Bugembe, Daniel Lule; Ekii, Andrew Obuku; Ndembi, Nicaise; Serwanga, Jennifer; Kaleebu, Pontiano; Pala, Pietro; (2020) Computational MHC-I epitope predictor identifies 95% of experimentally mapped HIV-1 clade A and D epitopes in a Ugandan cohort. BMC infectious diseases, 20 (1). 172-. ISSN 1471-2334 DOI: https://doi.org/10.1186/s12879-020-4876-4

Gombe, Ben; Streatfield, Claire; Leal, Lorna; Opio, Solomon; Joseph, Sarah; Weber, Jonathan; Hare, Jonathan; Kaleebu, Pontiano; Serwanga, Jennifer; (2022) Optimization and validation of an ELISA assay for the determination of antibody responses to CN54gp140 and AIDSVAX BE for use in the Phase IIb PrEPVacc vaccine trial. PloS One, 17 (11). e0275927-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0275927

Kalungi, Allan; Seedat, Soraya; Hemmings, Sian MJ; van der Merwe, Lize; Joloba, Moses L; Nanteza, Ann; Nakassujja, Noeline; Birabwa, Harriet; Serwanga, Jennifer; Kaleebu, Pontiano; +1 more... Kinyanda, Eugene; (2017) Association between serotonin transporter gene polymorphisms and increased suicidal risk among HIV positive patients in Uganda. BMC genetics, 18 (1). 71-. ISSN 1471-2156 DOI: https://doi.org/10.1186/s12863-017-0538-y

Kebba, Anthony; Kaleebu, Pontiano; Serwanga, Jennifer; Rowland, Samantha; Yirrell, David; Downing, Robert; Gilmour, Jill; Imami, Nesrina; Gotch, Frances; Whitworth, Jimmy; (2004) HIV type 1 antigen-responsive CD4+ T-lymphocytes in exposed yet HIV Type 1 seronegative Ugandans. AIDS research and human retroviruses, 20 (1). pp. 67-75. ISSN 0889-2229 DOI: https://doi.org/10.1089/088922204322749512 Full text not available from this repository.

Kitonsa, Jonathan; Kamacooko, Onesmus; Ruzagira, Eugene; Nambaziira, Florence; Abaasa, Andrew; Serwanga, Jennifer; Gombe, Ben; Lunkuse, Jane; Naluyinda, Hadijah; Tukamwesiga, Naboth; +8 more... Namata, Tamara; Kigozi, Antony; Kafeero, Paddy; Basajja, Vincent; Joseph, Sarah; Pierce, Benjamin F; Shattock, Robin; Kaleebu, Pontiano; (2023) A phase I COVID-19 vaccine trial among SARS-CoV-2 seronegative and seropositive individuals in Uganda utilizing a self-amplifying RNA vaccine platform: Screening and enrollment experiences. Human vaccines & immunotherapeutics, 19 (2). 2240690-. ISSN 2164-5515 DOI: https://doi.org/10.1080/21645515.2023.2240690

Lutalo, Tom; Nalumansi, Aminah; Olara, Denis; Kayiwa, John; Ogwang, Bernard; Odwilo, Emmanuel; Watera, Christine; Balinandi, Stephen; Kiconco, Jocelyn; Nakaseegu, Joweria; +10 more... Serwanga, Jennifer; Kikaire, Bernard; Ssemwanga, Deogratius; Abiko, Brendah; Nsereko, Christopher; Cotten, Matthew; Buule, Joshua; Lutwama, Julius; Downing, Robert; Kaleebu, Pontiano; (2021) Evaluation of the performance of 25 SARS-CoV-2 serological rapid diagnostic tests using a reference panel of plasma specimens at the Uganda Virus Research Institute. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, 112. pp. 281-287. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2021.09.020

Maust, Brandon S; Petkov, Stefan; Herrera, Carolina; Feng, Colin; Brown, Bryan P; Lebina, Limakatso; Opoka, Daniel; Ssemata, Andrew; Pillay, Natasha; Serwanga, Jennifer; +12 more... Seatlholo, Portia; Namubiru, Patricia; Odoch, Geoffrey; Mugaba, Susan; Seiphetlo, Thabiso; Gray, Clive M; Kaleebu, Pontiano; Webb, Emily L; Martinson, Neil; Chiodi, Francesca; Fox, Julie; Jaspan, Heather B; (2023) Bacterial microbiome and host inflammatory gene expression in foreskin tissue. Heliyon, 9. e22145. ISSN 2405-8440 DOI: https://doi.org/10.1016/j.heliyon.2023.e22145

