Bhattacharyya, Tapan; Murphy, Niamh; Miles, Michael A; (2024) Diversity of Chagas disease diagnostic antigens: Successes and limitations. PLoS neglected tropical diseases, 18 (10). e0012512-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0012512

Murphy, N; (2024) Development of Rapid Diagnostic Tests for Trypanosoma cruzi Lineage-Specific Serology, Comparative Epidemiology and for Monitoring Efficacy of Chemotherapy. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04673813

Marlais, Tegwen; Bickford-Smith, Jack; Talavera-López, Carlos; Le, Hai; Chowdhury, Fatima; Miles, Michael A; (2023) A comparative 'omics' approach for prediction of candidate Strongyloides stercoralis diagnostic coproantigens. PLoS neglected tropical diseases, 17 (4). e0010777-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0010777

Matos, Gabriel Machado; Lewis, Michael D; Talavera-López, Carlos; Yeo, Matthew; Grisard, Edmundo C; Messenger, Louisa A; Miles, Michael A; Andersson, Björn; (2022) Microevolution of Trypanosoma cruzi reveals hybridization and clonal mechanisms driving rapid genome diversification. eLife, 11. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.75237

Miles, Michael A; (2022) Trypanosoma cruzi and Chagas disease: diversity, progress and challenges. Memórias do Instituto Oswaldo Cruz, 117. e210193chgsb-. ISSN 0074-0276 DOI: https://doi.org/10.1590/0074-02760210193chgsb

Simonson, Poppy; Bhattacharyya, Tapan; El-Safi, Sayda; Miles, Michael A; (2022) Linear and conformational determinants of visceral leishmaniasis diagnostic antigens rK28 and rK39. Parasites & vectors, 15 (1). 387-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-022-05495-1

Summers, Shannan; Bhattacharyya, Tapan; Allan, Fiona; Stothard, J Russell; Edielu, Andrew; Webster, Bonnie L; Miles, Michael A; Bustinduy, Amaya L; (2022) A review of the genetic determinants of praziquantel resistance in Schistosoma mansoni: Is praziquantel and intestinal schistosomiasis a perfect match? Frontiers in Tropical Diseases, 3. DOI: https://doi.org/10.3389/fitd.2022.933097

Abad-Franch, Fernando; Monteiro, Fernando A; Pavan, Márcio G; Patterson, James S; Bargues, M Dolores; Zuriaga, M Ángeles; Aguilar, Marcelo; Beard, Charles B; Mas-Coma, Santiago; Miles, Michael A; (2021) Correction to: Under pressure: phenotypic divergence and convergence associated with microhabitat adaptations in Triatominae. Parasites & vectors, 14 (1). 235-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-021-04729-y

Abad-Franch, Fernando; Monteiro, Fernando A; Pavan, Márcio G; Patterson, James S; Bargues, M Dolores; Zuriaga, M Ángeles; Aguilar, Marcelo; Beard, Charles B; Mas-Coma, Santiago; Miles, Michael A; (2021) Under pressure: phenotypic divergence and convergence associated with microhabitat adaptations in Triatominae. Parasites & vectors, 14 (1). 195-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-021-04647-z

Fujisawa, Kyoko; Silcott-Niles, Charlotte; Simonson, Poppy; Lamattina, Daniela; Humeres, Cristian A; Bhattacharyya, Tapan; Mertens, Pascal; Thunissen, Caroline; O'Rourke, Victoria; Pańczuk, Magdalena; +3 more... Whitworth, James A; Salomón, Oscar Daniel; Miles, Michael A; (2021) Emergent canine visceral leishmaniasis in Argentina: Comparative diagnostics and relevance to proliferation of human disease. PLoS neglected tropical diseases, 15 (7). e0009552-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0009552

Murphy, Niamh; Cardinal, M Victoria; Bhattacharyya, Tapan; Enriquez, Gustavo F; Macchiaverna, Natalia P; Alvedro, Alejandra; Freilij, Héctor; Martinez de Salazar, Pablo; Molina, Israel; Mertens, Pascal; +3 more... Gilleman, Quentin; Gürtler, Ricardo E; Miles, Michael A; (2021) Assessing antibody decline after chemotherapy of early chronic Chagas disease patients. Parasites & vectors, 14 (1). 543-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-021-05040-6

Sanchez, Leny; Messenger, Louisa A; Bhattacharyya, Tapan; Gilman, Robert H; Mayta, Holger; Colanzi, Rony; Bozo, Ricardo; Verástegui, Manuela; Miles, Michael A; Bern, Caryn; (2021) Congenital Chagas disease in Santa Cruz Department, Bolivia, is dominated by Trypanosoma cruzi lineage V. Transactions of the Royal Society of Tropical Medicine and Hygiene, 116 (1). pp. 80-84. ISSN 0035-9203 DOI: https://doi.org/10.1093/trstmh/trab089

Talavera-López, Carlos; Messenger, Louisa A; Lewis, Michael D; Yeo, Matthew; Reis-Cunha, João Luís; Matos, Gabriel Machado; Bartholomeu, Daniella C; Calzada, José E; Saldaña, Azael; Ramírez, Juan David; +16 more... Guhl, Felipe; Ocaña-Mayorga, Sofía; Costales, Jaime A; Gorchakov, Rodion; Jones, Kathryn; Nolan, Melissa S; Teixeira, Santuza MR; Carrasco, Hernán José; Bottazzi, Maria Elena; Hotez, Peter J; Murray, Kristy O; Grijalva, Mario J; Burleigh, Barbara; Grisard, Edmundo C; Miles, Michael A; Andersson, Björn; (2021) Repeat-Driven Generation of Antigenic Diversity in a Major Human Pathogen, Trypanosoma cruzi. Frontiers in Cellular and Infection Microbiology, 11. 614665-. DOI: https://doi.org/10.3389/fcimb.2021.614665

Cotton, James A; Durrant, Caroline; Franssen, Susanne U; Gelanew, Tesfaye; Hailu, Asrat; Mateus, David; Sanders, Mandy J; Berriman, Matthew; Volf, Petr; Miles, Michael A; +1 more... Yeo, Matthew; (2020) Genomic analysis of natural intra-specific hybrids among Ethiopian isolates of Leishmania donovani. PLoS neglected tropical diseases, 14 (4). e0007143-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0007143

Franco, Caio H; Warhurst, David C; Bhattacharyya, Tapan; Au, Ho YA; Le, Hai; Giardini, Miriam A; Pascoalino, Bruno S; Torrecilhas, Ana Claudia; Romera, Lavinia MD; Madeira, Rafael Pedro; +5 more... Schenkman, Sergio; Freitas-Junior, Lucio H; Chatelain, Eric; Miles, Michael A; Moraes, Carolina B; (2020) Novel structural CYP51 mutation in Trypanosoma cruzi associated with multidrug resistance to CYP51 inhibitors and reduced infectivity. INTERNATIONAL JOURNAL FOR PARASITOLOGY-DRUGS AND DRUG RESISTANCE, 13. pp. 107-120. ISSN 2211-3207 DOI: https://doi.org/10.1016/j.ijpddr.2020.06.001 Item availability may be restricted.

