypanosoma cruzi domestic genotype. Parasites & vectors, 5 (1). 226-. ISSN 1756-3305 DOI: https://doi.org/10.1186/1756-3305-5-226

da Silva Santos, Simone; Clark, Taane G; Campino, Susana; Suarez-Mutis, Martha Cecília; Rockett, Kirk A; Kwiatkowski, Dominic P; Fernandes, Octavio; (2012) Investigation of host candidate malaria-associated risk/protective SNPs in a Brazilian Amazonian population. PloS one, 7 (5). e36692-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0036692

Dautu, George; Sindato, Calvin; Mweene, Aaron S; Samui, Kenny L; Roy, Polly; Noad, Robert; Paweska, Janusz; Majiwa, Phelix AO; Musoke, Antony; (2012) Rift Valley fever: Real or perceived threat for Zambia? [Conference or Workshop Item] https://doi.org/10.4102/ojvr.v79i2.466 Full text not available from this repository.