Nakiboneka, Ritah; Mugaba, Susan; Auma, Betty O; Kintu, Christopher; Lindan, Christina; Nanteza, Mary Bridget; Kaleebu, Pontiano; Serwanga, Jennifer; (2019) Interferon gamma (IFN-γ) negative CD4+ and CD8+ T-cells can produce immune mediators in response to viral antigens. Vaccine, 37 (1). pp. 113-122. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2018.11.024

Nalumansi, Aminah; Lutalo, Tom; Kayiwa, John; Watera, Christine; Balinandi, Stephen; Kiconco, Jocelyn; Nakaseegu, Joweria; Olara, Denis; Odwilo, Emmanuel; Serwanga, Jennifer; +12 more... Kikaire, Bernard; Ssemwanga, Deogratius; Nabadda, Susan; Ssewanyana, Isaac; Atwine, Diane; Mwebesa, Henry; Bosa, Henry Kyobe; Nsereko, Christopher; Cotten, Matthew; Downing, Robert; Lutwama, Julius; Kaleebu, Pontiano; (2020) Field evaluation of the performance of a SARS-CoV-2 antigen rapid diagnostic test in Uganda using nasopharyngeal samples. International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases, 104. pp. 282-286. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2020.10.073

Ndembi, N; Lyagoba, F; Nanteza, B; Kushemererwa, G; Serwanga, J; Katongole-Mbidde, E; Grosskurth, H; Kaleebu, P; Uganda HIV Drug Resistance Working Group; (2008) Transmitted antiretroviral drug resistance surveillance among newly HIV type 1-diagnosed women attending an antenatal clinic in Entebbe, Uganda. AIDS research and human retroviruses, 24 (6). pp. 889-895. ISSN 0889-2229 DOI: https://doi.org/10.1089/aid.2007.0317 Full text not available from this repository.

Oluka, Gerald Kevin; Namubiru, Patricia; Kato, Laban; Ankunda, Violet; Gombe, Ben; Cotten, Matthew; COVID-19 Immunoprofiling Team; Musenero, Monica; Kaleebu, Pontiano; Fox, Julie; +1 more... Serwanga, Jennifer; (2023) Optimisation and Validation of a conventional ELISA and cut-offs for detecting and quantifying anti-SARS-CoV-2 Spike, RBD, and Nucleoprotein IgG, IgM, and IgA antibodies in Uganda. Frontiers in immunology, 14. 1113194-. ISSN 1664-3224 DOI: https://doi.org/10.3389/fimmu.2023.1113194

Pala, Pietro; Serwanga, Jennifer; Watera, Christine; Ritchie, Adam J; Moodie, Zoe; Wang, Maggie; Goonetilleke, Nilu; Birabwa, Ester; Hughes, Peter; Senkaali, David; +6 more... Nakiboneka, Ritah; Grosskurth, Heiner; Haynes, Bart; McMichael, Andrew; Kaleebu, Pontiano; Center for HIV/AIDS Vaccine Immunology; (2013) Quantitative and qualitative differences in the T cell response to HIV in uninfected Ugandans exposed or unexposed to HIV-infected partners. Journal of virology, 87 (16). pp. 9053-9063. ISSN 0022-538X DOI: https://doi.org/10.1128/JVI.00721-13 Full text not available from this repository.

Petkov, Stefan; Herrera, Carolina; Else, Laura; Lebina, Limakatso; Opoka, Daniel; Seiphetlo, Thabiso B; Pillay, Azure-Dee Ap; Mugaba, Susan; Namubiru, Patricia; Odoch, Geoffrey; +9 more... Ssemata, Andrew S; Serwanga, Jennifer; Kaleebu, Pontiano; Webb, Emily L; Khoo, Saye; Martinson, Neil; Gray, Clive M; Fox, Julie; Chiodi, Francesca; (2022) Short-term oral pre-exposure prophylaxis against HIV-1 modulates the transcriptome of foreskin tissue in young men in Africa. Frontiers in immunology, 13. 1009978-. ISSN 1664-3224 DOI: https://doi.org/10.3389/fimmu.2022.1009978