Franssen, Susanne U; Durrant, Caroline; Stark, Olivia; Moser, Bettina; Downing, Tim; Imamura, Hideo; Dujardin, Jean-Claude; Sanders, Mandy J; Mauricio, Isabel; Miles, Michael A; +11 more... Schnur, Lionel F; Jaffe, Charles L; Nasereddin, Abdelmajeed; Schallig, Henk; Yeo, Matthew; Bhattacharyya, Tapan; Alam, Mohammad Z; Berriman, Matthew; Wirth, Thierry; Schönian, Gabriele; Cotton, James A; (2020) Global genome diversity of the Leishmania donovani complex. ELIFE, 9. ISSN 2050-084X DOI: https://doi.org/10.7554/eLife.51243

Marlais, Tegwen; Bhattacharyya, Tapan; Pearson, Callum; Gardner, Bathsheba L; Marhoon, Safiyyah; Airs, Stephanie; Hayes, Kiera; Falconar, Andrew K; Singh, Om Prakash; Reed, Steven G; +3 more... El-Safi, Sayda; Sundar, Shyam; Miles, Michael A; (2020) Isolation and characterisation of Leishmania donovani protein antigens from urine of visceral leishmaniasis patients. PLOS ONE, 15 (9). e0238840-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0238840

McClean, Mairi CW; Bhattacharyya, Tapan; Mertens, Pascal; Murphy, Niamh; Gilleman, Quentin; Gustin, Yves; Zeippen, Nicolas; Xavier, Samanta CC; Jansen, Ana M; Miles, Michael A; (2020) A lineage-specific rapid diagnostic test (Chagas Sero K-SeT) identifies Brazilian Trypanosoma cruzi II/V/VI reservoir hosts among diverse mammalian orders. PloS one, 15 (1). e0227828-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0227828

McClean, Mairi CW; Bhattacharyya, Tapan; Mertens, Pascal; Murphy, Niamh; Gilleman, Quentin; Gustin, Yves; Zeippen, Nicolas; Xavier, Samanta CC; Jansen, Ana M; Miles, Michael A; (2020) Correction: A lineage-specific rapid diagnostic test (Chagas Sero K-SeT) identifies Brazilian Trypanosoma cruzi II/V/VI reservoir hosts among diverse mammalian orders. PloS one, 15 (4). e0231566-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0231566

Molina-Gonzalez, Sandra J; Bhattacharyya, Tapan; AlShehri, Hajri R; Poulton, Kate; Allen, Stephen; Miles, Michael A; Arianitwe, Moses; Tukahebwa, Edridah M; Webster, Bonnie; Russell Stothard, J; +1 more... Bustinduy, Amaya L; (2020) Application of a recombinase polymerase amplification (RPA) assay and pilot field testing for Giardia duodenalis at Lake Albert, Uganda. Parasites and Vectors, 13 (1). 289-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-020-04168-1

Murphy, Niamh; Rooney, Barrie; Bhattacharyya, Tapan; Triana-Chavez, Omar; Krueger, Anja; Haslam, Stuart M; O'Rourke, Victoria; Pańczuk, Magdalena; Tsang, Jemima; Bickford-Smith, Jack; +5 more... Gilman, Robert H; Tetteh, Kevin; Drakeley, Chris; Smales, C Mark; Miles, Michael A; (2020) Glycosylation of Trypanosoma cruzi TcI antigen reveals recognition by chagasic sera. SCIENTIFIC REPORTS, 10 (1). 16395-. ISSN 2045-2322 DOI: https://doi.org/10.1038/s41598-020-73390-9

Van den Broeck, Frederik; Savill, Nicholas J; Imamura, Hideo; Sanders, Mandy; Maes, Ilse; Cooper, Sinclair; Mateus, David; Jara, Marlene; Adaui, Vanessa; Arevalo, Jorge; +8 more... Llanos-Cuentas, Alejandro; Garcia, Lineth; Cupolillo, Elisa; Miles, Michael; Berriman, Matthew; Schnaufer, Achim; Cotton, James A; Dujardin, Jean-Claude; (2020) Ecological divergence and hybridization of Neotropical Leishmania parasites. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 117 (40). pp. 25159-25168. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.1920136117

Vojtkova, Barbora; Spitzova, Tatiana; Votypka, Jan; Lestinova, Tereza; Kominkova, Iveta; Hajkova, Michaela; Santos-Mateus, David; Miles, Michael A; Volf, Petr; Sadlova, Jovana; (2020) Central Asian Rodents as Model Animals for Leishmania major and Leishmania donovani Research. MICROORGANISMS, 8 (9). p. 1440. ISSN 2076-2607 DOI: https://doi.org/10.3390/microorganisms8091440

Bhattacharyya, Tapan; Murphy, Niamh; Miles, Michael A; (2019) Trypanosoma cruzi lineage-specific serology: new rapid tests for resolving clinical and ecological associations. Future science OA, 5 (10). FSO422-. ISSN 2056-5623 DOI: https://doi.org/10.2144/fsoa-2019-0103

Bremer Hinckel, Bruno Cesar; Marlais, Tegwen; Airs, Stephanie; Bhattacharyya, Tapan; Imamura, Hideo; Dujardin, Jean-Claude; El-Safi, Sayda; Singh, Om Prakash; Sundar, Shyam; Falconar, Andrew Keith; +4 more... Andersson, Bjorn; Litvinov, Sergey; Miles, Michael A; Mertens, Pascal; (2019) Refining wet lab experiments with in silico searches: A rational quest for diagnostic peptides in visceral leishmaniasis. PLoS neglected tropical diseases, 13 (5). e0007353-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0007353

Collis, Sarah; El-Safi, Sayda; Atia, Atia A; Bhattacharyya, Tapan; Hammad, Awad; Den Boer, Margriet; Le, Hai; Whitworth, James A; Miles, Michael A; (2019) Epidemiological and molecular investigation of resurgent cutaneous leishmaniasis in Sudan. International journal of infectious diseases, 88. pp. 14-20. ISSN 1201-9712 DOI: https://doi.org/10.1016/j.ijid.2019.08.018

Grillet, Maria E; Hernández-Villena, Juan V; Llewellyn, Martin S; Paniz-Mondolfi, Alberto E; Tami, Adriana; Vincenti-Gonzalez, Maria F; Marquez, Marilianna; Mogollon-Mendoza, Adriana C; Hernandez-Pereira, Carlos E; Plaza-Morr, Juan D; +38 more... Blohm, Gabriella; Grijalva, Mario J; Costales, Jaime A; Ferguson, Heather M; Schwabl, Philipp; Hernandez-Castro, Luis E; Lamberton, Poppy HL; Streicker, Daniel G; Haydon, Daniel T; Miles, Michael A; Acosta-Serrano, Alvaro; Acquattela, Harry; Basañez, Maria G; Benaim, Gustavo; Colmenares, Luis A; Conn, Jan E; Espinoza, Raul; Freilij, Hector; Graterol-Gil, Mary C; Hotez, Peter J; Kato, Hirotomo; Lednicky, John A; Martinez, Clara E; Mas-Coma, Santiago; Morris, J Glen; Navarro, Juan C; Ramirez, Jose L; Rodriguez, Marlenes; Urbina, Julio A; Villegas, Leopoldo; Segovia, Maikell J; Carrasco, Hernan J; Crainey, James L; Luz, Sergio LB; Moreno, Juan D; Noya Gonzalez, Oscar O; Ramírez, Juan D; Alarcón-de Noya, Belkisyolé; (2019) Venezuela's humanitarian crisis, resurgence of vector-borne diseases, and implications for spillover in the region. LANCET INFECTIOUS DISEASES, 19 (5). e149-e161. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(18)30757-6

Marlais, T; (2019) Diagnostics development for the neglected parasitic diseases strongyloidiasis and visceral leishmaniasis. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04654991

Murphy, Niamh; Macchiaverna, Natalia P; Victoria Cardinal, M; Bhattacharyya, Tapan; Mertens, Pascal; Zeippen, Nicolas; Gustin, Yves; Gilleman, Quentin; Gürtler, Ricardo E; Miles, Michael A; (2019) Lineage-specific rapid diagnostic tests can resolve Trypanosoma cruzi TcII/V/VI ecological and epidemiological associations in the Argentine Chaco. Parasites & vectors, 12 (1). 424-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-019-3681-7

Paniz-Mondolfi, Alberto E; Tami, Adriana; Grillet, Maria E; Márquez, Marilianna; Hernández-Villena, Juan; Escalona-Rodríguez, María A; Blohm, Gabriela M; Mejías, Isis; Urbina-Medina, Huníades; Rísquez, Alejandro; +18 more... Castro, Julio; Carvajal, Ana; Walter, Carlos; López, María G; Schwabl, Philipp; Hernández-Castro, Luis; Miles, Michael A; Hotez, Peter J; Lednicky, John; Morris, J Glenn; Crainey, James; Luz, Sergio; Ramírez, Juan D; Sordillo, Emilia; Llewellyn, Martin; Canache, Merari; Araque, María; Oletta, José; (2019) Resurgence of Vaccine-Preventable Diseases in Venezuela as a Regional Public Health Threat in the Americas. Emerging infectious diseases, 25 (4). pp. 625-632. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2504.181305

