Costales, Jaime A; Kotton, Camille N; Zurita-Leal, Andrea C; Garcia-Perez, Josselyn; Llewellyn, Martin S; Messenger, Louisa A; Bhattacharyya, Tapan; Burleigh, Barbara A; (2015) Chagas disease reactivation in a heart transplant patient infected by domestic Trypanosoma cruzi discrete typing unit I (TcIDOM). Parasites & vectors, 8 (1). 435-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-015-1039-3

Llewellyn, Martin S; Messenger, Louisa A; Luquetti, Alejandro O; Garcia, Lineth; Torrico, Faustino; Tavares, Suelene BN; Cheaib, Bachar; Derome, Nicolas; Delepine, Marc; Baulard, Céline; +3 more... Deleuze, Jean-Francois; Sauer, Sascha; Miles, Michael A; (2015) Deep sequencing of the Trypanosoma cruzi GP63 surface proteases reveals diversity and diversifying selection among chronic and congenital Chagas disease patients. PLoS neglected tropical diseases, 9 (4). e0003458-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0003458

Messenger, Louisa A; Yeo, Matthew; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; (2015) Molecular genotyping of Trypanosoma cruzi for lineage assignment and population genetics. In: Peacock, C, (ed.) Parasite Genomics Protocols, Second Edition. UNSPECIFIED, pp. 297-337. ISBN 9781493914371 DOI: https://doi.org/10.1007/978-1-4939-1438-8_19 Full text not available from this repository.

Baleela, Rania; Llewellyn, Martin S; Fitzpatrick, Sinead; Kuhls, Katrin; Schönian, Gabriele; Miles, Michael A; Mauricio, Isabel L; (2014) Leishmania donovani populations in Eastern Sudan: temporal structuring and a link between human and canine transmission. Parasites & vectors, 7 (1). 496-. ISSN 1756-3305 DOI: https://doi.org/10.1186/s13071-014-0496-4

Lima, Valdirene S; Jansen, Ana M; Messenger, Louisa A; Miles, Michael A; Llewellyn, Martin S; (2014) Wild Trypanosoma cruzi I genetic diversity in Brazil suggests admixture and disturbance in parasite populations from the Atlantic Forest region. Parasites & vectors, 7 (1). 263-. ISSN 1756-3305 DOI: https://doi.org/10.1186/1756-3305-7-263

Segovia, Maikell; Carrasco, Hernán J; Martínez, Clara E; Messenger, Louisa A; Nessi, Anaibeth; Londoño, Juan C; Espinosa, Raul; Martínez, Cinda; Alfredo, Mijares; Bonfante-Cabarcas, Rafael; +4 more... Lewis, Michael D; de Noya, Belkisyolé A; Miles, Michael A; Llewellyn, Martin S; (2013) Molecular epidemiologic source tracking of orally transmitted Chagas disease, Venezuela. Emerging infectious diseases, 19 (7). pp. 1098-1101. ISSN 1080-6040 DOI: https://doi.org/10.3201/eid1907.121576

Franzén, Oscar; Talavera-López, Carlos; Ochaya, Stephen; Butler, Claire E; Messenger, Louisa A; Lewis, Michael D; Llewellyn, Martin S; Marinkelle, Cornelis J; Tyler, Kevin M; Miles, Michael A; +1 more... Andersson, Björn; (2012) Comparative genomic analysis of human infective Trypanosoma cruzi lineages with the bat-restricted subspecies T. cruzi marinkellei. BMC genomics, 13 (1). 531-. ISSN 1471-2164 DOI: https://doi.org/10.1186/1471-2164-13-531

Lauthier, Juan J; Tomasini, Nicolás; Barnabé, Christian; Rumi, María M Monje; D'Amato, Anahí M Alberti; Ragone, Paula G; Yeo, Matthew; Lewis, Michael D; Llewellyn, Martin S; Basombrío, Miguel A; +3 more... Miles, Michael A; Tibayrenc, Michel; Diosque, Patricio; (2012) Candidate targets for Multilocus Sequence Typing of Trypanosoma cruzi: validation using parasite stocks from the Chaco Region and a set of reference strains. Infection, genetics and evolution, 12 (2). pp. 350-358. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.12.008 Full text not available from this repository.