Petkov, Stefan; Herrera, Carolina; Else, Laura; Mugaba, Susan; Namubiru, Patricia; Odoch, Geoffrey; Opoka, Daniel; Pillay, Azure-Dee AP; Seiphetlo, Thabiso B; Serwanga, Jennifer; +9 more... Ssemata, Andrew S; Kaleebu, Pontiano; Webb, Emily L; Khoo, Saye; Lebina, Limakatso; Gray, Clive M; Martinson, Neil; Fox, Julie; Chiodi, Francesca; (2022) Mobilization of systemic CCL4 following HIV pre-exposure prophylaxis in young men in Africa. Frontiers in Immunology, 13. 965214-. ISSN 1664-3224 DOI: https://doi.org/10.3389/fimmu.2022.965214

Rametse, Cosnet L; Webb, Emily L; Herrera, Carolina; Alinde, Berenice; Besethi, Asiphe; Motaung, Bongani; Mbangiwa, Tshepiso; Leach, Lloyd; Sebaa, Shorok; Pillay, Azure-Dee AP; +18 more... Seiphetlo, Thabiso B; Malhangu, Boitshoko; Petkov, Stefan; Else, Laura; Mugaba, Susan; Namubiru, Patricia; Odoch, Geoffrey; Opoka, Daniel; Serwanga, Jennifer; Ssemata, Andrew S; Kaleebu, Pontiano; Khoo, Saye; Lebina, Limakatso; Martinson, Neil; Chiodi, Francesca; Fox, Julie; Gray, Clive M; CHAPS consortium; (2023) A randomized clinical trial of on-demand oral pre-exposure prophylaxis does not modulate lymphoid/myeloid HIV target cell density in the foreskin. AIDS (London, England), 37 (11). pp. 1651-1659. ISSN 0269-9370 DOI: https://doi.org/10.1097/QAD.0000000000003619

Serwanga, Jennifer; Ankunda, Violet; Sembera, Jackson; Kato, Laban; Oluka, Gerald Kevin; Baine, Claire; Odoch, Geoffrey; Kayiwa, John; Auma, Betty Oliver; Jjuuko, Mark; +9 more... Nsereko, Christopher; Cotten, Matthew; Onyachi, Nathan; Muwanga, Moses; Lutalo, Tom; Fox, Julie; Musenero, Monica; Kaleebu, Pontiano; COVID-19 Immunoprofiling Team; (2023) Rapid, early, and potent Spike-directed IgG, IgM, and IgA distinguish asymptomatic from mildly symptomatic COVID-19 in Uganda, with IgG persisting for 28 months. Frontiers in immunology, 14. 1152522-. ISSN 1664-3224 DOI: https://doi.org/10.3389/fimmu.2023.1152522

Serwanga, Jennifer; Mugaba, Susan; Betty, Auma; Pimego, Edward; Walker, Sarah; Munderi, Paula; Gilks, Charles; Gotch, Frances; Grosskurth, Heiner; Kaleebu, Pontiano; (2011) CD8 T-Cell Responses before and after Structured Treatment Interruption in Ugandan Adults Who Initiated ART with CD4 T Cells <200 Cell/μL: The DART Trial STI Substudy. AIDS research and treatment, 2011. 875028-. ISSN 2090-1240 DOI: https://doi.org/10.1155/2011/875028

Serwanga, Jennifer; Nakiboneka, Ritah; Mugaba, Susan; Magambo, Brian; Ndembi, Nicaise; Gotch, Frances; Kaleebu, Pontiano; (2015) Frequencies of Gag-restricted T-cell escape "footprints" differ across HIV-1 clades A1 and D chronically infected Ugandans irrespective of host HLA B alleles. Vaccine, 33 (14). pp. 1664-1672. ISSN 0264-410X DOI: https://doi.org/10.1016/j.vaccine.2015.02.037

Serwanga, Jennifer; Shafer, Leigh Anne; Pimego, Edward; Auma, Betty; Watera, Christine; Rowland, Samantha; Yirrell, David; Pala, Pietro; Grosskurth, Heiner; Whitworth, Jimmy; +2 more... Gotch, Frances; Kaleebu, Pontiano; (2009) Host HLA B*allele-associated multi-clade Gag T-cell recognition correlates with slow HIV-1 disease progression in antiretroviral therapy-naïve Ugandans. PloS one, 4 (1). e4188-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0004188