Schwabl, Philipp; Imamura, Hideo; Van den Broeck, Frederik; Costales, Jaime A; Maiguashca-Sánchez, Jalil; Miles, Michael A; Andersson, Bjorn; Grijalva, Mario J; Llewellyn, Martin S; (2019) Meiotic sex in Chagas disease parasite Trypanosoma cruzi. NATURE COMMUNICATIONS, 10 (1). 3972-. ISSN 2041-1723 DOI: https://doi.org/10.1038/s41467-019-11771-z

Sima, Michal; Ferencova, Blanka; Bhattacharyya, Tapan; Miles, Michael A; Litvinov, Sergey V; Hailu, Asrat; Baneth, Gad; Volf, Petr; (2019) Synthetic peptides as a novel approach for detecting antibodies against sand fly saliva. PLOS NEGLECTED TROPICAL DISEASES, 13 (1). e0007078-. ISSN 1935-2735 DOI: https://doi.org/10.1371/journal.pntd.0007078

Bhattacharyya, Tapan; Messenger, Louisa A; Bern, Caryn; Mertens, Pascal; Gilleman, Quentin; Zeippen, Nicolas; Bremer Hinckel, Bruno C; Murphy, Niamh; Gilman, Robert H; Miles, Michael A; +1 more... Chagas Working Group in Bolivia and Peru; (2018) Severity of Chagasic Cardiomyopathy Is Associated With Response to a Novel Rapid Diagnostic Test for Trypanosoma cruzi TcII/V/VI. Clinical infectious diseases, 67 (4). pp. 519-524. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciy121

Marlais, Tegwen; Bhattacharyya, Tapan; Singh, Om Prakash; Mertens, Pascal; Gilleman, Quentin; Thunissen, Caroline; Hinckel, Bruno C Bremer; Pearson, Callum; Gardner, Bathsheba L; Airs, Stephanie; +13 more... de la Roche, Marianne; Hayes, Kiera; Hafezi, Hannah; Falconar, Andrew K; Eisa, Osama; Saad, Alfarazdeg; Khanal, Basudha; Bhattarai, Narayan Raj; Rijal, Suman; Boelaert, Marleen; El-Safi, Sayda; Sundar, Shyam; Miles, Michael A; (2018) Visceral Leishmaniasis IgG1 Rapid Monitoring of Cure vs. Relapse, and Potential for Diagnosis of Post Kala-Azar Dermal Leishmaniasis. Frontiers in Cellular and Infection Microbiology, 8. 427-. DOI: https://doi.org/10.3389/fcimb.2018.00427

Mollett, Guy; Bremer Hinckel, Bruno C; Bhattacharyya, Tapan; Marlais, Tegwen; Singh, Om Prakash; Mertens, Pascal; Falconar, Andrew K; El-Safi, Sayda; Sundar, Shyam; Miles, Michael A; (2018) Detection of Immunoglobulin G1 Against rK39 Improves Monitoring of Treatment Outcomes in Visceral Leishmaniasis. Clinical Infectious Diseases, 69 (7). pp. 1130-1135. ISSN 1058-4838 DOI: https://doi.org/10.1093/cid/ciy1062

Roman, Fabiola; das Chagas Xavier, Samanta; Messenger, Louisa A; Pavan, Márcio G; Miles, Michael A; Jansen, Ana María; Yeo, Matthew; (2018) Dissecting the phyloepidemiology of Trypanosoma cruzi I (TcI) in Brazil by the use of high resolution genetic markers. PLoS neglected tropical diseases, 12 (5). e0006466-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0006466

Torrellas, Annhymariet; Ferrer, Elizabeth; Cruz, Israel; Lima, Héctor de; Delgado, Olinda; Rangel, José Carrero; Bravo, José Arturo; Chicharro, Carmen; Llanes-Acevedo, Ivonne Pamela; Miles, Michael A; +1 more... Feliciangeli, María Dora; (2018) Molecular typing reveals the co-existence of two transmission cycles of American cutaneous leishmaniasis in the Andean Region of Venezuela with Lutzomyia migonei as the vector. Memorias do Instituto Oswaldo Cruz, 113 (12). e180323-. ISSN 1678-8060 DOI: https://doi.org/10.1590/0074-02760180323

Acosta, Nidia; López, Elsa; Lewis, Michael D; Llewellyn, Martin S; Gómez, Ana; Román, Fabiola; Miles, Michael A; Yeo, Matthew; (2017) Hosts and vectors of Trypanosoma cruzi discrete typing units in the Chagas disease endemic region of the Paraguayan Chaco. Parasitology, 144 (7). pp. 884-898. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182016002663

Bhattacharyya, Tapan; Marlais, Tegwen; Miles, Michael A; (2017) Diagnostic antigens for visceral leishmaniasis: clarification of nomenclatures. Parasites & vectors, 10 (1). 178-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-017-2120-x

Cameron, Mary M; Acosta-Serrano, Alvaro; Bern, Caryn; Boelaert, Marleen; den Boer, Margriet; Burza, Sakib; Chapman, Lloyd AC; Chaskopoulou, Alexandra; Coleman, Michael; Courtenay, Orin; +21 more... Croft, Simon; Das, Pradeep; Dilger, Erin; Foster, Geraldine; Garlapati, Rajesh; Haines, Lee; Harris, Angela; Hemingway, Janet; Hollingsworth, T Déirdre; Jervis, Sarah; Medley, Graham; Miles, Michael; Paine, Mark; Picado, Albert; Poché, Richard; Ready, Paul; Rogers, Matthew; Rowland, Mark; Sundar, Shyam; de Vlas, Sake J; Weetman, David; (2016) Understanding the transmission dynamics of Leishmania donovani to provide robust evidence for interventions to eliminate visceral leishmaniasis in Bihar, India. Parasites & vectors, 9 (1). 25-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-016-1309-8

Kerr, Charlotte L; Bhattacharyya, Tapan; Xavier, Samanta CC; Barros, Juliana H; Lima, Valdirene S; Jansen, Ana M; Miles, Michael A; (2016) Lineage-specific serology confirms Brazilian Atlantic forest lion tamarins, Leontopithecus chrysomelas and Leontopithecus rosalia, as reservoir hosts of Trypanosoma cruzi II (TcII). Parasites & vectors, 9 (1). 584-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-016-1873-y

Messenger, Louisa A; Ramirez, Juan David; Llewellyn, Martin S; Guhl, Felipe; Miles, Michael A; (2016) Importation of Hybrid Human-Associated Trypanosoma cruzi Strains of Southern South American Origin, Colombia. Emerging infectious diseases, 22 (8). pp. 1452-1455. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid2208.150786

Bhattacharyya, Tapan; (2015) Parasite diversity and innovative serology: development of Trypanosoma cruzi lineage‐specific diagnosis of Chagas disease and of prognostic assays for visceral leishmaniasis. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.02173663

Bhattacharyya, Tapan; Mills, Emily A; Jansen, Ana Maria; Miles, Michael A; (2015) Prospects for T. cruzi lineage-specific serological surveillance of wild mammals. Acta tropica, 151 (1). pp. 182-186. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2015.06.017 Full text not available from this repository.

Llewellyn, Martin S; Messenger, Louisa A; Luquetti, Alejandro O; Garcia, Lineth; Torrico, Faustino; Tavares, Suelene BN; Cheaib, Bachar; Derome, Nicolas; Delepine, Marc; Baulard, Céline; +3 more... Deleuze, Jean-Francois; Sauer, Sascha; Miles, Michael A; (2015) Deep sequencing of the Trypanosoma cruzi GP63 surface proteases reveals diversity and diversifying selection among chronic and congenital Chagas disease patients. PLoS neglected tropical diseases, 9 (4). e0003458-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003458

Messenger, LA; (2015) Genetic diversity in Trypanosoma cruzi: marker development and applications; natural population structures, and genetic exchange mechanisms. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.02197028

Messenger, LA; Yeo, M; Lewis, MD; Llewellyn, MS; Miles, MA; (2015) Molecular Genotyping of Trypanosoma cruzi for Lineage Assignment and Population Genetics. Methods in molecular biology (Clifton, NJ), 1201. pp. 297-337. ISSN 1064-3745 DOI: https://doi.org/10.1007/978-1-4939-1438-8_19 Full text not available from this repository.