Messenger, Louisa A; Llewellyn, Martin S; Bhattacharyya, Tapan; Franzén, Oscar; Lewis, Michael D; Ramírez, Juan David; Carrasco, Hernan J; Andersson, Björn; Miles, Michael A; (2012) Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing. PLoS neglected tropical diseases, 6 (4). e1584-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001584

Ramírez, Juan David; Guhl, Felipe; Messenger, Louisa A; Lewis, Michael D; Montilla, Marleny; Cucunuba, Zulma; Miles, Michael A; Llewellyn, Martin S; (2012) Contemporary cryptic sexuality in Trypanosoma cruzi. Molecular ecology, 21 (17). pp. 4216-4226. ISSN 0962-1083 DOI: https://doi.org/10.1111/j.1365-294X.2012.05699.x

Zingales, Bianca; Miles, Michael A; Campbell, David A; Tibayrenc, Michel; Macedo, Andrea M; Teixeira, Marta MG; Schijman, Alejandro G; Llewellyn, Martin S; Lages-Silva, Eliane; Machado, Carlos R; +2 more... Andrade, Sonia G; Sturm, Nancy R; (2012) The revised Trypanosoma cruzi subspecific nomenclature: rationale, epidemiological relevance and research applications. Infection, genetics and evolution, 12 (2). pp. 240-253. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2011.12.009 Full text not available from this repository.

Zumaya-Estrada, Federico A; Messenger, Louisa A; Lopez-Ordonez, Teresa; Lewis, Michael D; Flores-Lopez, Carlos A; Martínez-Ibarra, Alejandro J; Pennington, Pamela M; Cordon-Rosales, Celia; Carrasco, Hernan V; Segovia, Maikel; +2 more... Miles, Michael A; Llewellyn, Martin S; (2012) North American import? Charting the origins of an enigmatic Trypanosoma cruzi domestic genotype. Parasites & vectors, 5 (1). 226-. ISSN 1756-3305 DOI: https://doi.org/10.1186/1756-3305-5-226

Franzén, Oscar; Ochaya, Stephen; Sherwood, Ellen; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; Andersson, Björn; (2011) Shotgun sequencing analysis of Trypanosoma cruzi I Sylvio X10/1 and comparison with T. cruzi VI CL Brener. PLoS neglected tropical diseases, 5 (3). e984-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000984

Hamilton, PB; Lewis, MD; Cruickshank, C; Gaunt, MW; Yeo, M; Llewellyn, MS; Valente, SA; Maia da Silva, F; Stevens, JR; Miles, MA; +1 more... Teixeira, MMG; (2011) Identification and lineage genotyping of South American trypanosomes using fluorescent fragment length barcoding. Infection, genetics and evolution, 11 (1). pp. 44-51. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2010.10.012 Full text not available from this repository.

Lewis, Michael D; Llewellyn, Martin S; Yeo, Matthew; Acosta, Nidia; Gaunt, Michael W; Miles, Michael A; (2011) Recent, independent and anthropogenic origins of Trypanosoma cruzi hybrids. PLoS neglected tropical diseases, 5 (10). e1363-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001363

Llewellyn, Martin S; Rivett-Carnac, John B; Fitzpatrick, Sinead; Lewis, Michael D; Yeo, Matthew; Gaunt, Michael W; Miles, Michael A; (2011) Extraordinary Trypanosoma cruzi diversity within single mammalian reservoir hosts implies a mechanism of diversifying selection. International journal for parasitology, 41 (6). pp. 609-614. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2010.12.004

Yeo, Matthew; Mauricio, Isabel L; Messenger, Louisa A; Lewis, Michael D; Llewellyn, Martin S; Acosta, Nidia; Bhattacharyya, Tapan; Diosque, Patricio; Carrasco, Hernan J; Miles, Michael A; (2011) Multilocus sequence typing (MLST) for lineage assignment and high resolution diversity studies in Trypanosoma cruzi. PLoS neglected tropical diseases, 5 (6). e1049-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0001049

Yoshida, Nobuko; Tyler, Kevin M; Llewellyn, Martin S; (2011) Invasion mechanisms among emerging food-borne protozoan parasites. Trends in parasitology, 27 (10). pp. 459-466. ISSN 1471-4922 DOI: https://doi.org/10.1016/j.pt.2011.06.006 Full text not available from this repository.

Bhattacharyya, Tapan; Brooks, Jessica; Yeo, Matthew; Carrasco, Hernan J; Lewis, Michael D; Llewellyn, Martin S; Miles, Michael A; (2010) Analysis of molecular diversity of the Trypanosoma cruzi trypomastigote small surface antigen reveals novel epitopes, evidence of positive selection and potential implications for lineage-specific serology. International journal for parasitology, 40 (8). pp. 921-928. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2010.01.002 Full text not available from this repository.