Messenger, Louisa A; Garcia, Lineth; Vanhove, Mathieu; Huaranca, Carlos; Bustamante, Marinely; Torrico, Marycruz; Torrico, Faustino; Miles, Michael A; Llewellyn, Martin S; (2015) Ecological host fitting of Trypanosoma cruzi TcI in Bolivia: mosaic population structure, hybridization and a role for humans in Andean parasite dispersal. Molecular ecology, 24 (10). pp. 2406-2422. ISSN 0962-1083 DOI: https://doi.org/10.1111/mec.13186

Messenger, Louisa A; Miles, Michael A; (2015) Evidence and importance of genetic exchange among field populations of Trypanosoma cruzi. Acta tropica, 151 (1). pp. 150-155. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2015.05.007

Messenger, Louisa A; Miles, Michael A; Bern, Caryn; (2015) Between a bug and a hard place: Trypanosoma cruzi genetic diversity and the clinical outcomes of Chagas disease. Expert review of anti-infective therapy, 13 (8). pp. 995-1029. ISSN 1478-7210 DOI: https://doi.org/10.1586/14787210.2015.1056158

Messenger, Louisa A; Yeo, Matthew; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; (2015) Molecular genotyping of Trypanosoma cruzi for lineage assignment and population genetics. In: Peacock, C, (ed.) Parasite Genomics Protocols, Second Edition. UNSPECIFIED, pp. 297-337. ISBN 9781493914371 DOI: https://doi.org/10.1007/978-1-4939-1438-8_19 Full text not available from this repository.

Baleela, Rania; Llewellyn, Martin S; Fitzpatrick, Sinead; Kuhls, Katrin; Schönian, Gabriele; Miles, Michael A; Mauricio, Isabel L; (2014) Leishmania donovani populations in Eastern Sudan: temporal structuring and a link between human and canine transmission. Parasites & vectors, 7 (1). 496-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-014-0496-4

Bhattacharyya, Tapan; Ayandeh, Armon; Falconar, Andrew K; Sundar, Shyam; El-Safi, Sayda; Gripenberg, Marissa A; Bowes, Duncan E; Thunissen, Caroline; Singh, Om Prakash; Kumar, Rajiv; +7 more... Ahmed, Osman; Eisa, Osama; Saad, Alfarazdeg; Silva Pereira, Sara; Boelaert, Marleen; Mertens, Pascal; Miles, Michael A; (2014) IgG1 as a potential biomarker of post-chemotherapeutic relapse in visceral leishmaniasis, and adaptation to a rapid diagnostic test. PLoS neglected tropical diseases, 8 (10). e3273-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003273

Bhattacharyya, Tapan; Bowes, Duncan E; El-Safi, Sayda; Sundar, Shyam; Falconar, Andrew K; Singh, Om Prakash; Kumar, Rajiv; Ahmed, Osman; Boelaert, Marleen; Miles, Michael A; (2014) Significantly lower anti-Leishmania IgG responses in Sudanese versus Indian visceral leishmaniasis. PLoS neglected tropical diseases, 8 (2). e2675-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0002675

Bhattacharyya, Tapan; Falconar, Andrew K; Luquetti, Alejandro O; Costales, Jaime A; Grijalva, Mario J; Lewis, Michael D; Messenger, Louisa A; Tran, Trang T; Ramirez, Juan-David; Guhl, Felipe; +5 more... Carrasco, Hernan J; Diosque, Patricio; Garcia, Lineth; Litvinov, Sergey V; Miles, Michael A; (2014) Development of peptide-based lineage-specific serology for chronic Chagas disease: geographical and clinical distribution of epitope recognition. PLoS neglected tropical diseases, 8 (5). e2892-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0002892

Diosque, Patricio; Tomasini, Nicolás; Lauthier, Juan José; Messenger, Louisa Alexandra; Monje Rumi, María Mercedes; Ragone, Paula Gabriela; Alberti-D'Amato, Anahí Maitén; Pérez Brandán, Cecilia; Barnabé, Christian; Tibayrenc, Michel; +4 more... Lewis, Michael David; Llewellyn, Martin Stephen; Miles, Michael Alexander; Yeo, Matthew; (2014) Optimized multilocus sequence typing (MLST) scheme for Trypanosoma cruzi. PLoS neglected tropical diseases, 8 (8). e3117-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003117

Gelanew, Tesfaye; Hailu, Asrat; Schőnian, Gabriele; Lewis, Michael D; Miles, Michael A; Yeo, Matthew; (2014) Multilocus sequence and microsatellite identification of intra-specific hybrids and ancestor-like donors among natural Ethiopian isolates of Leishmania donovani. International journal for parasitology, 44 (10). pp. 751-757. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2014.05.008

Lewis, Michael D; Fortes Francisco, Amanda; Taylor, Martin C; Burrell-Saward, Hollie; McLatchie, Alex P; Miles, Michael A; Kelly, John M; (2014) Bioluminescence imaging of chronic Trypanosoma cruzi infections reveals tissue-specific parasite dynamics and heart disease in the absence of locally persistent infection. Cellular microbiology, 16 (9). pp. 1285-1300. ISSN 1462-5814 DOI: https://doi.org/10.1111/cmi.12297

Lima, Valdirene S; Jansen, Ana M; Messenger, Louisa A; Miles, Michael A; Llewellyn, Martin S; (2014) Wild Trypanosoma cruzi I genetic diversity in Brazil suggests admixture and disturbance in parasite populations from the Atlantic Forest region. Parasites & vectors, 7 (1). 263-. ISSN 1756-3305 DOI: https://doi.org/10.1186/1756-3305-7-263

Zingales, Bianca; Miles, Michael A; Moraes, Carolina B; Luquetti, Alejandro; Guhl, Felipe; Schijman, Alejandro G; Ribeiro, Isabela; Drugs for Neglected Disease Initiative; Chagas Clinical Research Platform Meeting; (2014) Drug discovery for Chagas disease should consider Trypanosoma cruzi strain diversity. Memorias do Instituto Oswaldo Cruz, 109 (6). pp. 828-833. ISSN 0074-0276 DOI: https://doi.org/10.1590/0074-0276140156

Becker, Sören L; Vogt, Jürg; Knopp, Stefanie; Panning, Marcus; Warhurst, David C; Polman, Katja; Marti, Hanspeter; von Müller, Lutz; Yansouni, Cedric P; Jacobs, Jan; +11 more... Bottieau, Emmanuel; Sacko, Moussa; Rijal, Suman; Meyanti, Fransiska; Miles, Michael A; Boelaert, Marleen; Lutumba, Pascal; van Lieshout, Lisette; N'Goran, Eliézer K; Chappuis, François; Utzinger, Jürg; (2013) Persistent digestive disorders in the tropics: causative infectious pathogens and reference diagnostic tests. BMC INFECTIOUS DISEASES, 13 (1). 37-. ISSN 1471-2334 DOI: https://doi.org/10.1186/1471-2334-13-37

Bhattacharyya, Tapan; Boelaert, Marleen; Miles, Michael A; (2013) Comparison of visceral leishmaniasis diagnostic antigens in African and Asian Leishmania donovani reveals extensive diversity and region-specific polymorphisms. PLoS neglected tropical diseases, 7 (2). e2057-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0002057

Kuhls, Katrin; Cupolillo, Elisa; Silva, Soraia O; Schweynoch, Carola; Boité, Mariana Côrtes; Mello, Maria N; Mauricio, Isabel; Miles, Michael; Wirth, Thierry; Schönian, Gabriele; (2013) Population structure and evidence for both clonality and recombination among Brazilian strains of the subgenus Leishmania (Viannia). PLOS NEGLECTED TROPICAL DISEASES, 7 (10). e2490-. ISSN 1935-2735 DOI: https://doi.org/10.1371/journal.pntd.0002490

Ruoti, Mónica; Oddone, Rolando; Lampert, Nathalie; Orué, Elizabeth; Miles, Michael A; Alexander, Neal; Rehman, Andrea M; Njord, Rebecca; Shu, Stephanie; Brice, Susannah; +2 more... Sinclair, Bryony; Krentel, Alison; (2013) Mucocutaneous leishmaniasis: knowledge, attitudes, and practices among paraguayan communities, patients, and health professionals. Journal of tropical medicine, 2013. 538629-. ISSN 1687-9686 DOI: https://doi.org/10.1155/2013/538629

Segovia, Maikell; Carrasco, Hernán J; Martínez, Clara E; Messenger, Louisa A; Nessi, Anaibeth; Londoño, Juan C; Espinosa, Raul; Martínez, Cinda; Alfredo, Mijares; Bonfante-Cabarcas, Rafael; +4 more... Lewis, Michael D; de Noya, Belkisyolé A; Miles, Michael A; Llewellyn, Martin S; (2013) Molecular epidemiologic source tracking of orally transmitted Chagas disease, Venezuela. Emerging infectious diseases, 19 (7). pp. 1098-1101. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid1907.121576

Yansouni, Cedric P; Bottieau, Emmanuel; Lutumba, Pascal; Winkler, Andrea S; Lynen, Lut; Büscher, Philippe; Jacobs, Jan; Gillet, Philippe; Lejon, Veerle; Alirol, Emilie; +7 more... Polman, Katja; Utzinger, Jürg; Miles, Michael A; Peeling, Rosanna W; Muyembe, Jean-Jacques; Chappuis, François; Boelaert, Marleen; (2013) Rapid diagnostic tests for neurological infections in central Africa. The Lancet infectious diseases, 13 (6). pp. 546-558. ISSN 1473-3099 DOI: https://doi.org/10.1016/S1473-3099(13)70004-5 Full text not available from this repository.

Boité, Mariana C; Mauricio, Isabel L; Miles, Michael A; Cupolillo, Elisa; (2012) New insights on taxonomy, phylogeny and population genetics of Leishmania (Viannia) parasites based on multilocus sequence analysis. PLOS NEGLECTED TROPICAL DISEASES, 6 (11). e1888-. ISSN 1935-2735 DOI: https://doi.org/10.1371/journal.pntd.0001888

Carrasco, Hernán J; Segovia, Maikell; Llewellyn, Martin S; Morocoima, Antonio; Urdaneta-Morales, Servio; Martínez, Cinda; Martínez, Clara E; Garcia, Carlos; Rodríguez, Marlenes; Espinosa, Raul; +7 more... de Noya, Belkisyolé A; Díaz-Bello, Zoraida; Herrera, Leidi; Fitzpatrick, Sinead; Yeo, Matthew; Miles, Michael A; Feliciangeli, M Dora; (2012) Geographical distribution of Trypanosoma cruzi genotypes in Venezuela. PLOS NEGLECTED TROPICAL DISEASES, 6 (6). e1707-. ISSN 1935-2735 DOI: https://doi.org/10.1371/journal.pntd.0001707

Franzén, Oscar; Talavera-López, Carlos; Ochaya, Stephen; Butler, Claire E; Messenger, Louisa A; Lewis, Michael D; Llewellyn, Martin S; Marinkelle, Cornelis J; Tyler, Kevin M; Miles, Michael A; +1 more... Andersson, Björn; (2012) Comparative genomic analysis of human infective Trypanosoma cruzi lineages with the bat-restricted subspecies T. cruzi marinkellei. BMC genomics, 13 (1). 531-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-531

Lauthier, Juan J; Tomasini, Nicolás; Barnabé, Christian; Rumi, María M Monje; D'Amato, Anahí M Alberti; Ragone, Paula G; Yeo, Matthew; Lewis, Michael D; Llewellyn, Martin S; Basombrío, Miguel A; +3 more... Miles, Michael A; Tibayrenc, Michel; Diosque, Patricio; (2012) Candidate targets for Multilocus Sequence Typing of Trypanosoma cruzi: validation using parasite stocks from the Chaco Region and a set of reference strains. Infection, genetics and evolution, 12 (2). pp. 350-358. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.12.008 Full text not available from this repository.

Messenger, Louisa A; Llewellyn, Martin S; Bhattacharyya, Tapan; Franzén, Oscar; Lewis, Michael D; Ramírez, Juan David; Carrasco, Hernan J; Andersson, Björn; Miles, Michael A; (2012) Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing. PLoS neglected tropical diseases, 6 (4). e1584-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001584

Ramírez, Juan David; Guhl, Felipe; Messenger, Louisa A; Lewis, Michael D; Montilla, Marleny; Cucunuba, Zulma; Miles, Michael A; Llewellyn, Martin S; (2012) Contemporary cryptic sexuality in Trypanosoma cruzi. Molecular ecology, 21 (17). pp. 4216-4226. ISSN 0962-1083 DOI: https://doi.org/10.1111/j.1365-294X.2012.05699.x

Zingales, Bianca; Miles, Michael A; Campbell, David A; Tibayrenc, Michel; Macedo, Andrea M; Teixeira, Marta MG; Schijman, Alejandro G; Llewellyn, Martin S; Lages-Silva, Eliane; Machado, Carlos R; +2 more... Andrade, Sonia G; Sturm, Nancy R; (2012) The revised Trypanosoma cruzi subspecific nomenclature: rationale, epidemiological relevance and research applications. Infection, genetics and evolution, 12 (2). pp. 240-253. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.12.009 Full text not available from this repository.

Zumaya-Estrada, Federico A; Messenger, Louisa A; Lopez-Ordonez, Teresa; Lewis, Michael D; Flores-Lopez, Carlos A; Martínez-Ibarra, Alejandro J; Pennington, Pamela M; Cordon-Rosales, Celia; Carrasco, Hernan V; Segovia, Maikel; +2 more... Miles, Michael A; Llewellyn, Martin S; (2012) North American import? Charting the origins of an enigmatic Trypanosoma cruzi domestic genotype. Parasites & vectors, 5 (1). 226-. ISSN 1756-3305 DOI: https://doi.org/10.1186/1756-3305-5-226

Bhattacharyya, T; Franzen, O; Falconar, A; Baleela, R; Mauricio, I; Yeo, M; Luquetti, A; Andersson, B; Carlier, Y; Miles, M; (2011) Genetic diversity and diagnostics development for trypanosomatid protozoa. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/18515 Full text not available from this repository.

Franzén, Oscar; Ochaya, Stephen; Sherwood, Ellen; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; Andersson, Björn; (2011) Shotgun sequencing analysis of Trypanosoma cruzi I Sylvio X10/1 and comparison with T. cruzi VI CL Brener. PLoS neglected tropical diseases, 5 (3). e984-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000984

Hamilton, PB; Lewis, MD; Cruickshank, C; Gaunt, MW; Yeo, M; Llewellyn, MS; Valente, SA; Maia da Silva, F; Stevens, JR; Miles, MA; +1 more... Teixeira, MMG; (2011) Identification and lineage genotyping of South American trypanosomes using fluorescent fragment length barcoding. Infection, genetics and evolution, 11 (1). pp. 44-51. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2010.10.012 Full text not available from this repository.

Kuhls, Katrin; Alam, Mohammad Zahangir; Cupolillo, Elisa; Ferreira, Gabriel Eduardo M; Mauricio, Isabel L; Oddone, Rolando; Feliciangeli, M Dora; Wirth, Thierry; Miles, Michael A; Schönian, Gabriele; (2011) Comparative microsatellite typing of new world leishmania infantum reveals low heterogeneity among populations and its recent old world origin. PLoS neglected tropical diseases, 5 (6). e1155-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001155

Lewis, Michael D; Llewellyn, Martin S; Yeo, Matthew; Acosta, Nidia; Gaunt, Michael W; Miles, Michael A; (2011) Recent, independent and anthropogenic origins of Trypanosoma cruzi hybrids. PLoS neglected tropical diseases, 5 (10). e1363-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001363

Llewellyn, Martin S; Rivett-Carnac, John B; Fitzpatrick, Sinead; Lewis, Michael D; Yeo, Matthew; Gaunt, Michael W; Miles, Michael A; (2011) Extraordinary Trypanosoma cruzi diversity within single mammalian reservoir hosts implies a mechanism of diversifying selection. International journal for parasitology, 41 (6). pp. 609-614. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2010.12.004

Sadlova, Jovana; Yeo, Matthew; Seblova, Veronika; Lewis, Michael D; Mauricio, Isabel; Volf, Petr; Miles, Michael A; (2011) Visualisation of Leishmania donovani fluorescent hybrids during early stage development in the sand fly vector. PloS one, 6 (5). e19851-. ISSN 1932-6203 DOI: https://doi.org/10.1371/journal.pone.0019851

Yeo, Matthew; Mauricio, Isabel L; Messenger, Louisa A; Lewis, Michael D; Llewellyn, Martin S; Acosta, Nidia; Bhattacharyya, Tapan; Diosque, Patricio; Carrasco, Hernan J; Miles, Michael A; (2011) Multilocus sequence typing (MLST) for lineage assignment and high resolution diversity studies in Trypanosoma cruzi. PLoS neglected tropical diseases, 5 (6). e1049-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001049

Abad-Franch, Fernando; Ferraz, Gonçalo; Campos, Ciro; Palomeque, Francisco S; Grijalva, Mario J; Aguilar, H Marcelo; Miles, Michael A; (2010) Modeling disease vector occurrence when detection is imperfect: infestation of Amazonian palm trees by triatomine bugs at three spatial scales. PLoS neglected tropical diseases, 4 (3). e620-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000620

Bhattacharyya, Tapan; Brooks, Jessica; Yeo, Matthew; Carrasco, Hernan J; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; (2010) Analysis of molecular diversity of the Trypanosoma cruzi trypomastigote small surface antigen reveals novel epitopes, evidence of positive selection and potential implications for lineage-specific serology. International journal for parasitology, 40 (8). pp. 921-928. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2010.01.002 Full text not available from this repository.