Ocaña-Mayorga, Sofía; Llewellyn, Martin S; Costales, Jaime A; Miles, Michael A; Grijalva, Mario J; (2010) Sex, subdivision, and domestic dispersal of Trypanosoma cruzi lineage I in southern Ecuador. PLoS neglected tropical diseases, 4 (12). e915-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000915

Lewis, Michael D; Llewellyn, Martin S; Gaunt, Michael W; Yeo, Matthew; Carrasco, Hernán J; Miles, Michael A; (2009) Flow cytometric analysis and microsatellite genotyping reveal extensive DNA content variation in Trypanosoma cruzi populations and expose contrasts between natural and experimental hybrids. International journal for parasitology, 39 (12). pp. 1305-1317. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2009.04.001

Lewis, Michael D; Ma, Jonathan; Yeo, Matthew; Carrasco, Hernán J; Llewellyn, Martin S; Miles, Michael A; (2009) Genotyping of Trypanosoma cruzi: systematic selection of assays allowing rapid and accurate discrimination of all known lineages. The American journal of tropical medicine and hygiene, 81 (6). pp. 1041-1049. ISSN 0002-9637 DOI: https://doi.org/10.4269/ajtmh.2009.09-0305

Llewellyn, Martin S; Lewis, Michael D; Acosta, Nidia; Yeo, Matthew; Carrasco, Hernan J; Segovia, Maikell; Vargas, Jorge; Torrico, Faustino; Miles, Michael A; Gaunt, Michael W; (2009) Trypanosoma cruzi IIc: phylogenetic and phylogeographic insights from sequence and microsatellite analysis and potential impact on emergent Chagas disease. PLoS neglected tropical diseases, 3 (9). e510-. ISSN 1935-2727 DOI: https://doi.org/10.1371/journal.pntd.0000510

Llewellyn, Martin S; Miles, Michael A; Carrasco, Hernan J; Lewis, Michael D; Yeo, Matthew; Vargas, Jorge; Torrico, Faustino; Diosque, Patricio; Valente, Vera; Valente, Sebastiao A; +1 more... Gaunt, Michael W; (2009) Genome-scale multilocus microsatellite typing of Trypanosoma cruzi discrete typing unit I reveals phylogeographic structure and specific genotypes linked to human infection. PLoS pathogens, 5 (5). e1000410-. ISSN 1553-7366 DOI: https://doi.org/10.1371/journal.ppat.1000410

Marcili, Arlei; Lima, Luciana; Valente, Vera C; Valente, Sebastião A; Batista, Jael S; Junqueira, Angela CV; Souza, Alda I; da Rosa, João A; Campaner, Marta; Lewis, Michael D; +3 more... Llewellyn, Martin S; Miles, Michael A; Teixeira, Marta MG; (2009) Comparative phylogeography of Trypanosoma cruzi TCIIc: new hosts, association with terrestrial ecotopes, and spatial clustering. Infection, genetics and evolution, 9 (6). pp. 1265-1274. ISSN 1567-1348 DOI: https://doi.org/10.1016/j.meegid.2009.07.003 Full text not available from this repository.

Miles, MA; Llewellyn, MS; Lewis, MD; Yeo, M; Baleela, R; Fitzpatrick, S; Gaunt, MW; Mauricio, IL; (2009) The molecular epidemiology and phylogeography of Trypanosoma cruzi and parallel research on Leishmania: looking back and to the future. Parasitology, 136 (12). pp. 1509-1528. ISSN 0031-1820 DOI: https://doi.org/10.1017/S0031182009990977

Llewellyn, MS; (2008) The molecular epidemiology of trypanosoma cruzi infection in wild and domestic transmission cycles with special emphasis on multilocus microsatellite analysis. PhD thesis, London School of Hygiene & Tropical Medicine. DOI: https://doi.org/10.17037/PUBS.04652860

Yeo, Matthew; Lewis, Michael D; Carrasco, Hernan J; Acosta, Nidia; Llewellyn, Martin; da Silva Valente, Sebastião Aldo; de Costa Valente, Vera; de Arias, Antonieta Rojas; Miles, Michael A; (2006) Resolution of multiclonal infections of Trypanosoma cruzi from naturally infected triatomine bugs and from experimentally infected mice by direct plating on a sensitive solid medium. International journal for parasitology, 37 (1). pp. 111-120. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2006.08.002 Full text not available from this repository.

Yeo, Matthew; Acosta, Nidia; Llewellyn, Martin; Sánchez, Humberto; Adamson, Susie; Miles, Graham AJ; López, Elsa; González, Nilsa; Patterson, James S; Gaunt, Michael W; +2 more... de Arias, Antonieta Rojas; Miles, Michael A; (2005) Origins of Chagas disease: Didelphis species are natural hosts of Trypanosoma cruzi I and armadillos hosts of Trypanosoma cruzi II, including hybrids. International journal for parasitology, 35 (2). pp. 225-233. ISSN 0020-7519 DOI: https://doi.org/10.1016/j.ijpara.2004.10.024 Full text not available from this repository.

Kassen, Rees; Llewellyn, Martin; Rainey, Paul B; (2004) Ecological constraints on diversification in a model adaptive radiation. Nature, 431 (7011). pp. 984-988. ISSN 0028-0836 DOI: https://doi.org/10.1038/nature02923 Full text not available from this repository.