Miles, Michael A; (2010) Orally acquired Chagas disease: lessons from an urban school outbreak. The Journal of infectious diseases, 201 (9). pp. 1282-1284. ISSN 0022-1899 DOI: https://doi.org/10.1086/651609 Full text not available from this repository.

Ocaña-Mayorga, Sofía; Llewellyn, Martin S; Costales, Jaime A; Miles, Michael A; Grijalva, Mario J; (2010) Sex, subdivision, and domestic dispersal of Trypanosoma cruzi lineage I in southern Ecuador. PLoS neglected tropical diseases, 4 (12). e915-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000915

Lewis, Michael D; Llewellyn, Martin S; Gaunt, Michael W; Yeo, Matthew; Carrasco, Hernán J; Miles, Michael A; (2009) Flow cytometric analysis and microsatellite genotyping reveal extensive DNA content variation in Trypanosoma cruzi populations and expose contrasts between natural and experimental hybrids. International journal for parasitology, 39 (12). pp. 1305-1317. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2009.04.001

Lewis, Michael D; Ma, Jonathan; Yeo, Matthew; Carrasco, Hernán J; Llewellyn, Martin S; Miles, Michael A; (2009) Genotyping of Trypanosoma cruzi: systematic selection of assays allowing rapid and accurate discrimination of all known lineages. The American journal of tropical medicine and hygiene, 81 (6). pp. 1041-1049. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.2009.09-0305

Llewellyn, Martin S; Lewis, Michael D; Acosta, Nidia; Yeo, Matthew; Carrasco, Hernan J; Segovia, Maikell; Vargas, Jorge; Torrico, Faustino; Miles, Michael A; Gaunt, Michael W; (2009) Trypanosoma cruzi IIc: phylogenetic and phylogeographic insights from sequence and microsatellite analysis and potential impact on emergent Chagas disease. PLoS neglected tropical diseases, 3 (9). e510-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000510

Llewellyn, Martin S; Miles, Michael A; Carrasco, Hernan J; Lewis, Michael D; Yeo, Matthew; Vargas, Jorge; Torrico, Faustino; Diosque, Patricio; Valente, Vera; Valente, Sebastiao A; +1 more... Gaunt, Michael W; (2009) Genome-scale multilocus microsatellite typing of Trypanosoma cruzi discrete typing unit I reveals phylogeographic structure and specific genotypes linked to human infection. PLoS pathogens, 5 (5). e1000410-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1000410

Marcili, Arlei; Lima, Luciana; Valente, Vera C; Valente, Sebastião A; Batista, Jael S; Junqueira, Angela CV; Souza, Alda I; da Rosa, João A; Campaner, Marta; Lewis, Michael D; +3 more... Llewellyn, Martin S; Miles, Michael A; Teixeira, Marta MG; (2009) Comparative phylogeography of Trypanosoma cruzi TCIIc: new hosts, association with terrestrial ecotopes, and spatial clustering. Infection, genetics and evolution, 9 (6). pp. 1265-1274. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2009.07.003 Full text not available from this repository.

Marcili, Arlei; Valente, Vera C; Valente, Sebastião A; Junqueira, Angela CV; da Silva, Flávia Maia; Pinto, Ana Yecê das Neves; Naiff, Roberto D; Campaner, Marta; Coura, José R; Camargo, Erney P; +2 more... Miles, Michael A; Teixeira, Marta MG; (2009) Trypanosoma cruzi in Brazilian Amazonia: Lineages TCI and TCIIa in wild primates, Rhodnius spp. and in humans with Chagas disease associated with oral transmission. International journal for parasitology, 39 (5). pp. 615-623. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2008.09.015 Full text not available from this repository.

Miles, MA; Llewellyn, MS; Lewis, MD; Yeo, M; Baleela, R; Fitzpatrick, S; Gaunt, MW; Mauricio, IL; (2009) The molecular epidemiology and phylogeography of Trypanosoma cruzi and parallel research on Leishmania: looking back and to the future. Parasitology, 136 (12). pp. 1509-1528. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182009990977

Miles, Michael A; Yeo, Matthew; Mauricio, Isabel L; (2009) Genetics. Leishmania exploit sex. Science (New York, NY), 324 (5924). pp. 187-189. ISSN 0036-8075 DOI: https://doi.org/10.1126/science.1172789 Full text not available from this repository.

Zingales, B; Andrade, SG; Briones, MRS; Campbell, DA; Chiari, E; Fernandes, O; Guhl, F; Lages-Silva, E; Macedo, AM; Machado, CR; +6 more... Miles, MA; Romanha, AJ; Sturm, NR; Tibayrenc, M; Schijman, AG; Second Satellite Meeting; (2009) A new consensus for Trypanosoma cruzi intraspecific nomenclature: second revision meeting recommends TcI to TcVI. Memorias do Instituto Oswaldo Cruz, 104 (7). pp. 1051-1054. ISSN 0074-0276 DOI: https://doi.org/10.1590/s0074-02762009000700021

Abad-Franch, F; Ferraz, G; Campos, C; Palomeque, FS; Grijalva, MJ; Aguilar, HM; Miles, MA; (2008) Cross-Scale Patterns of Palm Tree Infestation by Triatomine Bugs (Heteroptera: Triatominae) in Amazonia. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/5793 Full text not available from this repository.

Fitzpatrick, S; Watts, PC; Feliciangeli, MD; Miles, MA; Kemp, SJ; (2008) A panel of ten microsatellite loci for the Chagas disease vector Rhodnius prolixus (Hemiptera: Reduviidae). Infection, genetics and evolution, 9 (2). pp. 206-209. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2008.10.017

Fitzpatrick, Sinead; Feliciangeli, Maria Dora; Sanchez-Martin, Maria J; Monteiro, Fernando A; Miles, Michael A; (2008) Molecular genetics reveal that silvatic Rhodnius prolixus do colonise rural houses. PLoS neglected tropical diseases, 2 (4). e210-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000210

Kuhls, Katrin; Chicharro, Carmen; Cañavate, Carmen; Cortes, Sofia; Campino, Lenea; Haralambous, Christos; Soteriadou, Ketty; Pratlong, Francine; Dedet, Jean-Pierre; Mauricio, Isabel; +5 more... Miles, Michael; Schaar, Matthias; Ochsenreither, Sebastian; Radtke, Oliver A; Schönian, Gabriele; (2008) Differentiation and gene flow among European populations of Leishmania infantum MON-1. PLoS neglected tropical diseases, 2 (7). e261-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000261

Maia da Silva, F; Naiff, RD; Marcili, A; Gordo, M; D'Affonseca Neto, JA; Naiff, MF; Franco, AMR; Campaner, M; Valente, V; Valente, SA; +3 more... Camargo, EP; Teixeira, MMG; Miles, MA; (2008) Infection rates and genotypes of Trypanosoma rangeli and T. cruzi infecting free-ranging Saguinus bicolor (Callitrichidae), a critically endangered primate of the Amazon Rainforest. Acta tropica, 107 (2). pp. 168-173. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2008.05.015 Full text not available from this repository.

Cortes, S; Mauricio, I; Cristovao, JM; Miles, M; Campino, L; (2007) Evaluation of the Biological Behaviour of Parental and Hybrid Strains of Leishmania subgenus viannia: In vitro fitness. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/6117 Full text not available from this repository.

Fitzpatrick, Sinead Orla; (2007) The analysis of the relationship between domestic and silvatic populations of Rhodnius prolixus\robustus (Hemiptera : Reduviidae) in Venezuela by geometric morphometric and molecular methods. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682357

Lukes, Julius; Mauricio, Isabel L; Schönian, Gabriele; Dujardin, Jean-Claude; Soteriadou, Ketty; Dedet, Jean-Pierre; Kuhls, Katrin; Tintaya, K Wilber Quispe; Jirků, Milan; Chocholová, Eva; +6 more... Haralambous, Christos; Pratlong, Francine; Oborník, Miroslav; Horák, Ales; Ayala, Francisco J; Miles, Michael A; (2007) Evolutionary and geographical history of the Leishmania donovani complex with a revision of current taxonomy. Proceedings of the National Academy of Sciences of the United States of America, 104 (22). pp. 9375-9380. ISSN 0027-8424 DOI: https://doi.org/10.1073/pnas.0703678104 Full text not available from this repository.

Nolder, Debbie; Roncal, Norma; Davies, Clive R; Llanos-Cuentas, Alejandro; Miles, Michael A; (2007) Multiple hybrid genotypes of Leishmania (viannia) in a focus of mucocutaneous Leishmaniasis. The American journal of tropical medicine and hygiene, 76 (3). pp. 573-578. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.2007.76.573

Patterson, James Simon; (2007) Comparative morphometric and molecular genetic analyses of triatominae (Hemiptera : Reduviidae). PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682370

Zemanová, Eva; Jirků, Milan; Mauricio, Isabel L; Horák, Ales; Miles, Michael A; Lukes, Julius; (2007) The Leishmania donovani complex: genotypes of five metabolic enzymes (ICD, ME, MPI, G6PDH, and FH), new targets for multilocus sequence typing. International journal for parasitology, 37 (2). pp. 149-160. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2006.08.008 Full text not available from this repository.

Mauricio, Isabel L; Gaunt, Michael W; Stothard, J Russell; Miles, Michael A; (2006) Glycoprotein 63 (gp63) genes show gene conversion and reveal the evolution of Old World Leishmania. International journal for parasitology, 37 (5). pp. 565-576. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2006.11.020 Full text not available from this repository.

Mauricio, Isabel L; Yeo, Matthew; Baghaei, Mehdi; Doto, Daniela; Pratlong, Francine; Zemanova, Eva; Dedet, Jean-Pierre; Lukes, Julius; Miles, Michael A; (2006) Towards multilocus sequence typing of the Leishmania donovani complex: resolving genotypes and haplotypes for five polymorphic metabolic enzymes (ASAT, GPI, NH1, NH2, PGD). International journal for parasitology, 36 (7). pp. 757-769. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2006.03.006 Full text not available from this repository.

Yeo, Matthew; Lewis, Michael D; Carrasco, Hernan J; Acosta, Nidia; Llewellyn, Martin; da Silva Valente, Sebastião Aldo; de Costa Valente, Vera; de Arias, Antonieta Rojas; Miles, Michael A; (2006) Resolution of multiclonal infections of Trypanosoma cruzi from naturally infected triatomine bugs and from experimentally infected mice by direct plating on a sensitive solid medium. International journal for parasitology, 37 (1). pp. 111-120. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2006.08.002 Full text not available from this repository.

Abad-Franch, F; Palomeque, FS; Aguilar, HM; Miles, MA; (2005) Field ecology of sylvatic Rhodnius populations (Heteroptera, Triatominae): risk factors for palm tree infestation in western Ecuador. Tropical medicine & international health, 10 (12). pp. 1258-1266. ISSN 1360-2276 DOI: https://doi.org/10.1111/j.1365-3156.2005.01511.x Full text not available from this repository.

Parvizi, P; Mauricio, I; Aransay, AM; Miles, MA; Ready, PD; (2005) First detection of Leishmania major in peridomestic Phlebotomus papatasi from Isfahan province, Iran: comparison of nested PCR of nuclear ITS ribosomal DNA and semi-nested PCR of minicircle kinetoplast DNA. Acta tropica, 93 (1). pp. 75-83. ISSN 0001-706X DOI: https://doi.org/10.1016/j.actatropica.2004.09.007 Full text not available from this repository.

Yeo, Matthew; Acosta, Nidia; Llewellyn, Martin; Sánchez, Humberto; Adamson, Susie; Miles, Graham AJ; López, Elsa; González, Nilsa; Patterson, James S; Gaunt, Michael W; +2 more... de Arias, Antonieta Rojas; Miles, Michael A; (2005) Origins of Chagas disease: Didelphis species are natural hosts of Trypanosoma cruzi I and armadillos hosts of Trypanosoma cruzi II, including hybrids. International journal for parasitology, 35 (2). pp. 225-233. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2004.10.024 Full text not available from this repository.

Mauricio, IL; Stothard, JR; Miles, MA; (2004) Leishmania donovani complex: genotyping with the ribosomal internal transcribed spacer and the mini-exon. Parasitology, 128 (Pt 3). pp. 263-267. ISSN 0031-1820 DOI: https://doi.org/10.1017/s0031182003004578

Miles, Michael A; (2004) The discovery of Chagas disease: progress and prejudice. Infectious disease clinics of North America, 18 (2). pp. 247-260. ISSN 0891-5520 DOI: https://doi.org/10.1016/j.idc.2004.01.005 Full text not available from this repository.

Yeo, Matthew; (2004) The genetic diversity of trypanosoma cruzi, multiclonality of natural populations and the characterisation of Paraguayan isolates and experimentally derived T. cruzi I. hydrids. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682311

Zemanová, Eva; Jirků, Milan; Mauricio, Isabel L; Miles, Michael A; Lukes, Julius; (2004) Genetic polymorphism within the leishmania donovani complex: correlation with geographic origin. The American journal of tropical medicine and hygiene, 70 (6). pp. 613-617. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.2004.70.613

Abad-Franch, Fernando; (2003) The ecology and genetics of Chagas disease vectors in Ecuador, with emphasis on Rhodnius ecuadoriensis (Hemiptera : Reduviidae : Triatominae). PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682307

Gaunt, Michael W; Yeo, Matthew; Frame, Iain A; Stothard, J Russell; Carrasco, Hernan J; Taylor, Martin C; Mena, Susana Solis; Veazey, Paul; Miles, Graham AJ; Acosta, Nidia; +2 more... de Arias, Antonieta Rojas; Miles, Michael A; (2003) Mechanism of genetic exchange in American trypanosomes. Nature, 421 (6926). pp. 936-939. ISSN 0028-0836 DOI: https://doi.org/10.1038/nature01438 Full text not available from this repository.

Miles, MA; (2003) American Trypanosomiasis (Chagas Disease). In: Cook, GC; Zumla, AI, (eds.) Manson's Tropical Diseases. W.B. Saunders, Edinburgh, pp. 1325-1337. https://researchonline.lshtm.ac.uk/id/eprint/15792 Full text not available from this repository.

Miles, MA; (2003) American trypanosomiasis. In: Warrell, D; Cox, TM; Firth, JD; Benz, EJ, (eds.) Oxford Textbook of Medicine (4th Edn). Oxford University Press, Oxford, 07.13.11.00. https://researchonline.lshtm.ac.uk/id/eprint/17762 Full text not available from this repository.

Miles, Michael A; (2003) Malaria--there could be a third way. Nature, 421 (6918). 13-. ISSN 0028-0836 DOI: https://doi.org/10.1038/421013b Full text not available from this repository.

Miles, Michael A; Feliciangeli, M Dora; de Arias, Antonieta Rojas; (2003) American trypanosomiasis (Chagas' disease) and the role of molecular epidemiology in guiding control strategies. BMJ (Clinical research ed), 326 (7404). pp. 1444-1448. ISSN 0959-8138 DOI: https://doi.org/10.1136/bmj.326.7404.1444

Coura, José Rodrigues; Junqueira, Angela CV; Fernandes, Octavio; Valente, Sebastiao AS; Miles, Michael A; (2002) Emerging Chagas disease in Amazonian Brazil. Trends in parasitology, 18 (4). pp. 171-176. ISSN 1471-4922 DOI: https://doi.org/10.1016/s1471-4922(01)02200-0 Full text not available from this repository.

Cuba, César A Cuba; Abad-Franch, Fernando; Roldan Rodriguez, Judith; Vargas Vasquez, Franklin; Pollack Velasquez, Luis; Miles, Michael A; (2002) The triatomines of northern Peru, with emphasis on the ecology and infection by trypanosomes of Rhodnius ecuadoriensis (Triatominae). Memorias do Instituto Oswaldo Cruz, 97 (2). pp. 175-183. ISSN 0074-0276 DOI: https://doi.org/10.1590/s0074-02762002000200005

Galvão, C; Patterson, JS; Da Silva Rocha, D; Jurberg, J; Carcavallo, R; Rajen, K; Ambrose, DP; Miles, MA; (2002) A new species of Triatominae from Tamil Nadu, India. Medical and veterinary entomology, 16 (1). pp. 75-82. ISSN 0269-283X DOI: https://doi.org/10.1046/j.0269-283x.2002.00351.x Full text not available from this repository.

Gaunt, Michael W; Miles, Michael A; (2002) An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks. Molecular biology and evolution, 19 (5). pp. 748-761. ISSN 0737-4038 DOI: https://doi.org/10.1093/oxfordjournals.molbev.a004133 Full text not available from this repository.

Marcilla, A; Bargues, MD; Abad-Franch, F; Panzera, F; Carcavallo, RU; Noireau, F; Galvão, C; Jurberg, J; Miles, MA; Dujardin, JP; +1 more... Mas-Coma, S; (2002) Nuclear rDNA ITS-2 sequences reveal polyphyly of Panstrongylus species (Hemiptera: Reduviidae: Triatominae), vectors of Trypanosoma cruzi. Infection, genetics and evolution, 1 (3). pp. 225-235. ISSN 1567-1348 DOI: https://doi.org/10.1016/s1567-1348(02)00029-1 Full text not available from this repository.

Oddone, R; Canese, A; Jamjoon, M; Nolder, D; Miles, MA; Noyes, H; (2002) Genetic diversity among Paraguayan isolates of Leishmania braziliensis: Society Meeting at Manson House, London, 13 December 2001: Research in progress: short presentation [Poster Presentation]. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/17759 Full text not available from this repository.

Patterson, JS; Abad-Franch, F; Marcelo Aguilar V., H; Cuba Cuba, C; Miles, MA; (2002) Morphometrics of Rhodnius ecuadoriensis (Triatominae) popluations: a tool for Chagas disease vector control surveillance in Ecuador and Peru: Society Meeting at Manson House, London, 13 December 2001: Research in progress: short presentation [Poster Presentation]. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/17760 Full text not available from this repository.

Wilkinson, Shane R; Meyer, David J; Taylor, Martin C; Bromley, Elizabeth V; Miles, Michael A; Kelly, John M; (2002) The Trypanosoma cruzi enzyme TcGPXI is a glycosomal peroxidase and can be linked to trypanothione reduction by glutathione or tryparedoxin. The Journal of biological chemistry, 277 (19). pp. 17062-17071. ISSN 0021-9258 DOI: https://doi.org/10.1074/jbc.M111126200 Full text not available from this repository.

Yeo, M; Gaunt, MW; Miles, G; Miles, MA; (2002) Trypanosoma cruzi: multiclonality, genetic diversity, and experimental proof of genetic hybridization: Society Meeting at Manson House, London, 13 December 2001: Research in progress: short presentation [Poster Presentation]. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/17761 Full text not available from this repository.

Abad-Franch, F; Paucar, A; Carpio, C; Cuba, CA; Aguilar, HM; Miles, MA; (2001) Biogeography of Triatominae (Hemiptera: Reduviidae) in Ecuador: implications for the design of control strategies. Memorias do Instituto Oswaldo Cruz, 96 (5). pp. 611-620. ISSN 0074-0276 DOI: https://doi.org/10.1590/s0074-02762001000500004

Armstrong, B; Coleman, M; Davies, C; Elbourne, D; Fletcher, A; Grundy, E; Haines, A; Hall, A; Kirkwood, B; Lamping, D; +3 more... Miles, M; Roberts, I; Sondorp, E; (2001) Plight of Afghan people must not be forgotten. BMJ (Clinical research ed), 323 (7315). 755-. ISSN 0959-8138 DOI: https://doi.org/10.1136/bmj.323.7315.755

Cuba Cuba, CA; Ogunkolade, W; Howard, MK; Miles, MA; (2001) Immunological selection for Leishmania (Viannia) braziliensis antigens. Annals of tropical medicine and parasitology, 95 (5). pp. 473-483. ISSN 0003-4983 DOI: https://doi.org/10.1080/00034980120076226 Full text not available from this repository.

El Tai, NO; El Fari, M; Mauricio, I; Miles, MA; Oskam, L; El Safi, SH; Presber, WH; Schönian, G; (2001) Leishmania donovani: intraspecific polymorphisms of Sudanese isolates revealed by PCR-based analyses and DNA sequencing. Experimental parasitology, 97 (1). pp. 35-44. ISSN 0014-4894 DOI: https://doi.org/10.1006/expr.2001.4592 Full text not available from this repository.

Elnaiem, DA; Hassan, MM; Maingon, R; Nureldin, GH; Mekawi, AM; Miles, M; Ward, RD; (2001) The Egyptian mongoose, Herpestes ichneumon, is a possible reservoir host of visceral leishmaniasis in eastern Sudan. Parasitology, 122 (Pt 5). pp. 531-536. ISSN 0031-1820 DOI: https://doi.org/10.1017/s0031182001007594

Kelly, JM; Quack, G; Miles, MM; (2001) In vitro and in vivo activities of aminoadamantane and aminoalkylcyclohexane derivatives against Trypanosoma brucei. Antimicrobial agents and chemotherapy, 45 (5). pp. 1360-1366. ISSN 0066-4804 DOI: https://doi.org/10.1128/AAC.45.5.1360-1366.2001 Full text not available from this repository.

Mauricio, IL; Gaunt, MW; Stothard, JR; Miles, MA; (2001) Genetic typing and phylogeny of the Leishmania donovani complex by restriction analysis of PCR amplified gp63 intergenic regions. Parasitology, 122 (Pt 4). pp. 393-403. ISSN 0031-1820 DOI: https://doi.org/10.1017/s0031182001007466

Patterson, JS; Rajen, K; Ambrose, DP; Miles, MA; (2001) First record of trypanosomes from the endemic Indian genus of Triatominae, Linshcosteus sp. nov.: Society Meeting at Manson House, London, 7 December 2000: Research in progress: short presentation. [Conference or Workshop Item] https://researchonline.lshtm.ac.uk/id/eprint/17758 Full text not available from this repository.

Patterson, JS; Schofield, CJ; Dujardin, JP; Miles, MA; (2001) Population morphometric analysis of the tropicopolitan bug Triatoma rubrofasciata and relationships with old world species of Triatoma: evidence of New World ancestry. Medical and veterinary entomology, 15 (4). pp. 443-451. ISSN 0269-283X DOI: https://doi.org/10.1046/j.0269-283x.2001.00333.x Full text not available from this repository.

Póvoa, M; Wirtz, R; Lacerda, R; Miles, M; Warhurst, D; (2001) Malaria vectors in the municipality of Serra do Navio, State of Amapá, Amazon Region, Brazil. Memorias do Instituto Oswaldo Cruz, 96 (2). pp. 179-184. ISSN 0074-0276 DOI: https://doi.org/10.1590/s0074-02762001000200008

Mauricio, Isabel Larguinho; (2000) Genetic diversity in the Leishmania donovani complex. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682281

Aguirre-Beltran, Aura Georgina; (1999) Standardisation and evaluation of differential diagnostic systems for the detection of Entamoeba histolytica and Entamoeba dispar. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682278

Vexenat, Julio Alejandro; (1998) The epidemiology of visceral leishmaniasis in Teresina, Piaui State, Brazil, with special emphasis on diagnosis and transmissibility of canine infection. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00768480

Povoa, Marinete Marins; (1993) Studies on malaria in Serra do Navioegion, Amapa State, Brazil. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.00682226